Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 1.4e-165 586.3 310 100.0
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 1.9e-45 187.2 311 40.2
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 5.6e-45 185.7 311 41.5
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 4.7e-44 182.6 312 40.4
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 3.1e-43 179.9 311 39.2
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 3.1e-43 179.9 312 40.7
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 4.4e-42 176.0 314 39.5
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 5.8e-42 175.6 318 40.9
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 1.3e-41 174.5 314 38.2
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 1.7e-41 174.1 319 39.8
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 8.3e-41 171.8 312 39.1
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 1.1e-40 171.4 312 37.2
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 1.4e-40 171.0 324 38.3
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 1.4e-40 171.0 312 36.5
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 2.4e-40 170.2 310 37.1
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 2.4e-40 170.2 319 40.1
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 3.2e-40 169.9 315 35.6
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 7.0e-40 168.7 311 35.7
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.2e-39 167.9 312 36.5
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 1.2e-39 167.9 319 35.1
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 2.1e-39 167.2 311 37.6
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 2.1e-39 167.2 312 37.2
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 2.7e-39 166.8 311 35.0
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 2.7e-39 166.8 317 38.8
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 3.5e-39 166.4 310 36.1
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 4.6e-39 166.0 310 36.5
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 4.6e-39 166.0 310 36.8
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 6.0e-39 165.6 311 36.3
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 7.8e-39 165.2 329 35.0
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 7.8e-39 165.2 317 37.2
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 1.3e-38 164.5 311 37.0
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 1.3e-38 164.5 319 37.0
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 1.7e-38 164.1 313 36.4
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.7e-38 164.1 316 37.0
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 2.3e-38 163.7 310 36.5
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 2.3e-38 163.7 316 37.0
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 3.9e-38 162.9 309 35.9
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 3.9e-38 162.9 338 35.5
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 3.9e-38 162.9 310 36.1
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 3.9e-38 162.9 311 34.7
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 8.6e-38 161.8 316 36.7
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 1.5e-37 161.0 311 35.0
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 1.5e-37 161.0 336 35.7
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 1.9e-37 160.6 309 36.2
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 2.5e-37 160.2 303 38.9
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 3.3e-37 159.8 304 40.1
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 4.3e-37 159.5 312 36.9
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 5.6e-37 159.1 312 36.2
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 9.5e-37 158.3 314 36.3
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 1.6e-36 157.5 311 36.7
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.2e-36 155.6 326 36.8
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.1e-35 154.8 311 35.7
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 1.4e-35 154.5 314 32.5
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 1.4e-35 154.5 313 36.4
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 1.8e-35 154.1 322 35.7
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 1.8e-35 154.1 314 36.0
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 2.3e-35 153.7 313 32.6
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.3e-35 153.7 306 35.6
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 2.3e-35 153.7 320 34.7
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 3.1e-35 153.3 301 37.2
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 5.2e-35 152.5 318 33.6
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 8.9e-35 151.8 314 36.0
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 1.5e-34 151.0 318 35.2
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 2.0e-34 150.6 314 31.8
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 5.8e-34 149.1 306 35.0
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 3.7e-33 146.4 315 33.3
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 8.3e-33 145.2 315 34.9
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 1.1e-32 144.8 312 33.7
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 2.4e-32 143.7 318 34.9
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.4e-32 143.7 318 36.2
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 5.4e-32 142.5 320 35.9
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 5.4e-32 142.5 314 34.1
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 7.1e-32 142.1 311 32.5
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 1.6e-31 141.0 318 33.6
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 4.6e-31 139.4 321 34.3
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 5.6e-29 132.5 347 29.4
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 8.1e-28 128.6 260 35.0
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 1.8e-27 127.5 282 34.4
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 6.8e-27 125.6 286 33.9
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 6.8e-27 125.6 307 32.9
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 2.0e-26 124.0 305 31.8
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 4.4e-26 122.9 311 31.2
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 1.7e-25 120.9 247 36.8
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 4.9e-25 119.4 307 31.3
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 6.4e-25 119.0 298 31.5
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 1.1e-24 118.2 319 31.7
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 1.3e-22 111.3 150 43.3
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 1.6e-20 104.4 318 30.8
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 4.0e-19 99.8 326 30.4
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 2.0e-18 97.4 344 26.7
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 1.3e-17 94.7 142 42.3
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 4.2e-16 89.7 178 33.7
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 1.9e-13 80.9 98 41.8
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 3.3e-13 80.1 85 48.2
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.1e-11 73.6 225 31.1
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 2.7e-07 60.5 287 24.0
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.3e-06 58.2 61 45.9
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 8.7e-06 55.5 61 44.3


User provided reference genes

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