Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0422 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 1.6e-188 662.5 322 100.0
SMO347G0290 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 3.5e-74 282.7 309 50.5
Hund21620 Selenicereus undatus HOM05D006152 ORTHO05D008137 7.3e-72 275.0 305 50.2
SMO169G0164 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 3.0e-70 269.6 301 50.8
Manes.06G038100 Manihot esculenta HOM05D006152 ORTHO05D008137 3.4e-69 266.2 327 45.3
Aqoxy1G03917 Aquilegia oxysepala HOM05D006152 ORTHO05D008137 1.7e-68 263.8 323 45.2
Lsat_1_v5_gn_5_90820 Lactuca sativa HOM05D006152 ORTHO05D008137 1.7e-68 263.8 309 44.7
Glyma.13G155700 Glycine max HOM05D006152 ORTHO05D008137 2.2e-68 263.5 322 43.5
Ciclev10008799m.g Citrus clementina HOM05D006152 ORTHO05D008137 2.9e-68 263.1 326 45.1
HanXRQChr10g0314551 Helianthus annuus HOM05D006152 ORTHO05D008137 3.7e-68 262.7 312 44.6
Phvul.003G158400 Phaseolus vulgaris HOM05D006152 ORTHO05D008137 3.7e-68 262.7 321 44.2
Actinidia38346 Actinidia chinensis HOM05D006152 ORTHO05D008137 6.4e-68 261.9 329 43.5
Os06g0182400 Oryza sativa ssp. japonica HOM05D006152 ORTHO05D008137 6.4e-68 261.9 328 44.2
Lalb_Chr12g0198561 Lupinus albus HOM05D006152 ORTHO05D008137 1.1e-67 261.2 329 42.6
Prupe.7G259100 Prunus persica HOM05D006152 ORTHO05D008137 1.1e-67 261.2 307 47.2
MSTRG.26302 Avicennia marina HOM05D006152 ORTHO05D008137 1.8e-67 260.4 325 44.6
Migut.K00351 Erythranthe guttata HOM05D006152 ORTHO05D008137 1.8e-67 260.4 309 46.0
Solyc07g005120.3 Solanum lycopersicum HOM05D006152 ORTHO05D008137 1.8e-67 260.4 309 45.6
Sopen07g001260 Solanum pennellii HOM05D006152 ORTHO05D008137 2.4e-67 260.0 309 46.0
THA.LOC104811841 Tarenaya hassleriana HOM05D006152 ORTHO05D008137 1.2e-66 257.7 335 44.2
DCAR_019366 Daucus carota HOM05D006152 ORTHO05D008137 1.6e-66 257.3 323 45.5
Lj4g0021784 Lotus japonicus HOM05D006152 ORTHO05D008137 1.6e-66 257.3 313 43.5
SEGI_04227 Sequoiadendron giganteum HOM05D006152 ORTHO05D008137 2.0e-66 256.9 312 42.6
A02p07870 Brassica napus HOM05D006152 ORTHO05D008137 4.6e-66 255.8 312 47.4
FvH4_1g01320 Fragaria vesca HOM05D006152 ORTHO05D008137 5.9e-66 255.4 326 44.5
Nn2g12295 Nelumbo nucifera HOM05D006152 ORTHO05D008137 7.8e-66 255.0 317 44.8
Sed0008154 Sechium edule HOM05D006152 ORTHO05D008137 7.8e-66 255.0 311 45.0
Gohir.D05G052200 Gossypium hirsutum HOM05D006152 ORTHO05D008137 1.0e-65 254.6 298 45.6
SalBow1G4451 Salvia bowleyana HOM05D001472 ORTHO05D002655 1.3e-65 254.2 306 45.8
TPR.G37046 Trifolium pratense HOM05D006152 ORTHO05D008137 1.3e-65 254.2 321 42.7
TWI32G1323 Tripterygium wilfordii HOM05D006152 ORTHO05D008137 1.3e-65 254.2 325 44.0
