Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 0.0e+00 1244.6 663 100.0
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 8.3e-38 162.9 291 36.4
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.4e-37 162.2 252 41.3
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 5.9e-36 156.8 257 39.3
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 1.5e-34 152.1 207 43.0
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.9e-34 151.8 207 44.9
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 4.2e-34 150.6 241 41.5
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 5.5e-34 150.2 207 43.0
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.2e-33 149.1 209 43.1
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 1.6e-33 148.7 208 43.8
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 1.6e-33 148.7 261 38.3
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.6e-33 148.7 237 37.1
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.6e-33 148.7 267 36.3
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.6e-33 148.7 267 36.3
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 2.1e-33 148.3 207 44.0
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 2.8e-33 147.9 208 42.8
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 3.6e-33 147.5 207 44.0
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 4.7e-33 147.1 207 42.5
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 1.0e-32 146.0 207 42.5
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 1.0e-32 146.0 207 41.1
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.0e-32 146.0 207 43.5
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 1.4e-32 145.6 267 36.0
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.4e-32 145.6 207 41.5
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.4e-32 145.6 200 44.5
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.4e-32 145.6 207 43.0
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 2.3e-32 144.8 254 36.6
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 3.0e-32 144.4 207 43.0
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 3.0e-32 144.4 207 42.0
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 4.0e-32 144.1 207 42.0
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 4.0e-32 144.1 207 42.5
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 6.8e-32 143.3 205 42.9
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 6.8e-32 143.3 208 41.8
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.2e-31 142.5 207 41.5
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 2.0e-31 141.7 203 42.4
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 2.0e-31 141.7 207 42.0
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.6e-31 141.4 207 41.5
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 4.4e-31 140.6 252 36.5
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 5.7e-31 140.2 232 40.5
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 5.7e-31 140.2 210 39.0
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 5.7e-31 140.2 210 41.9
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 5.7e-31 140.2 383 32.1
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 7.5e-31 139.8 207 42.0
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 7.5e-31 139.8 208 41.3
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 9.8e-31 139.4 269 34.9
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 9.8e-31 139.4 209 42.1
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 9.8e-31 139.4 235 38.7
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.3e-30 139.0 207 42.0
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.3e-30 139.0 207 42.0
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.7e-30 138.7 200 44.0
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.2e-30 138.3 203 42.4
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 2.8e-30 137.9 207 44.0
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 2.8e-30 137.9 309 32.7
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 3.7e-30 137.5 207 40.6
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 4.9e-30 137.1 213 40.8
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 4.9e-30 137.1 207 42.5
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 4.9e-30 137.1 207 41.1
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 6.3e-30 136.7 204 42.6
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 6.3e-30 136.7 207 41.5
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 6.3e-30 136.7 207 43.0
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 8.3e-30 136.3 207 42.0
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 8.3e-30 136.3 207 42.0
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 8.3e-30 136.3 207 41.5
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 8.3e-30 136.3 438 26.7
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.3e-30 136.3 207 43.0
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 1.1e-29 136.0 200 42.0
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.1e-29 136.0 209 42.6
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.1e-29 136.0 207 41.5
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 1.4e-29 135.6 207 40.1
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.4e-29 135.6 208 39.9
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.4e-29 135.6 209 41.6
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.4e-29 135.6 207 40.6
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.8e-29 135.2 210 39.5
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 2.4e-29 134.8 200 41.5
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.4e-29 134.8 240 37.9
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.4e-29 134.8 459 30.1
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 3.1e-29 134.4 207 41.1
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.1e-29 134.4 200 41.5
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.1e-29 134.4 211 40.3
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 3.1e-29 134.4 210 41.9
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 4.1e-29 134.0 207 41.1
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 4.1e-29 134.0 200 40.5
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 5.4e-29 133.7 200 38.0
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 5.4e-29 133.7 207 39.6
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 5.4e-29 133.7 208 39.4
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 5.4e-29 133.7 207 40.1
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 5.4e-29 133.7 210 39.5
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 5.4e-29 133.7 209 40.7
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 7.0e-29 133.3 207 39.6
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 9.2e-29 132.9 507 27.6
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 9.2e-29 132.9 207 39.6
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 9.2e-29 132.9 212 41.0
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 1.2e-28 132.5 209 41.1
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.2e-28 132.5 207 40.6
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.2e-28 132.5 200 40.0
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.6e-28 132.1 211 41.2
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 1.6e-28 132.1 207 40.6
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 2.0e-28 131.7 209 40.7
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 2.0e-28 131.7 219 40.2
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 2.0e-28 131.7 207 41.5
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 3.5e-28 131.0 201 40.8
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 3.5e-28 131.0 200 40.5
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.5e-28 131.0 207 41.5
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 4.5e-28 130.6 202 39.6
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 4.5e-28 130.6 208 39.4
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 4.5e-28 130.6 206 36.9
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 5.9e-28 130.2 203 39.4
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.0e-27 129.4 200 40.0
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 1.0e-27 129.4 208 38.5
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.0e-27 129.4 211 40.8
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.0e-27 129.4 200 40.5
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.3e-27 129.0 210 39.5
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.3e-27 129.0 209 40.2
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.3e-27 129.0 200 40.0
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 1.7e-27 128.6 531 30.3
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 3.8e-27 127.5 512 28.3
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 3.8e-27 127.5 205 39.5
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 6.6e-27 126.7 512 28.9
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 6.6e-27 126.7 202 40.1
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 8.6e-27 126.3 201 40.3
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.6e-27 126.3 199 41.7
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.1e-26 125.9 210 39.0
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 1.5e-26 125.6 208 38.9
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.5e-26 125.6 522 31.2
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-26 125.6 205 37.6
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-26 125.6 205 37.6
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.9e-26 125.2 257 36.6
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.9e-26 125.2 200 39.5
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 2.5e-26 124.8 205 40.5
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 3.3e-26 124.4 537 30.7
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 3.3e-26 124.4 204 41.7
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 3.3e-26 124.4 202 37.1
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.3e-26 124.0 205 37.1
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 7.3e-26 123.2 209 37.8
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 9.5e-26 122.9 207 39.6
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.2e-25 122.5 210 38.1
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 2.1e-25 121.7 207 39.1
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.1e-25 120.2 205 36.1
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.1e-24 117.9 207 38.6
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 4.0e-24 117.5 206 38.3
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 2.6e-23 114.8 260 35.8
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 7.5e-23 113.2 518 30.5
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 3.7e-22 110.9 261 30.7
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 4.9e-22 110.5 218 34.4
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 6.4e-22 110.2 203 36.5
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 1.9e-21 108.6 215 37.2
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 2.7e-20 104.8 167 41.9
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.7e-20 104.8 199 35.7
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 3.3e-18 97.8 167 38.9
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 2.1e-17 95.1 180 33.3
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 4.7e-17 94.0 198 33.3
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.1e-16 92.8 135 35.6
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.8e-16 92.0 676 25.4
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 8.9e-16 89.7 207 33.3
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 2.6e-15 88.2 216 32.4
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.9e-13 82.0 157 36.9
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.0e-13 80.1 144 41.7
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 7.3e-10 70.1 165 33.9
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-07 62.8 138 33.3
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.5e-07 62.4 66 50.0
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.5e-07 62.4 85 44.7
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 7.5e-07 60.1 119 37.0
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 8.3e-06 56.6 67 43.3


User provided reference genes

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