Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0045 Selaginella moellendorffii HOM05D033049 ORTHO05D050904 0.0e+00 1139.4 587 100.0
SEGI_01975 Sequoiadendron giganteum HOM05D033049 ORTHO05D050904 2.3e-39 167.9 558 27.1
ECA240G4379 Erigeron canadensis HOM05D000361 ORTHO05D008190 7.6e-11 73.2 401 26.2
Potri.019G014403 Populus trichocarpa HOM05D000361 ORTHO05D008190 2.9e-10 71.2 402 25.1
Lsat_1_v5_gn_9_116821 Lactuca sativa HOM05D000361 ORTHO05D008190 1.4e-09 68.9 391 25.6
AUR62010162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 1.9e-09 68.6 404 25.2
Zm00001eb279300 Zea mays HOM05D000361 ORTHO05D008190 1.9e-09 68.6 399 25.6
Manes.10G104300 Manihot esculenta HOM05D000361 ORTHO05D008190 2.5e-09 68.2 453 24.9
Aqoxy6G00715 Aquilegia oxysepala HOM05D000361 ORTHO05D008190 3.2e-09 67.8 402 25.4
EL10Ac9g21521 Beta vulgaris HOM05D000361 ORTHO05D008190 3.2e-09 67.8 437 23.8
DCAR_021877 Daucus carota HOM05D000361 ORTHO05D008190 3.2e-09 67.8 406 24.9
FAN27G0220 Fragaria x ananassa HOM05D000361 ORTHO05D008190 4.2e-09 67.4 388 26.0
HanXRQChr03g0067551 Helianthus annuus HOM05D000361 ORTHO05D008190 4.2e-09 67.4 402 25.9
CiPaw.05G032700 Carya illinoinensis HOM05D000361 ORTHO05D008190 5.5e-09 67.0 400 24.8
TAR376G0717 Trochodendron aralioides HOM05D000361 ORTHO05D008190 5.5e-09 67.0 294 25.9
MSTRG.20289 Avicennia marina HOM05D000361 ORTHO05D008190 9.3e-09 66.2 402 24.4
SGA_v2.0_scaffold83G26335 Striga asiatica HOM05D000361 ORTHO05D008190 1.2e-08 65.9 402 25.1
RcHm_v2.0_Chr6g0267231 Rosa chinensis HOM05D000361 ORTHO05D008190 1.6e-08 65.5 406 24.4
Migut.B00581 Erythranthe guttata HOM05D000361 ORTHO05D008190 2.1e-08 65.1 402 24.9
FvH4_2g10130 Fragaria vesca HOM05D000361 ORTHO05D008190 2.1e-08 65.1 402 24.6
MD05G1047800 Malus domestica HOM05D000361 ORTHO05D008190 2.7e-08 64.7 402 25.4
Hund00081 Selenicereus undatus HOM05D000361 ORTHO05D008190 2.7e-08 64.7 293 25.9
CARHR104240 Cardamine hirsuta HOM05D000361 ORTHO05D008190 3.5e-08 64.3 401 24.9
Sabra19G0028800 Salix brachista HOM05D000361 ORTHO05D008190 3.5e-08 64.3 292 26.4
Pp3c8_2220 Physcomitrium patens HOM05D000361 ORTHO05D008190 4.6e-08 63.9 406 25.6
CsaV3_7G006750 Cucumis sativus L. HOM05D000361 ORTHO05D008190 7.9e-08 63.2 403 26.1
FAN15G1148 Fragaria x ananassa HOM05D000361 ORTHO05D008190 7.9e-08 63.2 406 24.6
AUR62013162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 1.0e-07 62.8 293 25.6
FAN24G1062 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.0e-07 62.8 294 26.2
Carub.0003s2831 Capsella rubella HOM05D000361 ORTHO05D008190 1.3e-07 62.4 402 24.6
AagrBONN_evm.TU.Sc2ySwM_228.3455 Anthoceros agrestis HOM05D000361 ORTHO05D008190 1.8e-07 62.0 411 25.5
COL.COLO4_32315 Corchorus olitorius HOM05D000361 ORTHO05D008190 1.8e-07 62.0 399 24.8
Nn5g29999 Nelumbo nucifera HOM05D000361 ORTHO05D008190 1.8e-07 62.0 294 25.5
Sc08g0003720 Simmondsia chinensis HOM05D000361 ORTHO05D008190 1.8e-07 62.0 293 26.3
Aa31LG8G12490 Aethionema arabicum HOM05D000361 ORTHO05D008190 2.3e-07 61.6 402 23.9
Hma1.2p1_0784F.1_g217180 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 2.3e-07 61.6 407 24.3
Prupe.8G065100 Prunus persica HOM05D000361 ORTHO05D008190 2.3e-07 61.6 402 24.9
Sp3g27310 Schrenkiella parvula HOM05D000361 ORTHO05D008190 2.3e-07 61.6 402 24.1