AT5G58200 Arabidopsis thaliana HOM05D006152 ORTHO05D008137 2.3e-65 253.4 313 43.8
AL8G34300 Arabidopsis lyrata HOM05D006152 ORTHO05D008137 3.0e-65 253.1 313 44.4
Carub.0008s1874 Capsella rubella HOM05D006152 ORTHO05D008137 3.9e-65 252.7 320 45.0
Pp3c26_6540 Physcomitrium patens HOM05D006152 ORTHO05D008137 3.9e-65 252.7 302 47.4
CsaV3_2G003440 Cucumis sativus L. HOM05D006152 ORTHO05D008137 5.0e-65 252.3 315 44.1
MD02G1011000 Malus domestica HOM05D006152 ORTHO05D008137 5.0e-65 252.3 300 44.7
CiPaw.16G115700 Carya illinoinensis HOM05D006152 ORTHO05D008137 6.6e-65 251.9 325 43.7
Medtr4g131670 Medicago truncatula HOM05D006152 ORTHO05D008137 8.6e-65 251.5 321 41.4
Eucgr.C00382 Eucalyptus grandis HOM05D006152 ORTHO05D008137 1.5e-64 250.8 306 43.1
Thhalv10014084m.g Eutrema salsugineum HOM05D006152 ORTHO05D008137 1.5e-64 250.8 313 43.8
Oeu043492.1 Olea europaea HOM05D006152 ORTHO05D008137 3.3e-64 249.6 326 42.6
BcaB05g22408 Brassica carinata HOM05D006152 ORTHO05D008137 9.5e-64 248.1 315 45.4
C02p13510 Brassica napus HOM05D006152 ORTHO05D008137 9.5e-64 248.1 299 46.2
Gorai.009G054000 Gossypium raimondii HOM05D006152 ORTHO05D008137 9.5e-64 248.1 309 44.0
TPR.G6509 Trifolium pratense HOM05D006152 ORTHO05D008137 1.2e-63 247.7 321 42.4
BraA02t05860Z Brassica rapa HOM05D006152 ORTHO05D008137 1.6e-63 247.3 316 45.6
Sp6g19860 Schrenkiella parvula HOM05D006152 ORTHO05D008137 1.6e-63 247.3 335 42.4
Thecc.09G035000 Theobroma cacao HOM05D006152 ORTHO05D008137 2.8e-63 246.5 310 42.9
PGR142G2956 Punica granatum HOM05D006152 ORTHO05D008137 4.7e-63 245.7 325 42.8
AUR62010759 Chenopodium quinoa HOM05D001472 ORTHO05D002655 1.0e-62 244.6 304 44.4
RcHm_v2.0_Chr2g0086151 Rosa chinensis HOM05D006152 ORTHO05D008137 1.0e-62 244.6 326 42.9
Hma1.2p1_0222F.1_g093200 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 1.2e-61 241.1 259 47.1
BcaC03g14112 Brassica carinata HOM05D006152 ORTHO05D008137 2.0e-61 240.4 303 44.9
ECA234G4022 Erigeron canadensis HOM05D000464 ORTHO05D000408 2.0e-61 240.4 294 43.9
AagrBONN_evm.TU.Sc2ySwM_228.5740 Anthoceros agrestis HOM05D006152 ORTHO05D008137 2.6e-61 240.0 315 43.8
arahy.Tifrunner.gnm1.ann1.QAR9AW Arachis hypogaea HOM05D006152 ORTHO05D008137 2.6e-61 240.0 325 41.5
BolC2t07463H Brassica oleracea HOM05D006152 ORTHO05D008137 7.5e-61 238.4 303 44.6
PSO384G3563 Papaver somniferum HOM05D006152 ORTHO05D008137 1.3e-60 237.7 314 42.4
PSO384G4708 Papaver somniferum HOM05D006152 ORTHO05D008137 1.3e-60 237.7 314 42.4
SalBow5G3728 Salvia bowleyana HOM05D001472 ORTHO05D002655 3.7e-60 236.1 281 45.6
CARHR272000 Cardamine hirsuta HOM05D006152 ORTHO05D008137 1.1e-59 234.6 297 44.4
Rhsim01G0042700 Rhododendron simsii HOM05D006152 ORTHO05D008137 1.6e-58 230.7 363 37.7
