Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0461 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 4.5e-141 504.6 257 100.0
SMO002G0002 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.1e-128 463.4 237 98.7
MBI18_g04687_MAGBIO Magnolia biondii HOM05D007625 ORTHO05D009738 4.4e-72 275.4 252 53.2
Os01g0120400 Oryza sativa ssp. japonica HOM05D007625 ORTHO05D009738 7.6e-72 274.6 258 54.7
Pp3c1_7890 Physcomitrium patens HOM05D007625 ORTHO05D009738 9.9e-72 274.2 252 54.4
ATR0796G164 Amborella trichopoda HOM05D007625 ORTHO05D009738 1.3e-71 273.9 248 52.8
Thecc.04G284200 Theobroma cacao HOM05D007625 ORTHO05D009738 1.7e-71 273.5 250 55.2
Rhsim02G0009500 Rhododendron simsii HOM05D007625 ORTHO05D009738 1.9e-70 270.0 260 50.8
CANSAT78G1499 Cannabis sativa HOM05D007625 ORTHO05D009738 4.1e-70 268.9 252 53.6
MD13G1169000 Malus domestica HOM05D007625 ORTHO05D009738 1.6e-69 266.9 255 51.8
SGA_v2.0_scaffold428G51521 Striga asiatica HOM05D007625 ORTHO05D009738 2.7e-69 266.2 249 53.8
PGR031G0588 Punica granatum HOM05D007625 ORTHO05D009738 3.5e-69 265.8 252 51.6
Atru.chr4.2832 Acer truncatum HOM05D007625 ORTHO05D009738 4.6e-69 265.4 249 52.6
Migut.N00092 Erythranthe guttata HOM05D007625 ORTHO05D009738 7.8e-69 264.6 250 52.8
TAR633G2367 Trochodendron aralioides HOM05D007625 ORTHO05D009738 7.8e-69 264.6 249 53.8
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 1.0e-68 264.2 255 53.3
BcaB06g25757 Brassica carinata HOM05D007625 ORTHO05D009738 1.7e-68 263.5 247 51.8
Ciclev10005679m.g Citrus clementina HOM05D007625 ORTHO05D009738 1.7e-68 263.5 250 52.4
Prupe.1G137400 Prunus persica HOM05D007625 ORTHO05D009738 3.9e-68 262.3 257 51.8
TWI09G0101 Tripterygium wilfordii HOM05D007625 ORTHO05D009738 3.9e-68 262.3 248 53.2
Lsat_1_v5_gn_5_53001 Lactuca sativa HOM05D007625 ORTHO05D009738 6.6e-68 261.5 246 53.3
AL3G29430 Arabidopsis lyrata HOM05D007625 ORTHO05D009738 1.1e-67 260.8 250 51.2
Duzib212G0442 Durio zibethinus HOM05D007625 ORTHO05D009738 1.1e-67 260.8 250 52.4
Thhalv10021369m.g Eutrema salsugineum HOM05D007625 ORTHO05D009738 1.5e-67 260.4 250 52.0
FAN07G2640 Fragaria x ananassa HOM05D007625 ORTHO05D009738 3.3e-67 259.2 257 49.4
Psat4g025880 Pisum sativum HOM05D007625 ORTHO05D009738 4.3e-67 258.8 251 52.6
Gohir.D09G240200 Gossypium hirsutum HOM05D007625 ORTHO05D009738 5.6e-67 258.5 252 52.8
Medtr4g119840 Medicago truncatula HOM05D007625 ORTHO05D009738 5.6e-67 258.5 251 51.8
arahy.Tifrunner.gnm1.ann1.96EVWK Arachis hypogaea HOM05D007625 ORTHO05D009738 7.3e-67 258.1 258 51.9
arahy.Tifrunner.gnm1.ann1.QKB3E6 Arachis hypogaea HOM05D007625 ORTHO05D009738 7.3e-67 258.1 258 51.9
Gohir.A09G239300 Gossypium hirsutum HOM05D007625 ORTHO05D009738 7.3e-67 258.1 251 51.4
Lj4g0027770 Lotus japonicus HOM05D007625 ORTHO05D009738 7.3e-67 258.1 251 53.0
Lalb_Chr13g0303611 Lupinus albus HOM05D007625 ORTHO05D009738 1.6e-66 256.9 250 51.6
VMungo1215G1867 Vigna mungo HOM05D007625 ORTHO05D009738 1.6e-66 256.9 251 51.8
