Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0117 Selaginella moellendorffii HOM05D000181 ORTHO05D007068 6.3e-230 800.4 407 100.0
SMO356G0559 Selaginella moellendorffii HOM05D000181 ORTHO05D007068 2.6e-106 389.8 329 70.2
Lj3g0011719 Lotus japonicus HOM05D000181 ORTHO05D007068 1.7e-49 201.1 355 37.7
QL04p087205 Quercus lobata HOM05D000181 ORTHO05D007068 2.9e-49 200.3 366 35.8
Glyma.08G237500 Glycine max HOM05D000181 ORTHO05D007068 4.1e-48 196.4 356 36.2
Ca_25910_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007068 6.0e-47 192.6 360 35.6
Nn7g38234 Nelumbo nucifera HOM05D000181 ORTHO05D007068 6.0e-47 192.6 363 35.8
MELO3C019635.2 Cucumis melo HOM05D000181 ORTHO05D007068 7.8e-47 192.2 367 34.1
FAN11G1148 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.3e-46 191.4 387 33.6
FAN16G1891 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.7e-46 191.0 352 35.8
Actinidia37132 Actinidia chinensis HOM05D000181 ORTHO05D007068 2.3e-46 190.7 392 34.2
Phvul.011G177500 Phaseolus vulgaris HOM05D000181 ORTHO05D007068 2.3e-46 190.7 353 35.4
ATR0752G106 Amborella trichopoda HOM05D000181 ORTHO05D007068 3.0e-46 190.3 370 33.5
FAN25G2563 Fragaria x ananassa HOM05D000181 ORTHO05D007068 3.9e-46 189.9 387 33.3
FvH4_3g14760 Fragaria vesca HOM05D000181 ORTHO05D007068 6.6e-46 189.1 387 33.3
CSS0042976 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007068 1.1e-45 188.3 351 35.3
FAN21G2082 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.5e-45 188.0 356 35.1
Eucgr.F04462 Eucalyptus grandis HOM05D000181 ORTHO05D007068 1.9e-45 187.6 363 36.9
TAR627G0133 Trochodendron aralioides HOM05D000181 ORTHO05D007068 1.9e-45 187.6 362 35.6
Prupe.4G132700 Prunus persica HOM05D000181 ORTHO05D007068 2.5e-45 187.2 359 34.3
Ciclev10004242m.g Citrus clementina HOM05D000181 ORTHO05D007068 3.3e-45 186.8 345 35.1
RcHm_v2.0_Chr5g0024281 Rosa chinensis HOM05D000181 ORTHO05D007068 7.3e-45 185.7 351 34.5
CANSAT80G1988 Cannabis sativa HOM05D000181 ORTHO05D007068 9.6e-45 185.3 365 32.6
CsaV3_6G013510 Cucumis sativus L. HOM05D000181 ORTHO05D007068 1.2e-44 184.9 353 34.8
Sed0005173 Sechium edule HOM05D000181 ORTHO05D007068 2.8e-44 183.7 380 35.0
MD05G1229800 Malus domestica HOM05D000181 ORTHO05D007068 3.6e-44 183.3 341 34.6
DCAR_013723 Daucus carota HOM05D000181 ORTHO05D007068 4.7e-44 183.0 361 34.6
PSO675G5464 Papaver somniferum HOM05D000181 ORTHO05D007068 4.7e-44 183.0 359 33.4
arahy.Tifrunner.gnm1.ann1.HBHB6G Arachis hypogaea HOM05D000181 ORTHO05D007068 8.1e-44 182.2 400 32.0
Dinv42476 Davidia involucrata HOM05D000181 ORTHO05D007068 8.1e-44 182.2 340 35.3
Sc10g0005160 Simmondsia chinensis HOM05D000181 ORTHO05D007068 8.1e-44 182.2 353 34.8
Medtr8g056860 Medicago truncatula HOM05D000181 ORTHO05D007068 1.1e-43 181.8 356 33.7
PSO675G4612 Papaver somniferum HOM05D000181 ORTHO05D007068 1.1e-43 181.8 354 33.3
SGA_v2.0_scaffold7G03612 Striga asiatica HOM05D000181 ORTHO05D007068 1.4e-43 181.4 344 33.4
Thecc.07G182000 Theobroma cacao HOM05D000181 ORTHO05D007068 1.4e-43 181.4 356 32.9
arahy.Tifrunner.gnm1.ann1.1IB7AW Arachis hypogaea HOM05D000181 ORTHO05D007068 1.8e-43 181.0 400 32.0
Psat4g137600 Pisum sativum HOM05D000181 ORTHO05D007068 3.1e-43 180.3 353 34.0
PGR031G2481 Punica granatum HOM05D000181 ORTHO05D007068 3.1e-43 180.3 356 34.6
Lalb_Chr01g0007221 Lupinus albus HOM05D000181 ORTHO05D007068 4.0e-43 179.9 406 32.5
Migut.M01524 Erythranthe guttata HOM05D000181 ORTHO05D007068 6.8e-43 179.1 363 34.7
