Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0638 Selaginella moellendorffii HOM05D007521 ORTHO05D009387 3.9e-122 441.4 216 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2023 Anthoceros agrestis HOM05D007521 ORTHO05D009387 2.0e-25 120.2 177 42.4
Nitab4.5_0011372g0030 Nicotiana tabacum HOM05D007521 ORTHO05D009387 2.0e-25 120.2 210 34.8
Pp3c3_11210 Physcomitrium patens HOM05D007521 ORTHO05D009387 3.4e-25 119.4 180 42.2
PSO384G1785 Papaver somniferum HOM05D007521 ORTHO05D009387 4.9e-24 115.5 186 39.8
Mapoly0070s0078 Marchantia polymorpha HOM05D007521 ORTHO05D009387 6.4e-24 115.2 185 39.5
PGSC0003DMG400011658 Solanum tuberosum HOM05D007521 ORTHO05D009387 6.4e-24 115.2 210 34.8
Nitab4.5_0000375g0330 Nicotiana tabacum HOM05D007521 ORTHO05D009387 5.5e-23 112.1 222 34.2
ATR1127G230 Amborella trichopoda HOM05D007521 ORTHO05D009387 9.3e-23 111.3 182 40.1
Nn2g10221 Nelumbo nucifera HOM05D007521 ORTHO05D009387 2.1e-22 110.2 193 36.3
HanXRQChr08g0223011 Helianthus annuus HOM05D007521 ORTHO05D009387 1.3e-21 107.5 187 36.4
Migut.F00560 Erythranthe guttata HOM05D007521 ORTHO05D009387 2.3e-21 106.7 207 33.8
Lsat_1_v5_gn_8_11100 Lactuca sativa HOM05D007521 ORTHO05D009387 3.9e-21 105.9 170 39.4
PSO339G2910 Papaver somniferum HOM05D007521 ORTHO05D009387 3.9e-21 105.9 186 37.6
Actinidia31757 Actinidia chinensis HOM05D007521 ORTHO05D009387 5.1e-21 105.5 178 36.5
Aqoxy4G03316 Aquilegia oxysepala HOM05D007521 ORTHO05D009387 5.1e-21 105.5 178 37.6
ECA233G6052 Erigeron canadensis HOM05D007521 ORTHO05D009387 5.1e-21 105.5 163 39.9
RcHm_v2.0_Chr1g0372781 Rosa chinensis HOM05D007521 ORTHO05D009387 5.1e-21 105.5 194 36.1
TAR636G2090 Trochodendron aralioides HOM05D007521 ORTHO05D009387 5.1e-21 105.5 211 34.6
GSVIVG01032870001 Vitis vinifera HOM05D007521 ORTHO05D009387 8.7e-21 104.8 218 33.9
TWI09G0709 Tripterygium wilfordii HOM05D007521 ORTHO05D009387 1.5e-20 104.0 183 35.0
Sc11g0006120 Simmondsia chinensis HOM05D007521 ORTHO05D009387 3.3e-20 102.8 187 35.8
FAN10G3062 Fragaria x ananassa HOM05D007521 ORTHO05D009387 1.6e-19 100.5 192 35.4
vmacro09945 Vaccinium macrocarpon HOM05D006307 ORTHO05D008123 1.6e-19 100.5 207 31.9
MSTRG.8869 Avicennia marina HOM05D007521 ORTHO05D009387 2.8e-19 99.8 210 33.3
Cc02_g05020 Coffea canephora HOM05D007521 ORTHO05D009387 3.7e-19 99.4 182 36.3
CANSAT56G2803 Cannabis sativa HOM05D007521 ORTHO05D009387 4.8e-19 99.0 183 35.5
MD07G1238600 Malus domestica HOM05D007521 ORTHO05D009387 4.8e-19 99.0 210 33.3
