Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 0.0e+00 1387.9 693 100.0
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 9.5e-178 627.9 672 50.4
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 2.8e-177 626.3 700 48.4
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 4.7e-177 625.5 700 48.4
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 6.1e-177 625.2 692 47.7
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 8.0e-177 624.8 668 49.1
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 1.4e-176 624.0 692 48.7
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 1.4e-176 624.0 675 48.3
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 3.1e-176 622.9 689 49.1
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 4.0e-176 622.5 670 47.3
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 4.0e-176 622.5 691 47.2
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 1.2e-175 620.9 677 47.9
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 1.5e-175 620.5 691 47.5
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 1.5e-175 620.5 669 48.3
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 2.6e-175 619.8 669 47.8
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 3.4e-175 619.4 669 48.0
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 4.4e-175 619.0 670 49.1
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 5.8e-175 618.6 696 47.1
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 9.8e-175 617.8 677 49.0
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 1.7e-174 617.1 674 48.7
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 2.2e-174 616.7 649 48.5
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 2.2e-174 616.7 673 48.1
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 2.2e-174 616.7 679 48.2
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 2.2e-174 616.7 680 48.4
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 3.7e-174 615.9 689 48.0
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 1.4e-173 614.0 665 48.4
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 2.4e-173 613.2 678 48.4
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 3.2e-173 612.8 673 46.8
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 4.1e-173 612.5 690 47.8
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 5.4e-173 612.1 675 48.3
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 9.2e-173 611.3 673 48.3
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 9.2e-173 611.3 692 46.8
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 1.2e-172 610.9 689 47.9
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 1.2e-172 610.9 689 47.8
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 1.2e-172 610.9 713 46.8
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 1.2e-172 610.9 658 50.2
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 2.0e-172 610.1 675 48.1
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 2.7e-172 609.8 686 46.2
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 2.7e-172 609.8 680 47.5
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 3.5e-172 609.4 691 47.5
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 4.6e-172 609.0 751 45.0
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 6.0e-172 608.6 679 47.6
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 6.0e-172 608.6 678 47.6
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 6.0e-172 608.6 667 47.4
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 1.0e-171 607.8 670 47.3
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.3e-171 607.4 680 47.9
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 1.7e-171 607.1 681 48.3
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 2.3e-171 606.7 678 46.8
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 2.3e-171 606.7 652 49.5
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 3.0e-171 606.3 685 47.6
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 1.5e-170 604.0 690 47.0
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 1.9e-170 603.6 672 47.8
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.9e-170 603.6 678 48.5
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 1.9e-170 603.6 670 47.0
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 7.3e-170 601.7 673 47.7
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 7.3e-170 601.7 669 48.4
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 7.3e-170 601.7 668 48.4
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 1.2e-169 600.9 675 47.1
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 1.2e-169 600.9 687 46.0
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 1.6e-169 600.5 675 46.7
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 1.6e-169 600.5 683 46.3
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 2.1e-169 600.1 714 45.5
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.8e-169 599.7 688 46.5
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 2.8e-169 599.7 685 46.6
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 3.6e-169 599.4 683 47.1
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 1.8e-168 597.0 714 44.0
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 1.8e-168 597.0 679 47.7
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 2.3e-168 596.7 685 46.1
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 4.0e-168 595.9 686 47.1
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 7.5e-167 591.7 679 46.7
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 6.4e-166 588.6 663 47.4
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 4.1e-165 585.9 676 45.3