ECA240G3588 Erigeron canadensis HOM05D007625 ORTHO05D009738 3.6e-66 255.8 258 50.8
Sp3g14890 Schrenkiella parvula HOM05D007625 ORTHO05D009738 3.6e-66 255.8 250 51.6
Ca_21505_v3 Cicer arietinum L. HOM05D007625 ORTHO05D009738 4.7e-66 255.4 251 51.4
FvH4_4g17960 Fragaria vesca HOM05D007625 ORTHO05D009738 4.7e-66 255.4 249 49.4
TPR.G3171 Trifolium pratense HOM05D007625 ORTHO05D009738 4.7e-66 255.4 254 52.0
GSVIVG01017755001 Vitis vinifera HOM05D007625 ORTHO05D009738 4.7e-66 255.4 238 53.8
Phvul.003G105100 Phaseolus vulgaris HOM05D007625 ORTHO05D009738 1.1e-65 254.2 252 51.2
RcHm_v2.0_Chr4g0422131 Rosa chinensis HOM05D007625 ORTHO05D009738 1.1e-65 254.2 250 49.2
Glyma.07G247900 Glycine max HOM05D007625 ORTHO05D009738 4.0e-65 252.3 249 52.2
Hund20557 Selenicereus undatus HOM05D007625 ORTHO05D009738 4.0e-65 252.3 250 50.4
Actinidia00027 Actinidia chinensis HOM05D007625 ORTHO05D009738 6.9e-65 251.5 250 51.6
CARHR091770 Cardamine hirsuta HOM05D007625 ORTHO05D009738 8.9e-65 251.1 250 49.2
Sabra10G0014200 Salix brachista HOM05D007625 ORTHO05D009738 1.2e-64 250.8 253 54.2
BraA05t22123Z Brassica rapa HOM05D007625 ORTHO05D009738 2.0e-64 250.0 267 47.6
PSO017G7039 Papaver somniferum HOM05D007625 ORTHO05D009738 2.0e-64 250.0 249 52.2
HanXRQChr03g0080751 Helianthus annuus HOM05D007625 ORTHO05D009738 3.4e-64 249.2 247 50.2
BcaNung06438 Brassica carinata HOM05D007625 ORTHO05D009738 5.8e-64 248.4 228 50.4
Manes.03G194700 Manihot esculenta HOM05D007625 ORTHO05D009738 7.6e-64 248.1 249 50.2
QL06p008815 Quercus lobata HOM05D007625 ORTHO05D009738 7.6e-64 248.1 250 50.4
BolC5t33727H Brassica oleracea HOM05D007625 ORTHO05D009738 9.9e-64 247.7 267 47.2
Aqoxy2G02997 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 2.2e-63 246.5 247 50.2
Rhsim02G0010500 Rhododendron simsii HOM05D007625 ORTHO05D009738 2.2e-63 246.5 242 50.0
CSS0007271 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 1.1e-62 244.2 262 47.7
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 3.2e-62 242.7 216 55.1
FAN12G1696 Fragaria x ananassa HOM05D007625 ORTHO05D009738 5.4e-62 241.9 245 47.8
C05p49750 Brassica napus HOM05D007625 ORTHO05D009738 9.3e-62 241.1 258 48.1
Gorai.006G263200 Gossypium raimondii HOM05D007625 ORTHO05D009738 9.3e-62 241.1 234 52.1
Cc03_g01990 Coffea canephora HOM05D007625 ORTHO05D009738 2.1e-61 240.0 243 50.6
AT3G16565 Arabidopsis thaliana HOM05D007625 ORTHO05D009738 2.7e-61 239.6 283 44.9
FAN12G4294 Fragaria x ananassa HOM05D007625 ORTHO05D009738 3.5e-61 239.2 241 48.5
Eucgr.B01310 Eucalyptus grandis HOM05D007625 ORTHO05D009738 5.1e-60 235.3 237 49.4
FAN17G2144 Fragaria x ananassa HOM05D007625 ORTHO05D009738 2.5e-59 233.0 275 45.1
AagrBONN_evm.TU.Sc2ySwM_228.2358 Anthoceros agrestis HOM05D007625 ORTHO05D009738 9.0e-57 224.6 183 57.4
Potri.010G024900 Populus trichocarpa HOM05D007625 ORTHO05D009738 1.2e-56 224.2 243 51.4
vmacro15237 Vaccinium macrocarpon HOM05D007625 ORTHO05D009738 1.5e-56 223.8 246 48.0
Dinv44384 Davidia involucrata HOM05D007625 ORTHO05D005073 9.9e-56 221.1 247 47.4
