Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 6.6e-102 374.0 185 100.0
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 2.9e-41 172.6 175 51.4
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 2.6e-34 149.4 152 50.7
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.7e-33 146.7 163 49.1
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 1.7e-33 146.7 152 48.7
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 2.2e-33 146.4 155 49.0
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.2e-33 146.4 155 49.0
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.2e-33 146.4 155 49.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.2e-33 146.4 155 49.0
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 3.8e-33 145.6 152 48.0
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 5.0e-33 145.2 152 48.7
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 5.0e-33 145.2 173 46.2
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 8.5e-33 144.4 152 46.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 8.5e-33 144.4 153 48.4
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 1.1e-32 144.1 153 47.7
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 1.4e-32 143.7 172 45.9
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.9e-32 143.3 153 48.4
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.9e-32 143.3 153 47.7
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 2.5e-32 142.9 153 49.0
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 4.2e-32 142.1 157 49.7
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.5e-32 141.7 155 49.0
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 7.2e-32 141.4 152 46.7
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 7.2e-32 141.4 163 46.0
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.6e-31 140.2 152 48.0
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.6e-31 140.2 151 47.0
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 2.1e-31 139.8 151 47.0
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 2.7e-31 139.4 177 45.2
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 2.7e-31 139.4 153 48.4
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 2.7e-31 139.4 151 47.0
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 2.7e-31 139.4 150 46.7
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 3.6e-31 139.0 150 48.7
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 3.6e-31 139.0 152 46.1
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 4.7e-31 138.7 150 48.0
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 6.1e-31 138.3 152 45.4
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 6.1e-31 138.3 151 46.4
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 7.9e-31 137.9 175 43.4
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 7.9e-31 137.9 153 47.1
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.4e-30 137.1 151 45.7
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 1.4e-30 137.1 152 46.1
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 1.8e-30 136.7 152 46.1
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 2.3e-30 136.3 153 46.4
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 3.9e-30 135.6 151 45.7
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 5.2e-30 135.2 152 44.7
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 5.2e-30 135.2 177 44.6
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 8.8e-30 134.4 152 48.7
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 1.1e-29 134.0 164 45.1
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.1e-29 134.0 179 43.0
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.1e-29 134.0 174 43.7
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 1.5e-29 133.7 153 47.1
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 2.0e-29 133.3 158 44.3
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 2.6e-29 132.9 150 46.0
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 3.3e-29 132.5 150 44.0
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 4.4e-29 132.1 180 43.3
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 5.7e-29 131.7 151 45.0
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 7.4e-29 131.3 154 46.1
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 7.4e-29 131.3 151 45.0
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 7.4e-29 131.3 151 45.0
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 9.7e-29 131.0 157 44.6
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 1.3e-28 130.6 151 45.7
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.7e-28 130.2 148 47.3
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 2.2e-28 129.8 157 43.9
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 4.8e-28 128.6 172 40.7
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 6.3e-28 128.3 150 43.3
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 8.2e-28 127.9 160 41.9
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.4e-27 127.1 151 44.4
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 1.4e-27 127.1 184 39.7
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 1.8e-27 126.7 177 43.5
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 1.8e-27 126.7 154 41.6
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 1.8e-27 126.7 169 43.2
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.4e-27 126.3 144 44.4
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 4.1e-27 125.6 173 40.5
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 5.3e-27 125.2 135 48.1
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 7.0e-27 124.8 144 43.8
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 9.1e-27 124.4 144 43.8
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.2e-26 124.0 175 39.4
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 2.0e-26 123.2 163 40.5
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 2.0e-26 123.2 175 40.6
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.0e-26 123.2 165 41.8
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 1.0e-25 120.9 164 41.5
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 1.0e-25 120.9 154 44.8
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 1.3e-25 120.6 164 41.5
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.3e-25 120.6 163 41.7
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 1.7e-25 120.2 173 39.3
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 2.2e-25 119.8 176 40.3
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 3.8e-25 119.0 181 39.8
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 5.0e-25 118.6 204 37.3
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 6.5e-25 118.2 186 38.7
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 8.5e-25 117.9 170 39.4
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 1.9e-24 116.7 176 39.2
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 1.9e-24 116.7 176 39.2
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 2.7e-23 112.8 152 40.1
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 3.0e-22 109.4 134 43.3
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 2.6e-21 106.3 161 37.3
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 2.4e-19 99.8 152 37.5
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 5.3e-19 98.6 153 41.2
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 4.5e-18 95.5 96 49.0
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 7.2e-16 88.2 94 46.8
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 1.5e-13 80.5 159 33.3
Cre17.g714900 Chlamydomonas reinhardtii HOM05D007115 ORTHO05D008923 2.0e-13 80.1 179 29.6
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.7e-12 77.0 86 43.0
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 3.7e-12 75.9 90 50.0
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 1.4e-11 73.9 83 45.8
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 7.7e-10 68.2 62 48.4
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.9e-09 66.2 55 56.4
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 2.9e-09 66.2 80 40.0


User provided reference genes

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