CAN.G523.41 Capsicum annuum HOM05D000361 ORTHO05D008190 3.0e-07 61.2 400 24.8
Atru.chr6.1214 Acer truncatum HOM05D000361 ORTHO05D008190 3.9e-07 60.8 292 26.4
ATR0684G185 Amborella trichopoda HOM05D000361 ORTHO05D008190 3.9e-07 60.8 298 26.5
CSS0016473 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008190 3.9e-07 60.8 296 27.0
SMO013G0030 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 3.9e-07 60.8 328 27.7
Sopen01g047990 Solanum pennellii HOM05D000361 ORTHO05D008190 3.9e-07 60.8 400 24.8
Ah.01g010080 Amaranthus hybridus HOM05D000361 ORTHO05D008190 5.1e-07 60.5 294 25.2
Ciclev10029860m.g Citrus clementina HOM05D000361 ORTHO05D008190 5.1e-07 60.5 409 24.4
PSO541G0659 Papaver somniferum HOM05D000361 ORTHO05D008190 5.1e-07 60.5 294 26.2
PSO541G1218 Papaver somniferum HOM05D000361 ORTHO05D008190 5.1e-07 60.5 294 26.2
PGR142G0624 Punica granatum HOM05D000361 ORTHO05D008190 5.1e-07 60.5 403 25.6
RhsimUnG0187700 Rhododendron simsii HOM05D000361 ORTHO05D008190 5.1e-07 60.5 405 24.2
Thecc.02G134000 Theobroma cacao HOM05D000361 ORTHO05D008190 5.1e-07 60.5 294 26.2
C03p55990 Brassica napus HOM05D000361 ORTHO05D008190 6.7e-07 60.1 293 25.9
BolC3t17883H Brassica oleracea HOM05D000361 ORTHO05D008190 6.7e-07 60.1 293 25.9
Mapoly0080s0056 Marchantia polymorpha HOM05D000361 ORTHO05D008190 6.7e-07 60.1 293 25.9
Sed0008836 Sechium edule HOM05D000361 ORTHO05D008190 6.7e-07 60.1 417 24.5
AT2G14050 Arabidopsis thaliana HOM05D000361 ORTHO05D008190 8.7e-07 59.7 402 24.1
Duzib052G0813 Durio zibethinus HOM05D003001 ORTHO05D008190 8.7e-07 59.7 293 26.3
Thhalv10022581m.g Eutrema salsugineum HOM05D000361 ORTHO05D008190 8.7e-07 59.7 294 25.2
Lj6g0015129 Lotus japonicus HOM05D000361 ORTHO05D008190 8.7e-07 59.7 400 25.0
Psat1g215840 Pisum sativum HOM05D000361 ORTHO05D008190 8.7e-07 59.7 401 24.9
Actinidia24006 Actinidia chinensis HOM05D000361 ORTHO05D008190 1.1e-06 59.3 293 26.6
Gohir.D12G016300 Gossypium hirsutum HOM05D000361 ORTHO05D008190 1.1e-06 59.3 293 26.6
BcaB08g34549 Brassica carinata HOM05D000361 ORTHO05D008190 1.5e-06 58.9 293 25.9
A03p45130 Brassica napus HOM05D000361 ORTHO05D008190 1.5e-06 58.9 293 25.9
BraA03t13648Z Brassica rapa HOM05D000361 ORTHO05D008190 1.5e-06 58.9 293 25.9
Ca_00146_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008190 1.5e-06 58.9 399 25.1
ClCG09G015670 Citrullus lanatus HOM05D000361 ORTHO05D008190 1.5e-06 58.9 297 27.6
Gohir.A12G016000 Gossypium hirsutum HOM05D000361 ORTHO05D008190 1.9e-06 58.5 294 25.9
TWI14G0190 Tripterygium wilfordii HOM05D000361 ORTHO05D008190 1.9e-06 58.5 294 25.5
GSVIVG01022631001 Vitis vinifera HOM05D000361 ORTHO05D008190 1.9e-06 58.5 297 25.3
RhsimUnG0105100 Rhododendron simsii HOM05D000361 ORTHO05D008190 2.5e-06 58.2 297 25.6
PSO675G7150 Papaver somniferum HOM05D000361 ORTHO05D008190 3.3e-06 57.8 294 24.8
Cc02_g21180 Coffea canephora HOM05D000361 ORTHO05D008190 4.3e-06 57.4 294 25.5
THA.LOC104819509 Tarenaya hassleriana HOM05D000361 ORTHO05D008190 4.3e-06 57.4 294 25.5
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 4.3e-06 57.4 295 26.8
Cre12.g556550 Chlamydomonas reinhardtii HOM05D033049 ORTHO05D140496 5.7e-06 57.0 233 28.8
Phvul.006G204900 Phaseolus vulgaris HOM05D000361 ORTHO05D008190 5.7e-06 57.0 397 24.9


User provided reference genes

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