SGA_v2.0_scaffold387G50519 Striga asiatica HOM05D006152 ORTHO05D008137 1.6e-58 230.7 362 39.0
AUR62041375 Chenopodium quinoa HOM05D001472 ORTHO05D002655 2.0e-58 230.3 279 44.8
Mapoly0124s0018 Marchantia polymorpha HOM05D006152 ORTHO05D008137 2.7e-58 229.9 319 41.7
CSS0018805 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 3.5e-58 229.6 304 43.1
FAN23G2003 Fragaria x ananassa HOM05D006152 ORTHO05D008137 7.8e-58 228.4 336 41.1
Rhsim01G0046600 Rhododendron simsii HOM05D006152 ORTHO05D008137 3.0e-57 226.5 346 38.4
arahy.Tifrunner.gnm1.ann1.L77CZK Arachis hypogaea HOM05D006152 ORTHO05D008137 5.0e-57 225.7 317 40.4
Cc06_g15390 Coffea canephora HOM05D006152 ORTHO05D008137 5.0e-57 225.7 355 38.6
Nitab4.5_0003856g0050 Nicotiana tabacum HOM05D006152 ORTHO05D008137 2.5e-56 223.4 308 42.5
Sc14g0000030 Simmondsia chinensis HOM05D006152 ORTHO05D008137 3.3e-56 223.0 286 43.4
Peaxi162Scf00347g00517 Petunia axillaris HOM05D006152 ORTHO05D008137 1.6e-55 220.7 373 37.8
QL02p092448 Quercus lobata HOM05D006152 ORTHO05D008137 2.1e-55 220.3 374 35.8
MD15G1156000 Malus domestica HOM05D006152 ORTHO05D008137 3.6e-55 219.5 353 37.7
unitig_899.g15450 Utricularia gibba HOM05D006152 ORTHO05D003911 3.6e-55 219.5 305 43.3
Haze_19246 Corylus avellana HOM05D006152 ORTHO05D008137 4.7e-55 219.2 327 40.1
CSS0025720 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 1.8e-54 217.2 332 39.2
Ah.04g162170 Amaranthus hybridus HOM05D006152 ORTHO05D008137 4.0e-54 216.1 310 42.3
ATR0184G013 Amborella trichopoda HOM05D006152 ORTHO05D008137 4.0e-54 216.1 289 41.9
Lj7A453G70 Lonicera japonica HOM05D006152 ORTHO05D008137 6.8e-54 215.3 318 39.9
Sabra06G0143900 Salix brachista HOM05D006152 ORTHO05D008137 6.8e-54 215.3 374 37.2
Sabra06G0145100 Salix brachista HOM05D006152 ORTHO05D008137 6.8e-54 215.3 374 37.2
CDE05G0292 Ceratophyllum demersum HOM05D006152 ORTHO05D008137 5.8e-53 212.2 326 39.6
Cpa.g.sc46.115 Carica papaya HOM05D006152 ORTHO05D008137 1.3e-52 211.1 327 39.4
Gohir.A05G050600 Gossypium hirsutum HOM05D006152 ORTHO05D008137 2.2e-52 210.3 267 42.3
TAR383G0013 Trochodendron aralioides HOM05D006152 ORTHO05D008137 1.4e-51 207.6 197 53.8
PSO339G6042 Papaver somniferum HOM05D006152 ORTHO05D008137 9.2e-51 204.9 281 41.6
AUR62019760 Chenopodium quinoa HOM05D001472 ORTHO05D002655 1.2e-50 204.5 271 42.8
Cre17.g729650 Chlamydomonas reinhardtii HOM05D006152 ORTHO05D008137 2.7e-50 203.4 285 43.9
EL10Ac8g18846 Beta vulgaris HOM05D006152 ORTHO05D008137 6.0e-50 202.2 292 39.7
Dinv42894 Davidia involucrata HOM05D006152 ORTHO05D008137 3.9e-49 199.5 193 51.3
vmacro13046 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 8.6e-49 198.4 320 36.6
vmacro23231 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 8.6e-49 198.4 320 36.6