Prupe.2G267400 Prunus persica HOM05D007521 ORTHO05D009387 4.8e-19 99.0 192 35.9
Medtr3g093540 Medicago truncatula HOM05D007521 ORTHO05D009387 8.1e-19 98.2 198 35.4
Cc02_g04870 Coffea canephora HOM05D007521 ORTHO05D009387 1.1e-18 97.8 183 36.6
FvH4_7g26320 Fragaria vesca HOM05D007521 ORTHO05D009387 1.1e-18 97.8 192 34.9
PGR142G4361 Punica granatum HOM05D007521 ORTHO05D009387 1.1e-18 97.8 189 37.0
TPR.G13979 Trifolium pratense HOM05D007521 ORTHO05D009387 1.1e-18 97.8 214 31.8
Dinv34514 Davidia involucrata HOM05D007521 ORTHO05D009387 1.4e-18 97.4 203 33.0
unitig_37.g11916 Utricularia gibba HOM05D007521 ORTHO05D009387 1.4e-18 97.4 203 33.0
CDE11G1245 Ceratophyllum demersum HOM05D007521 ORTHO05D009387 1.8e-18 97.1 151 38.4
Psat5g070120 Pisum sativum HOM05D007521 ORTHO05D009387 6.9e-18 95.1 184 37.5
arahy.Tifrunner.gnm1.ann1.Q2LGCQ Arachis hypogaea HOM05D007521 ORTHO05D009387 1.5e-17 94.0 203 33.5
CiPaw.08G156100 Carya illinoinensis HOM05D007521 ORTHO05D009387 1.5e-17 94.0 204 33.3
Lj1g0021108 Lotus japonicus HOM05D007521 ORTHO05D009387 3.4e-17 92.8 188 34.6
Gohir.A05G276700 Gossypium hirsutum HOM05D007521 ORTHO05D009387 4.5e-17 92.4 225 32.4
EL10Ac2g02694 Beta vulgaris HOM05D007521 ORTHO05D009387 7.6e-17 91.7 178 36.0
Gorai.009G291900 Gossypium raimondii HOM05D007521 ORTHO05D009387 7.6e-17 91.7 226 33.2
Thecc.10G187600 Theobroma cacao HOM05D007521 ORTHO05D009387 7.6e-17 91.7 203 32.0
Ciclev10033598m.g Citrus clementina HOM05D007521 ORTHO05D009387 1.0e-16 91.3 180 35.0
FAN06G0083 Fragaria x ananassa HOM05D007521 ORTHO05D009387 1.0e-16 91.3 201 33.8
Gohir.D05G278400 Gossypium hirsutum HOM05D007521 ORTHO05D009387 1.7e-16 90.5 226 32.3
Cpa.g.sc65.80 Carica papaya HOM05D007521 ORTHO05D009387 2.9e-16 89.7 206 32.5
Duzib114G0131 Durio zibethinus HOM05D007521 ORTHO05D009387 2.9e-16 89.7 189 32.3
Carub.0007s2116 Capsella rubella HOM05D007521 ORTHO05D009387 4.9e-16 89.0 159 35.2
Eucgr.G03172 Eucalyptus grandis HOM05D007521 ORTHO05D009387 4.9e-16 89.0 192 33.3
Potri.019G065400 Populus trichocarpa HOM05D007521 ORTHO05D009387 4.9e-16 89.0 192 32.8
AL7G33920 Arabidopsis lyrata HOM05D007521 ORTHO05D009387 8.4e-16 88.2 158 35.4
Lalb_Chr11g0067611 Lupinus albus HOM05D007521 ORTHO05D009387 8.4e-16 88.2 193 35.8
Ca_16847_v3 Cicer arietinum L. HOM05D006307 ORTHO05D008123 1.1e-15 87.8 172 33.1
QL08p065346 Quercus lobata HOM05D007521 ORTHO05D009387 1.1e-15 87.8 201 31.8
