Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 1.4e-148 529.6 279 100.0
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 7.0e-140 500.7 281 94.7
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.5e-139 498.4 281 94.0
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 6.6e-138 494.2 281 94.3
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 7.2e-76 288.1 257 58.4
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 5.7e-73 278.5 273 52.4
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 1.1e-71 274.2 275 54.5
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 9.1e-71 271.2 275 54.9
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 1.5e-70 270.4 275 53.8
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 2.0e-70 270.0 275 53.8
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 2.0e-70 270.0 275 54.5
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 5.9e-70 268.5 266 54.1
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.0e-69 267.7 275 52.7
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 2.2e-69 266.5 255 54.1
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.2e-69 266.5 270 54.1
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 2.9e-69 266.2 252 55.6
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 3.8e-69 265.8 275 52.4
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 3.8e-69 265.8 275 52.0
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 5.0e-69 265.4 275 52.4
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 6.5e-69 265.0 271 53.1
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 6.5e-69 265.0 276 52.2
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 1.4e-68 263.8 277 53.1
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 1.4e-68 263.8 270 53.7
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 1.4e-68 263.8 281 52.3
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 2.5e-68 263.1 275 51.3
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 2.5e-68 263.1 270 52.6
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 2.5e-68 263.1 285 53.0
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 2.5e-68 263.1 272 52.6
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 3.2e-68 262.7 275 51.6
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 3.2e-68 262.7 270 52.2
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 3.2e-68 262.7 252 53.2
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 3.2e-68 262.7 275 50.9
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 3.2e-68 262.7 276 52.2
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 4.2e-68 262.3 275 52.7
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 5.5e-68 261.9 270 53.0
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 9.4e-68 261.2 270 52.6
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 9.4e-68 261.2 273 53.1
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 1.2e-67 260.8 268 52.2
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 1.2e-67 260.8 272 53.3
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 1.2e-67 260.8 270 51.5
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 2.1e-67 260.0 270 52.2
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 2.7e-67 259.6 287 51.9
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 2.7e-67 259.6 254 53.5
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 3.6e-67 259.2 275 52.4
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 3.6e-67 259.2 245 56.3
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 3.6e-67 259.2 270 50.4
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 3.6e-67 259.2 266 53.0
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 4.7e-67 258.8 268 53.4
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 6.1e-67 258.5 245 55.9
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 7.9e-67 258.1 282 50.4
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 7.9e-67 258.1 269 51.7
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 7.9e-67 258.1 275 50.5
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 1.0e-66 257.7 283 50.2
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 1.0e-66 257.7 270 52.2
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 1.4e-66 257.3 257 54.1
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 2.3e-66 256.5 269 52.4
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 5.2e-66 255.4 270 51.9
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 5.2e-66 255.4 254 52.8
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 8.8e-66 254.6 270 51.9
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 8.8e-66 254.6 274 50.4
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 1.5e-65 253.8 252 52.8
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 1.5e-65 253.8 294 47.6
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 1.5e-65 253.8 241 54.8
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 2.0e-65 253.4 272 51.8
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 5.7e-65 251.9 270 50.7
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 7.4e-65 251.5 269 51.7
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 9.7e-65 251.1 270 51.9
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 2.8e-64 249.6 307 47.2
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 4.8e-64 248.8 270 51.1
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 1.1e-63 247.7 269 51.3
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 1.4e-63 247.3 275 50.2
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 1.6e-62 243.8 309 44.3
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 2.0e-62 243.4 275 50.2
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 5.9e-62 241.9 291 47.4
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 5.9e-62 241.9 323 44.6
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 3.8e-61 239.2 279 49.1
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 1.5e-60 237.3 278 49.3
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 5.7e-57 225.3 245 50.6
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 7.0e-55 218.4 271 48.7
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 1.7e-53 213.8 247 49.8
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 2.5e-52 209.9 273 46.5
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 1.2e-51 207.6 272 45.2
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 3.6e-51 206.1 187 58.8
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 4.0e-50 202.6 270 45.6
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 1.5e-49 200.7 245 48.2
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 3.4e-49 199.5 202 53.0
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 3.7e-48 196.1 275 44.4
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 1.1e-47 194.5 270 43.7
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 1.1e-47 194.5 197 54.3
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 1.8e-47 193.7 168 60.1
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 1.8e-47 193.7 193 54.9
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 5.4e-47 192.2 294 39.1
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 5.9e-46 188.7 202 52.0
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 1.0e-45 188.0 272 41.5
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 5.0e-45 185.7 193 51.8
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.1e-44 184.5 162 59.3
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.1e-43 180.3 216 46.3
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.1e-43 180.3 216 46.3
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 4.7e-43 179.1 216 46.3
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 1.4e-42 177.6 273 41.8
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 3.7e-40 169.5 255 42.4
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 7.8e-38 161.8 211 45.5
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 1.1e-36 157.9 202 47.5
CBR_g49480 Chara braunii HOM05D005703 ORTHO05D006643 7.3e-36 155.2 240 38.3
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 3.4e-33 146.4 154 51.9
Cre08.g372000 Chlamydomonas reinhardtii HOM05D005703 ORTHO05D006643 1.2e-27 127.9 255 34.9
MBI01_g29867_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 1.5e-25 120.9 127 55.1
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 3.4e-25 119.8 172 40.7
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 2.2e-24 117.1 140 49.3
PRCOL_00000952 Prasinoderma coloniale HOM05D005703 ORTHO05D006643 2.4e-23 113.6 233 33.5
BcaC01g06448 Brassica carinata HOM05D005703 ORTHO05D006643 5.0e-21 105.9 136 48.5
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 5.6e-20 102.4 127 41.7
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 1.1e-18 98.2 204 35.3
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 2.3e-18 97.1 187 36.4
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 1.7e-16 90.9 243 31.3
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 1.1e-15 88.2 213 33.3
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 1.9e-15 87.4 211 32.7
BolC2t11489H Brassica oleracea HOM05D005703 ORTHO05D006643 2.4e-15 87.0 89 52.8
HanXRQChr14g0433731 Helianthus annuus HOM05D005703 ORTHO05D006643 2.7e-14 83.6 66 66.7
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 3.5e-14 83.2 92 44.6
C02p54250 Brassica napus HOM05D005703 ORTHO05D006643 3.3e-12 76.6 89 49.4
C03p15450 Brassica napus HOM05D005703 ORTHO05D006643 9.5e-12 75.1 103 44.7
MBI01_g29866_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 5.2e-10 69.3 49 63.3
Potri.009G121902 Populus trichocarpa HOM05D005703 ORTHO05D006643 1.2e-09 68.2 99 40.4
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 5.8e-09 65.9 61 55.7
unitig_0.g53 Utricularia gibba HOM05D005703 ORTHO05D006643 1.7e-08 64.3 49 59.2
Cc02_g17080 Coffea canephora HOM05D005703 ORTHO05D006643 2.9e-08 63.5 48 56.2
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 8.4e-08 62.0 67 49.3
AUR62033094 Chenopodium quinoa HOM05D005703 ORTHO05D006643 7.1e-07 58.9 33 78.8
C03p56740 Brassica napus HOM05D005703 ORTHO05D006643 1.6e-06 57.8 79 43.0
QL11p045593 Quercus lobata HOM05D005703 ORTHO05D006643 1.6e-06 57.8 63 39.7
BolC1t00936H Brassica oleracea HOM05D005703 ORTHO05D006643 2.1e-06 57.4 61 49.2


User provided reference genes

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