AUR62017200 Chenopodium quinoa HOM05D006152 ORTHO05D008137 6.8e-46 188.7 220 45.9
CAN.G520.14 Capsicum annuum HOM05D006152 ORTHO05D008137 3.4e-45 186.4 226 46.0
VMungo1215G1041 Vigna mungo HOM05D006152 ORTHO05D008137 9.9e-45 184.9 226 42.9
Nitab4.5_0001094g0060 Nicotiana tabacum HOM05D006152 ORTHO05D008137 1.3e-44 184.5 313 37.7
Hma1.2p1_0222F.1_g093210 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 3.8e-44 183.0 243 41.2
Duzib168G0440 Durio zibethinus HOM05D006152 ORTHO05D008137 6.4e-44 182.2 309 36.9
MBI15_g30906_MAGBIO Magnolia biondii HOM05D006152 ORTHO05D008137 1.9e-43 180.6 235 43.8
Psat4g007440 Pisum sativum HOM05D006152 ORTHO05D008137 9.2e-43 178.3 220 43.6
MELO3C004453.2 Cucumis melo HOM05D006152 ORTHO05D008137 1.7e-41 174.1 230 41.3
HPP92_017513 Vanilla planifolia HOM05D006152 ORTHO05D008137 2.5e-40 170.2 173 47.4
QL02p092408 Quercus lobata HOM05D006152 ORTHO05D008137 7.3e-40 168.7 236 39.8
COL.COLO4_18762 Corchorus olitorius HOM05D006152 ORTHO05D008137 4.7e-39 166.0 216 39.8
AUR62002687 Chenopodium quinoa HOM05D006152 ORTHO05D008137 1.4e-38 164.5 264 37.9
PGSC0003DMG400003198 Solanum tuberosum HOM05D006152 ORTHO05D008137 4.0e-38 162.9 206 43.2
CARHR032820 Cardamine hirsuta HOM05D006152 ORTHO05D008137 2.4e-35 153.7 294 36.7
MD00G1188400 Malus domestica HOM05D006152 ORTHO05D008137 5.4e-35 152.5 160 48.1
Migut.K01256 Erythranthe guttata HOM05D006152 ORTHO05D008137 3.5e-34 149.8 138 51.4
Zm00001eb374780 Zea mays HOM05D006152 ORTHO05D008137 1.1e-30 138.3 131 51.9
SMO356G0211 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 2.4e-30 137.1 154 53.2
Dinv43207 Davidia involucrata HOM05D006152 ORTHO05D008137 4.5e-29 132.9 132 48.5
Potri.006G188200 Populus trichocarpa HOM05D006152 ORTHO05D008137 7.1e-27 125.6 187 41.7
GSVIVG01001075001 Vitis vinifera HOM05D006152 ORTHO05D008137 2.7e-26 123.6 314 31.8
AUR62038836 Chenopodium quinoa HOM05D001472 ORTHO05D008137 4.8e-23 112.8 161 38.5
ClCG11G003570 Citrullus lanatus HOM05D006152 ORTHO05D008137 6.2e-23 112.5 176 39.2
Ca_21103_v3 Cicer arietinum L. HOM05D006152 ORTHO05D008137 6.4e-20 102.4 214 32.7
FvH4_1g01380 Fragaria vesca HOM05D006152 ORTHO05D008137 1.8e-17 94.4 108 41.7
PGR142G1207 Punica granatum HOM05D006152 ORTHO05D008137 7.4e-16 89.0 61 62.3
FvH4_1g01360 Fragaria vesca HOM05D006152 ORTHO05D045810 2.1e-15 87.4 130 36.9
GSVIVG01003719001 Vitis vinifera HOM05D006152 ORTHO05D008137 1.1e-14 85.1 61 59.0
FAN28G1911 Fragaria x ananassa HOM05D006152 ORTHO05D008137 9.0e-14 82.0 148 39.9
Oeu028814.1 Olea europaea HOM05D006152 ORTHO05D008137 6.5e-12 75.9 154 31.2


User provided reference genes

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