Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 7.0e-232 807.0 424 100.0
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 5.6e-48 196.1 447 34.5
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 6.2e-47 192.6 443 33.9
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 3.1e-46 190.3 460 33.9
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 2.6e-45 187.2 465 33.5
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 4.5e-45 186.4 466 33.9
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 7.6e-45 185.7 441 34.7
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 1.7e-44 184.5 460 34.1
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 1.7e-44 184.5 450 33.1
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 3.8e-44 183.3 449 34.1
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 4.9e-44 183.0 471 32.5
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 8.4e-44 182.2 457 32.2
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 8.4e-44 182.2 445 32.8
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 1.9e-43 181.0 484 33.9
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 4.2e-43 179.9 457 32.2
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 4.2e-43 179.9 444 34.0
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 4.2e-43 179.9 455 33.2
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 5.5e-43 179.5 483 33.7
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 5.5e-43 179.5 465 33.8
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 9.3e-43 178.7 486 34.8
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 9.3e-43 178.7 475 33.7
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 1.6e-42 177.9 463 32.4
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 2.7e-42 177.2 457 31.7
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 6.0e-42 176.0 445 31.7
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 6.0e-42 176.0 442 33.5
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 6.0e-42 176.0 458 31.9
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 1.0e-41 175.3 448 31.7
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 1.0e-41 175.3 457 33.0
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 1.0e-41 175.3 467 30.2
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 1.0e-41 175.3 466 29.6
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.3e-41 174.9 459 34.2
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 1.3e-41 174.9 458 32.5
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 2.3e-41 174.1 454 31.9
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 3.0e-41 173.7 439 35.3
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 3.0e-41 173.7 460 32.0
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 3.9e-41 173.3 487 32.9
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 5.1e-41 172.9 464 30.0
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 5.1e-41 172.9 438 32.2
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 8.7e-41 172.2 431 36.2
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 8.7e-41 172.2 444 32.9
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 8.7e-41 172.2 444 32.9
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 1.5e-40 171.4 478 31.2
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 2.5e-40 170.6 443 32.7
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 2.5e-40 170.6 479 32.2
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 3.3e-40 170.2 455 32.7
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 3.3e-40 170.2 452 34.5
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 4.3e-40 169.9 441 30.8
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 4.3e-40 169.9 454 31.1
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 4.3e-40 169.9 447 30.0
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 7.4e-40 169.1 424 33.3
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 9.6e-40 168.7 451 32.6
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 9.6e-40 168.7 448 33.5
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 1.3e-39 168.3 439 31.9
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 1.6e-39 167.9 472 33.3
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 1.6e-39 167.9 464 31.0
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 2.8e-39 167.2 442 30.8
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 4.8e-39 166.4 448 32.1
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 8.2e-39 165.6 485 30.3
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 8.2e-39 165.6 447 33.1
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 8.2e-39 165.6 446 32.1
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 1.1e-38 165.2 465 30.5
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 1.4e-38 164.9 440 32.3
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 1.4e-38 164.9 452 33.0
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 1.8e-38 164.5 455 33.4
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.8e-38 164.5 461 31.2
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 3.1e-38 163.7 450 32.7
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 4.0e-38 163.3 451 30.8
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 5.3e-38 162.9 475 31.4
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 5.3e-38 162.9 437 32.5
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 6.9e-38 162.5 439 31.2
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 1.5e-37 161.4 448 30.4
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 1.5e-37 161.4 445 32.4
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 2.6e-37 160.6 484 31.8
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 5.8e-37 159.5 450 32.4
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 5.8e-37 159.5 516 29.5
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 7.6e-37 159.1 474 31.9
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 1.0e-36 158.7 447 31.1
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 1.3e-36 158.3 443 32.3
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 1.3e-36 158.3 414 33.3
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 4.9e-36 156.4 454 33.7
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 1.1e-35 155.2 448 31.0
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 1.1e-35 155.2 475 28.4
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.4e-35 154.8 432 32.6
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 4.2e-35 153.3 452 30.5
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 5.5e-35 152.9 449 31.2
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 5.5e-35 152.9 441 31.5
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 5.5e-35 152.9 449 31.0
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 9.3e-35 152.1 456 31.8
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 9.3e-35 152.1 490 29.6
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 3.5e-34 150.2 456 31.6
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 3.5e-34 150.2 456 31.6
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 6.1e-34 149.4 456 31.6
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 6.1e-34 149.4 438 29.7
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 2.3e-33 147.5 430 31.9
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 2.3e-33 147.5 442 29.9
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 2.3e-33 147.5 482 30.5
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 1.9e-32 144.4 467 28.7
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 2.5e-32 144.1 448 29.0
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 4.3e-32 143.3 441 28.6
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 7.4e-32 142.5 450 29.3
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 7.4e-32 142.5 448 31.2
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 6.3e-31 139.4 437 30.4
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 1.8e-30 137.9 438 29.5
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 2.4e-30 137.5 436 30.5
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 2.4e-30 137.5 445 29.9
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 4.1e-30 136.7 440 30.5
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 2.6e-29 134.0 465 27.5
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.3e-28 131.7 435 30.6
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 5.0e-28 129.8 500 28.6
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 5.0e-28 129.8 384 28.1
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 1.9e-27 127.9 426 31.7
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 4.6e-26 123.2 506 27.1
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 2.3e-25 120.9 308 33.8
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 4.3e-24 116.7 102 62.7
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 7.4e-24 115.9 270 35.6
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.2e-23 114.4 480 27.7
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 5.9e-21 106.3 341 28.2
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 5.0e-20 103.2 117 55.6
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 1.0e-17 95.5 486 25.5
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 1.2e-13 82.0 282 31.6
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 1.5e-11 75.1 158 35.4
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 6.1e-10 69.7 244 29.5
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 2.3e-09 67.8 126 34.1
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 5.7e-08 63.2 195 34.9
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 2.2e-07 61.2 196 29.6


User provided reference genes

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