Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0645 Selaginella moellendorffii HOM05D003732 ORTHO05D030126 8.7e-75 283.5 138 100.0
SMO340G0035 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 6.7e-59 230.7 171 71.3
SMO067G0006 Selaginella moellendorffii HOM05D003732 ORTHO05D030126 6.3e-49 197.6 137 74.5
Pp3c21_14810 Physcomitrium patens HOM05D003732 ORTHO05D004965 5.7e-26 121.3 105 60.0
Pp3c5_23300 Physcomitrium patens HOM05D003732 ORTHO05D004965 8.3e-25 117.5 99 50.5
Mapoly0065s0061 Marchantia polymorpha HOM05D049285 ORTHO05D030126 2.4e-24 115.9 143 48.3
SMO239G0017 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 7.0e-24 114.4 102 55.9
Mapoly0071s0075 Marchantia polymorpha HOM05D003732 ORTHO05D004965 2.7e-23 112.5 98 50.0
Mapoly0073s0049 Marchantia polymorpha HOM05D003732 ORTHO05D004965 2.7e-23 112.5 98 51.0
SMO118G0022 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 3.5e-23 112.1 101 49.5
SMO358G0103 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 6.1e-20 101.3 97 49.5
Mapoly2449s0001 Marchantia polymorpha HOM05D003732 ORTHO05D004965 8.0e-20 100.9 90 55.6
SMO358G0184 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 1.4e-19 100.1 97 47.4
AagrBONN_evm.TU.Sc2ySwM_117.3460 Anthoceros agrestis HOM05D003732 ORTHO05D004965 6.4e-17 91.3 90 43.3
Pp3c1_40480 Physcomitrium patens HOM05D003732 ORTHO05D004965 3.2e-16 89.0 100 41.0
SMO358G0684 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 7.0e-16 87.8 97 42.3
SMO234G0044 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 9.2e-16 87.4 95 46.3
SMO196G0264 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 7.8e-15 84.3 111 42.3
AagrBONN_evm.TU.Sc2ySwM_117.955 Anthoceros agrestis HOM05D003732 ORTHO05D004965 9.5e-13 77.4 97 36.1
Cre11.g476550 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 8.1e-12 74.3 98 38.8
SMO361G0102 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 4.4e-10 68.6 58 67.2
AagrBONN_evm.TU.Sc2ySwM_344.1470 Anthoceros agrestis HOM05D003732 ORTHO05D004965 5.8e-10 68.2 108 35.2
Mapoly0218s0009 Marchantia polymorpha HOM05D003732 ORTHO05D004965 7.5e-10 67.8 109 33.9
CBR_g29478 Chara braunii HOM05D003732 ORTHO05D004965 9.8e-10 67.4 108 36.1
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 7.8e-07 57.8 107 32.7
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 7.8e-07 57.8 108 32.4
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 3.9e-06 55.5 108 33.3
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 5.1e-06 55.1 108 32.4
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 5.1e-06 55.1 108 32.4
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 5.1e-06 55.1 108 32.4
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 6.6e-06 54.7 108 32.4


User provided reference genes

Program Settings