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 7.1e-165 585.1 707 45.4
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 1.7e-163 580.5 684 46.8
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 5.1e-163 578.9 687 44.7
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 1.5e-162 577.4 662 48.0
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 4.3e-162 575.9 671 46.2
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 1.6e-161 573.9 716 44.0
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 1.4e-160 570.9 722 43.2
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 1.3e-158 564.3 589 50.9
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 2.2e-158 563.5 682 46.3
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 7.8e-156 555.1 705 44.3
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 3.9e-155 552.7 682 43.7
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 2.1e-153 547.0 621 46.2
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 1.2e-151 541.2 681 45.2
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 9.6e-146 521.5 494 52.8
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 6.9e-144 515.4 670 43.7
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 1.7e-142 510.8 484 53.1
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 2.4e-141 506.9 632 44.5
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 5.1e-139 499.2 620 45.5
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 5.1e-139 499.2 554 48.2
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 1.9e-138 497.3 519 51.8
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 3.1e-136 490.0 968 33.8
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 9.0e-136 488.4 573 46.8
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 9.9e-135 485.0 685 40.6
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 1.7e-134 484.2 523 48.0
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 7.9e-132 475.3 676 42.0
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 1.5e-127 461.1 686 41.0
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 1.6e-124 451.1 409 56.0
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 2.3e-123 447.2 435 51.7
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 6.9e-112 409.1 639 38.7
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 4.5e-111 406.4 440 50.0
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 3.4e-103 380.2 800 35.9
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 6.5e-102 375.9 420 49.0
CiPaw.05G114700 Carya illinoinensis HOM05D005075 ORTHO05D007097 7.4e-90 335.9 340 51.2
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 9.1e-80 302.4 393 43.8
SEGI_28928 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 2.9e-78 297.4 368 46.2
CBR_g21048 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-73 280.8 405 42.2
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 2.8e-73 280.8 293 48.1
HPP92_001244 Vanilla planifolia HOM05D005075 ORTHO05D007097 3.8e-70 270.4 335 44.5
TPR.G492 Trifolium pratense HOM05D005075 ORTHO05D007097 4.2e-69 266.9 329 42.6
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 1.5e-66 258.5 576 33.5
Os01g0901700 Oryza sativa ssp. japonica HOM05D005075 ORTHO05D007097 9.8e-66 255.8 293 47.4
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 1.8e-59 235.0 645 29.0
PGSC0003DMG400021087 Solanum tuberosum HOM05D005075 ORTHO05D007097 6.8e-51 206.5 231 46.3
CiPaw.05G114800 Carya illinoinensis HOM05D005075 ORTHO05D007097 2.2e-49 201.4 278 41.4
Actinidia08085 Actinidia chinensis HOM05D005075 ORTHO05D007097 4.9e-49 200.3 239 43.1
HPP92_001258 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.7e-46 191.8 284 41.5
Haze_02705 Corylus avellana HOM05D005075 ORTHO05D007097 8.9e-43 179.5 233 44.6
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 2.7e-31 141.4 431 27.8
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 8.7e-30 136.3 122 52.5
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 6.2e-28 130.2 106 58.5
AagrBONN_evm.TU.Sc2ySwM_228.4177 Anthoceros agrestis HOM05D005075 ORTHO05D007097 5.8e-26 123.6 102 58.8
Actinidia30671 Actinidia chinensis HOM05D005075 ORTHO05D007097 3.8e-25 120.9 116 52.6
MBI05_g16127_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 4.6e-23 114.0 211 31.3
MBI18_g19470_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 3.0e-22 111.3 219 29.7
MD16G1112300 Malus domestica HOM05D005075 ORTHO05D007097 1.1e-21 109.4 103 51.5
MBI18_g03939_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.8e-20 104.8 212 29.7
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 1.3e-17 95.9 352 26.1
MBI07_g43659_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.8e-14 85.5 111 41.4
Cfa025560 Carpinus fangiana HOM05D005075 ORTHO05D122628 2.3e-14 85.1 381 24.9
Cfa026038 Carpinus fangiana HOM05D005075 ORTHO05D007097 8.7e-14 83.2 136 39.0
COL.COLO4_15613 Corchorus olitorius HOM05D005075 ORTHO05D162910 1.8e-11 75.5 208 29.8
Cfa026189 Carpinus fangiana HOM05D002287 ORTHO05D123242 5.8e-10 70.5 59 52.5
MBI13_g10206_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.3e-09 69.3 47 53.2
MBI16_g25874_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 6.5e-09 67.0 50 48.0
MBI18_g33166_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 4.2e-08 64.3 52 44.2
MBI18_g47010_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 5.5e-08 63.9 45 51.1
MBI18_g06981_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.1e-07 62.0 47 48.9
MBI18_g03943_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.3e-06 59.3 49 44.9


User provided reference genes

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