CSS0032939 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 6.4e-55 218.4 281 42.7
Hma1.2p1_1567F.1_g291060 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 5.4e-54 215.3 208 51.0
Nn3g21433 Nelumbo nucifera HOM05D007625 ORTHO05D009738 6.0e-53 211.8 248 46.8
CDE12G0709 Ceratophyllum demersum HOM05D007625 ORTHO05D009738 1.0e-52 211.1 245 47.3
Hma1.2p1_0078F.1_g040640 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 1.3e-52 210.7 203 50.7
MCO16G322 Micromonas commoda HOM05D007625 ORTHO05D009738 1.8e-49 200.3 268 41.4
Aa31LG8G3700 Aethionema arabicum HOM05D007625 ORTHO05D009738 7.4e-43 178.3 264 39.0
Carub.0003s1629 Capsella rubella HOM05D007625 ORTHO05D009738 9.6e-43 177.9 150 54.0
Lj3A819G38 Lonicera japonica HOM05D007625 ORTHO05D009738 8.2e-42 174.9 269 41.6
Cpa.g.sc16.167 Carica papaya HOM05D007625 ORTHO05D009738 2.2e-39 166.8 201 45.8
Lj3A816T27 Lonicera japonica HOM05D007625 ORTHO05D009738 2.9e-39 166.4 213 45.5
AUR62035873 Chenopodium quinoa HOM05D007625 ORTHO05D009738 2.1e-37 160.2 194 45.4
Zm00001eb334800 Zea mays HOM05D007625 ORTHO05D009738 6.0e-37 158.7 187 47.6
Glyma.17G026200 Glycine max HOM05D007625 ORTHO05D009738 4.8e-34 149.1 215 41.9
Sc19g0005180 Simmondsia chinensis HOM05D007625 ORTHO05D009738 8.5e-31 138.3 250 34.8
EL10Ac3g06592 Beta vulgaris HOM05D007625 ORTHO05D009738 9.1e-25 118.2 250 31.2
BcaB03g15776 Brassica carinata HOM05D007625 ORTHO05D009738 9.7e-19 98.2 108 48.1
unitig_0.g621 Utricularia gibba HOM05D007625 ORTHO05D009738 5.9e-16 89.0 144 36.1
Medtr4g123440 Medicago truncatula HOM05D007625 ORTHO05D009738 1.8e-12 77.4 128 41.4
Cpa.g.c47082 Carica papaya HOM05D007625 ORTHO05D009738 1.7e-10 70.9 81 48.1
Hma1.2p1_0785F.1_g217410 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 3.7e-10 69.7 115 33.0
EL10Ac7g16954 Beta vulgaris HOM05D001816 ORTHO05D002001 1.8e-09 67.4 256 23.4
SMO234G0071 Selaginella moellendorffii HOM05D001816 ORTHO05D002001 7.0e-09 65.5 244 24.2
Aqoxy2G02999 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 1.6e-08 64.3 67 44.8
PSO170G2372 Papaver somniferum HOM05D001816 ORTHO05D002001 1.6e-08 64.3 220 24.5
Ah.08g210750 Amaranthus hybridus HOM05D001816 ORTHO05D002001 1.0e-07 61.6 256 24.2
Peaxi162Scf00133g00523 Petunia axillaris HOM05D001816 ORTHO05D002001 2.9e-07 60.1 253 23.7
Nitab4.5_0009278g0020 Nicotiana tabacum HOM05D001816 ORTHO05D002001 3.8e-07 59.7 131 29.8
Ah.15g091020 Amaranthus hybridus HOM05D001816 ORTHO05D002001 8.5e-07 58.5 122 27.0
BraA05t20939Z Brassica rapa HOM05D001816 ORTHO05D002001 1.9e-06 57.4 102 32.4
A05p20290 Brassica napus HOM05D001816 ORTHO05D002001 2.5e-06 57.0 102 32.4
Glyma.19G060100 Glycine max HOM05D007625 ORTHO05D009738 3.2e-06 56.6 100 37.0
Sabra05G0078100 Salix brachista HOM05D001816 ORTHO05D002001 4.2e-06 56.2 266 21.4
Eucgr.J00856 Eucalyptus grandis HOM05D001816 ORTHO05D002001 5.5e-06 55.8 105 32.4


User provided reference genes

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