Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 4.5e-210 734.6 434 100.0
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 3.9e-44 183.3 239 41.4
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 5.1e-44 183.0 242 43.4
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 8.6e-44 182.2 249 41.0
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 8.6e-44 182.2 310 36.8
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.9e-43 181.0 240 41.2
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.9e-43 181.0 241 41.9
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.5e-43 180.6 242 42.6
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 1.6e-42 177.9 234 41.9
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 2.1e-42 177.6 234 44.9
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 2.1e-42 177.6 236 41.5
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 3.6e-42 176.8 240 41.7
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 3.6e-42 176.8 253 39.9
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 4.7e-42 176.4 236 41.1
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 8.1e-42 175.6 252 42.5
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 1.1e-41 175.3 276 39.5
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.1e-41 175.3 241 40.2
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.3e-41 174.1 250 41.2
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 3.1e-41 173.7 223 45.3
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 3.1e-41 173.7 222 45.5
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 6.8e-41 172.6 215 44.7
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 8.9e-41 172.2 235 42.1
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 1.7e-39 167.9 287 36.2
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.9e-39 167.2 223 42.6
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 3.7e-39 166.8 242 42.1
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.1e-38 165.2 230 41.3
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.4e-38 164.9 310 35.2
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.9e-38 164.5 218 40.8
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.4e-38 164.1 233 40.3
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 2.1e-37 161.0 218 42.7
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 2.7e-37 160.6 218 42.7
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 4.6e-37 159.8 283 36.7
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 6.0e-37 159.5 240 37.9
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 7.8e-37 159.1 257 37.4
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.0e-36 158.7 210 42.9
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.0e-36 158.7 237 39.7
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.7e-36 157.9 234 40.6
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.7e-36 157.9 206 43.7
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 1.7e-36 157.9 216 43.5
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 5.1e-36 156.4 199 46.7
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 8.6e-36 155.6 225 42.2
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.1e-35 155.2 237 38.0
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.3e-35 153.7 206 42.7
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 4.3e-35 153.3 223 41.3
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 4.3e-35 153.3 223 41.3
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 5.6e-35 152.9 205 44.9
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 7.3e-35 152.5 250 36.0
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.3e-35 152.5 269 34.9
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 9.6e-35 152.1 171 48.0
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.6e-34 151.4 228 39.9
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.6e-34 151.4 225 38.2
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 2.8e-34 150.6 233 39.5
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 2.8e-34 150.6 298 36.6
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.8e-34 150.6 218 42.7
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 2.8e-34 150.6 306 36.3
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 3.6e-34 150.2 207 41.1
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 6.2e-34 149.4 220 42.3
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 8.1e-34 149.1 242 38.8
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 8.1e-34 149.1 229 38.0
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.1e-33 148.7 218 42.2
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.8e-33 147.9 217 39.6
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 3.1e-33 147.1 191 42.4
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 4.0e-33 146.7 211 39.3
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 5.2e-33 146.4 229 39.3
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 5.2e-33 146.4 190 41.6
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 8.9e-33 145.6 215 40.9
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 8.9e-33 145.6 198 41.9
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 8.9e-33 145.6 324 34.9
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.2e-32 145.2 224 38.4
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 1.5e-32 144.8 223 40.8
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.5e-32 144.8 297 36.0
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.0e-32 144.4 208 41.3
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 2.0e-32 144.4 190 43.2
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 2.6e-32 144.1 188 45.7
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.6e-32 144.1 302 35.1
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 3.4e-32 143.7 226 38.5
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 4.4e-32 143.3 291 35.7
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 5.8e-32 142.9 243 41.6
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 5.8e-32 142.9 190 45.8
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 9.9e-32 142.1 231 39.8
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 1.7e-31 141.4 192 43.2
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.7e-31 141.4 192 43.2
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.7e-31 141.4 216 40.7
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.9e-31 140.6 194 43.8
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 3.8e-31 140.2 227 39.2
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 4.9e-31 139.8 306 33.0
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 4.9e-31 139.8 210 40.5
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 4.9e-31 139.8 228 42.1
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 6.4e-31 139.4 264 34.8
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.4e-30 138.3 260 37.3
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.9e-30 137.9 255 39.2
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.4e-30 137.5 185 42.7
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 3.2e-30 137.1 207 40.6
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 4.2e-30 136.7 218 41.3
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 4.2e-30 136.7 191 42.9
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 7.1e-30 136.0 225 38.7
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 7.1e-30 136.0 214 39.3
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 9.3e-30 135.6 302 33.8
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 7.8e-29 132.5 209 39.7
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.3e-28 131.7 196 40.8
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 2.3e-28 131.0 244 36.9
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 3.0e-28 130.6 198 40.4
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.9e-27 127.9 249 36.5
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.6e-26 124.8 158 43.0
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 4.0e-25 120.2 176 41.5
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.5e-24 118.2 188 39.9
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 4.4e-24 116.7 165 43.0
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 4.4e-24 116.7 231 32.5
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 6.4e-23 112.8 206 37.9
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.5e-19 101.7 154 39.0
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.1e-17 95.5 91 53.8
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.5e-11 75.1 59 62.7
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 9.6e-11 72.4 167 30.5
PRCOL_00004793 Prasinoderma coloniale HOM05D002428 ORTHO05D008664 1.3e-10 72.0 137 32.1
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.2e-08 65.5 184 28.8
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.7e-07 61.6 54 53.7


User provided reference genes

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