Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.1e-228 796.2 375 100.0
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 9.2e-127 457.6 376 58.5
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 2.9e-112 409.5 342 54.7
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 2.9e-112 409.5 337 54.0
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 3.7e-112 409.1 356 52.2
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 6.4e-112 408.3 342 54.7
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 1.4e-111 407.1 342 54.1
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 2.4e-111 406.4 342 53.2
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 2.4e-111 406.4 342 53.2
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 4.1e-111 405.6 376 51.3
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 4.1e-111 405.6 342 54.4
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 1.2e-110 404.1 376 50.5
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.1e-110 403.3 342 53.5
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 2.7e-110 402.9 342 53.8
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 2.7e-110 402.9 342 53.5
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 2.7e-110 402.9 342 54.1
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 3.5e-110 402.5 375 50.4
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 4.6e-110 402.1 342 53.5
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 4.6e-110 402.1 342 53.2
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 4.6e-110 402.1 376 49.5
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 6.0e-110 401.7 342 53.5
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 7.8e-110 401.4 342 52.0
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 7.8e-110 401.4 342 52.6
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.0e-109 401.0 355 51.0
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 1.0e-109 401.0 342 53.5
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 1.3e-109 400.6 342 52.0
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 1.3e-109 400.6 342 52.3
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 1.3e-109 400.6 341 53.1
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.7e-109 400.2 342 53.5
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 1.7e-109 400.2 342 53.5
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 1.7e-109 400.2 342 52.0
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 1.7e-109 400.2 339 53.4
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 1.7e-109 400.2 346 50.9
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 2.3e-109 399.8 361 50.7
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 2.3e-109 399.8 342 52.9
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 2.3e-109 399.8 346 50.9
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 3.0e-109 399.4 342 51.5
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 3.0e-109 399.4 342 52.6
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 5.1e-109 398.7 336 53.0
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 6.6e-109 398.3 385 49.6
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 6.6e-109 398.3 384 48.7
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 8.6e-109 397.9 342 51.8
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 1.5e-108 397.1 344 52.9
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 1.9e-108 396.7 336 53.3
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 1.9e-108 396.7 342 51.8
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 1.9e-108 396.7 342 53.2
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 1.9e-108 396.7 336 52.1
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 4.3e-108 395.6 385 49.4
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 7.3e-108 394.8 342 51.2
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 7.3e-108 394.8 342 52.0
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 9.6e-108 394.4 342 52.0
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 9.6e-108 394.4 385 49.4
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 9.6e-108 394.4 334 52.1
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 1.2e-107 394.0 337 52.5
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 1.2e-107 394.0 336 51.8
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.2e-107 394.0 375 48.8
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 1.2e-107 394.0 339 52.5
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 1.6e-107 393.7 342 51.2
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 2.1e-107 393.3 355 50.7
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 2.1e-107 393.3 380 49.7
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 2.8e-107 392.9 343 52.2
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 2.8e-107 392.9 343 52.2
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 2.8e-107 392.9 342 51.8
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 2.8e-107 392.9 338 52.1
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 2.8e-107 392.9 357 49.9
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 3.6e-107 392.5 336 52.1
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 3.6e-107 392.5 344 52.9
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 4.7e-107 392.1 342 52.0
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 4.7e-107 392.1 342 52.3
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 4.7e-107 392.1 336 52.4
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 4.7e-107 392.1 342 51.8
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 6.2e-107 391.7 342 50.9
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 6.2e-107 391.7 336 52.1
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 6.2e-107 391.7 336 51.8
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 8.1e-107 391.3 380 49.7
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 1.1e-106 391.0 342 52.3
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.4e-106 390.6 336 51.8
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 1.4e-106 390.6 342 52.3
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.4e-106 390.6 342 52.0
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 1.8e-106 390.2 342 51.8
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 2.4e-106 389.8 343 51.6
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 2.4e-106 389.8 383 48.3
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 3.1e-106 389.4 342 50.9
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 3.1e-106 389.4 342 52.0
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 3.1e-106 389.4 342 51.8
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 3.1e-106 389.4 336 52.1
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 4.0e-106 389.0 336 51.2
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 4.0e-106 389.0 339 51.9
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 5.2e-106 388.7 343 51.6
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 5.2e-106 388.7 348 50.9
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 6.8e-106 388.3 336 51.2
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 8.9e-106 387.9 383 48.3
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 1.5e-105 387.1 342 50.3
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 2.0e-105 386.7 342 51.5
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 2.0e-105 386.7 342 50.3
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 2.6e-105 386.3 342 51.8
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 2.6e-105 386.3 336 50.6
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 3.4e-105 386.0 341 51.3
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 4.4e-105 385.6 339 51.3
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 4.4e-105 385.6 351 50.1
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 4.4e-105 385.6 342 50.3
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 5.8e-105 385.2 342 51.5
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 5.8e-105 385.2 342 50.3
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 7.6e-105 384.8 339 50.4
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 9.9e-105 384.4 336 51.2
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 1.3e-104 384.0 374 48.7
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 1.7e-104 383.6 342 50.6
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 3.8e-104 382.5 342 49.7
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 1.9e-103 380.2 344 50.6
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 3.0e-101 372.9 337 51.6
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 6.6e-101 371.7 336 50.0
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.1e-100 370.9 320 53.4
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 1.5e-100 370.5 344 49.1
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 3.3e-100 369.4 318 51.3
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 4.3e-100 369.0 319 50.8
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 9.6e-100 367.9 399 45.1
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 9.6e-100 367.9 330 50.6
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 1.6e-99 367.1 377 46.9
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 1.4e-98 364.0 318 50.3
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 1.8e-98 363.6 412 43.0
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 3.1e-98 362.8 336 50.0
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 4.0e-98 362.5 318 49.7
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 2.6e-97 359.8 337 49.3
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 2.4e-95 353.2 315 50.5
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 2.4e-95 353.2 345 47.8
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 5.4e-95 352.1 288 52.8
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 4.3e-92 342.4 343 48.1
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 1.6e-91 340.5 290 53.1
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 7.6e-89 331.6 285 53.3
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 2.9e-88 329.7 290 51.4
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 4.9e-88 328.9 290 52.1
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 4.9e-88 328.9 290 50.3
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 2.9e-80 303.1 268 52.2
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 1.1e-76 291.2 251 52.6
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.6e-75 287.3 259 51.7
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 3.7e-67 259.6 212 55.2
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 4.5e-65 252.7 203 56.2
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.3e-64 251.1 208 54.8
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 2.6e-52 210.3 199 50.3
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 1.4e-34 151.4 135 47.4
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 3.1e-34 150.2 176 43.8
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 4.5e-33 146.4 139 44.6
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 5.2e-29 132.9 119 52.1
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 7.5e-28 129.0 118 45.8
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 1.0e-24 118.6 127 45.7
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 6.6e-24 115.9 120 40.0
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 7.8e-17 92.4 91 51.6
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 7.3e-15 85.9 84 45.2
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.6e-14 84.7 84 44.0
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 3.1e-13 80.5 99 41.4


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