BraA01t01121Z Brassica rapa HOM05D007521 ORTHO05D009387 1.4e-15 87.4 151 37.1
Zm00001eb284340 Zea mays HOM05D007521 ORTHO05D009387 1.4e-15 87.4 147 36.7
A01p11790 Brassica napus HOM05D007521 ORTHO05D009387 2.5e-15 86.7 148 37.2
BcaC09g51354 Brassica carinata HOM05D007521 ORTHO05D009387 4.2e-15 85.9 151 37.1
VMungo1309G1947 Vigna mungo HOM05D006307 ORTHO05D008123 4.2e-15 85.9 143 37.8
C01p13990 Brassica napus HOM05D007521 ORTHO05D009387 5.5e-15 85.5 175 34.9
BolC1t01366H Brassica oleracea HOM05D007521 ORTHO05D009387 5.5e-15 85.5 175 34.9
Glyma.04G224700 Glycine max HOM05D007521 ORTHO05D009387 7.1e-15 85.1 170 32.9
arahy.Tifrunner.gnm1.ann1.RI9J7M Arachis hypogaea HOM05D006307 ORTHO05D008123 2.7e-14 83.2 203 31.5
Sabra19G0079100 Salix brachista HOM05D007521 ORTHO05D009387 6.0e-14 82.0 195 30.8
SEGI_30344 Sequoiadendron giganteum HOM05D007521 ORTHO05D009387 6.0e-14 82.0 117 40.2
HPP92_019762 Vanilla planifolia HOM05D007521 ORTHO05D009387 6.0e-14 82.0 136 36.8
CiPaw.08G155800 Carya illinoinensis HOM05D007521 ORTHO05D009387 7.9e-14 81.6 201 30.3
Sp7g18440 Schrenkiella parvula HOM05D007521 ORTHO05D009387 1.3e-13 80.9 84 48.8
SGA_v2.0_scaffold60G20871 Striga asiatica HOM05D006307 ORTHO05D008123 1.3e-13 80.9 194 31.4
CARHR226760 Cardamine hirsuta HOM05D007521 ORTHO05D009387 1.8e-13 80.5 84 46.4
Phvul.009G041300 Phaseolus vulgaris HOM05D007521 ORTHO05D009387 1.8e-13 80.5 169 33.1
BcaNung01738 Brassica carinata HOM05D007521 ORTHO05D009387 2.3e-13 80.1 84 47.6
Atru.BG.268.p Acer truncatum HOM05D007521 ORTHO05D009387 6.7e-13 78.6 84 48.8
CBR_g4502 Chara braunii HOM05D007521 ORTHO05D009387 8.7e-13 78.2 92 44.6
THA.LOC104811673 Tarenaya hassleriana HOM05D007521 ORTHO05D009387 1.5e-12 77.4 166 33.1
Aa31LG6G2400 Aethionema arabicum HOM05D007521 ORTHO05D009387 1.9e-12 77.0 83 47.0
Peaxi162Scf00167g01120 Petunia axillaris HOM05D007521 ORTHO05D009387 1.3e-11 74.3 126 34.9
Ah.12g064700 Amaranthus hybridus HOM05D007521 ORTHO05D009387 5.3e-10 68.9 85 44.7
DCAR_018052 Daucus carota HOM05D006307 ORTHO05D009387 1.3e-08 64.3 137 34.3
Actinidia07775 Actinidia chinensis HOM05D007521 ORTHO05D009387 4.2e-07 59.3 158 32.3
CSS0047724 Camellia sinensis var. sinensis HOM05D007521 ORTHO05D009387 4.6e-06 55.8 119 31.9
Rhsim05G0233000 Rhododendron simsii HOM05D003003 ORTHO05D008343 7.9e-06 55.1 124 29.0
Sed0024487 Sechium edule HOM05D003003 ORTHO05D008343 7.9e-06 55.1 80 36.2


User provided reference genes

Program Settings