Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 2.1e-129 465.7 233 100.0
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 1.7e-25 120.6 242 32.6
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 2.6e-23 113.2 236 33.5
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 1.7e-22 110.5 253 32.0
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 2.1e-20 103.6 240 31.2
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 3.6e-20 102.8 166 38.6
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 4.7e-20 102.4 250 31.6
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 4.7e-20 102.4 206 31.6
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 6.1e-20 102.1 239 31.4
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 1.4e-19 100.9 248 31.0
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.4e-19 100.9 250 31.2
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.4e-19 100.9 244 30.7
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.8e-19 100.5 235 30.6
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 3.0e-19 99.8 236 31.8
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 3.9e-19 99.4 244 32.4
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 5.2e-19 99.0 241 31.5
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 5.2e-19 99.0 227 29.5
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 5.2e-19 99.0 244 32.4
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 6.7e-19 98.6 252 29.4
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 8.8e-19 98.2 237 32.1
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.1e-18 97.8 241 29.9
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 2.0e-18 97.1 228 30.3
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 3.3e-18 96.3 245 30.2
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 4.4e-18 95.9 228 28.9
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 4.4e-18 95.9 228 28.9
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 4.4e-18 95.9 228 28.9
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 5.7e-18 95.5 257 28.0
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 7.4e-18 95.1 246 30.5
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 7.4e-18 95.1 257 29.6
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 9.7e-18 94.7 252 31.0
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.7e-17 94.0 243 31.7
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 2.2e-17 93.6 239 31.8
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 3.7e-17 92.8 246 30.5
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 3.7e-17 92.8 246 30.5
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 3.7e-17 92.8 250 30.4
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 6.3e-17 92.0 249 28.5
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 8.2e-17 91.7 253 30.4
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 8.2e-17 91.7 252 28.2
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 8.2e-17 91.7 244 29.1
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.1e-16 91.3 251 30.3
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 1.1e-16 91.3 250 28.0
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.4e-16 90.9 234 33.3
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.4e-16 90.9 244 29.5
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 1.4e-16 90.9 244 29.5
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 1.4e-16 90.9 240 29.6
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.4e-16 90.9 246 27.6
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.8e-16 90.5 257 30.0
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.8e-16 90.5 245 31.0
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 1.8e-16 90.5 252 28.6
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 1.8e-16 90.5 240 27.5
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 3.1e-16 89.7 242 30.2
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 4.1e-16 89.4 249 28.1
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 5.3e-16 89.0 246 28.5
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 5.3e-16 89.0 245 29.8
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 7.0e-16 88.6 245 28.2
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 7.0e-16 88.6 245 29.4
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 9.1e-16 88.2 240 30.0
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 1.2e-15 87.8 240 30.0
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 2.0e-15 87.0 245 29.0
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 3.5e-15 86.3 239 29.7
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 3.5e-15 86.3 262 26.7
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 4.5e-15 85.9 250 27.2
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 4.5e-15 85.9 253 27.7
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 7.7e-15 85.1 233 28.3
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 1.0e-14 84.7 266 28.6
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 1.0e-14 84.7 260 28.8
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 1.3e-14 84.3 251 28.3
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.3e-14 84.3 240 28.8
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 1.7e-14 84.0 246 29.3
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 2.9e-14 83.2 243 25.5
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 5.0e-14 82.4 240 28.8
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 5.0e-14 82.4 251 27.5
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 8.5e-14 81.6 240 29.2
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.5e-13 80.9 173 32.4
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 2.5e-13 80.1 235 28.5
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 4.2e-13 79.3 240 29.6
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 2.1e-12 77.0 250 26.8
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 2.7e-12 76.6 234 29.1
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 2.7e-12 76.6 246 26.0
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.4e-11 74.3 240 27.1
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.8e-11 73.9 299 24.4
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 6.7e-11 72.0 208 29.3
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 1.5e-10 70.9 169 29.6
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.3e-09 67.8 170 31.8
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.3e-09 67.8 211 29.9
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 3.7e-09 66.2 227 26.4
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.4e-08 64.3 154 30.5
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 2.4e-08 63.5 203 28.6
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 3.1e-08 63.2 172 29.1
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 4.5e-07 59.3 219 27.9
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 1.7e-06 57.4 309 22.7
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 6.5e-06 55.5 146 30.1


User provided reference genes

Program Settings