Aqoxy1G01434 Aquilegia oxysepala HOM05D000181 ORTHO05D007068 1.5e-42 177.9 348 32.5
ClCG02G018660 Citrullus lanatus HOM05D000181 ORTHO05D007068 2.0e-42 177.6 379 33.2
MSTRG.7078 Avicennia marina HOM05D000181 ORTHO05D007068 2.6e-42 177.2 345 33.0
Duzib213G0016 Durio zibethinus HOM05D000181 ORTHO05D007068 2.6e-42 177.2 327 34.3
AUR62040741 Chenopodium quinoa HOM05D000181 ORTHO05D007068 7.6e-42 175.6 250 39.2
COL.COLO4_19749 Corchorus olitorius HOM05D000181 ORTHO05D007068 9.9e-42 175.3 357 33.1
CARHR073220 Cardamine hirsuta HOM05D000181 ORTHO05D007068 1.3e-41 174.9 316 35.1
THA.LOC104812371 Tarenaya hassleriana HOM05D000181 ORTHO05D007068 1.7e-41 174.5 366 32.5
AUR62032086 Chenopodium quinoa HOM05D000181 ORTHO05D007068 2.2e-41 174.1 269 37.9
Sopen02g023810 Solanum pennellii HOM05D000181 ORTHO05D007068 2.2e-41 174.1 367 33.2
Gohir.D13G128800 Gossypium hirsutum HOM05D000181 ORTHO05D007068 2.9e-41 173.7 364 32.1
Gorai.013G144900 Gossypium raimondii HOM05D000181 ORTHO05D007068 2.9e-41 173.7 364 32.1
Aa31LG4G1430 Aethionema arabicum HOM05D000181 ORTHO05D007068 4.9e-41 172.9 333 33.9
AagrBONN_evm.TU.Sc2ySwM_344.4106 Anthoceros agrestis HOM05D000181 ORTHO05D007068 4.9e-41 172.9 375 31.7
Lj2C14G7 Lonicera japonica HOM05D000181 ORTHO05D007068 4.9e-41 172.9 247 39.3
Manes.06G176300 Manihot esculenta HOM05D000181 ORTHO05D007068 4.9e-41 172.9 361 34.3
Solyc02g079000.4 Solanum lycopersicum HOM05D000181 ORTHO05D007068 4.9e-41 172.9 365 32.6
A07p27070 Brassica napus HOM05D000181 ORTHO05D007068 6.4e-41 172.6 398 29.4
AUR62041059 Chenopodium quinoa HOM05D000181 ORTHO05D007068 6.4e-41 172.6 250 38.4
Potri.010G171300 Populus trichocarpa HOM05D000181 ORTHO05D007068 6.4e-41 172.6 341 35.2
TWI38G0335 Tripterygium wilfordii HOM05D000181 ORTHO05D007068 6.4e-41 172.6 329 33.4
BcaB02g07224 Brassica carinata HOM05D000181 ORTHO05D007068 8.4e-41 172.2 251 35.9
BraA07t30351Z Brassica rapa HOM05D000181 ORTHO05D007068 1.4e-40 171.4 250 36.0
Haze_07800 Corylus avellana HOM05D000181 ORTHO05D007068 1.9e-40 171.0 366 32.8
C06p29810 Brassica napus HOM05D000181 ORTHO05D007068 2.4e-40 170.6 398 29.9
Nitab4.5_0000388g0100 Nicotiana tabacum HOM05D000181 ORTHO05D007068 2.4e-40 170.6 337 33.2
Nitab4.5_0006529g0020 Nicotiana tabacum HOM05D000181 ORTHO05D007068 2.4e-40 170.6 333 32.4
Oeu034062.1 Olea europaea HOM05D000181 ORTHO05D007068 2.4e-40 170.6 331 32.6
BolC6t38142H Brassica oleracea HOM05D000181 ORTHO05D007068 4.2e-40 169.9 398 29.9
GSVIVG01036763001 Vitis vinifera HOM05D000181 ORTHO05D007068 4.2e-40 169.9 253 39.1
Carub.0002s2642 Capsella rubella HOM05D000181 ORTHO05D007068 9.3e-40 168.7 252 36.9
EL10Ac2g03239 Beta vulgaris HOM05D000181 ORTHO05D007068 1.2e-39 168.3 242 38.8
Thhalv10018071m.g Eutrema salsugineum HOM05D000181 ORTHO05D007068 1.2e-39 168.3 398 29.1
CAN.G891.3 Capsicum annuum HOM05D000181 ORTHO05D007068 1.6e-39 167.9 369 32.2
AL2G40200 Arabidopsis lyrata HOM05D000181 ORTHO05D007068 4.6e-39 166.4 308 33.1
HanXRQChr03g0078201 Helianthus annuus HOM05D000181 ORTHO05D007068 1.3e-38 164.9 329 32.5
Sp5g34620 Schrenkiella parvula HOM05D000181 ORTHO05D007068 3.0e-38 163.7 371 33.2
AT1G79560 Arabidopsis thaliana HOM05D000181 ORTHO05D007068 3.9e-38 163.3 337 31.5
Pp3c7_7530 Physcomitrium patens HOM05D000181 ORTHO05D007068 5.1e-38 162.9 377 33.4
Peaxi162Scf00006g01615 Petunia axillaris HOM05D000181 ORTHO05D007068 1.1e-37 161.8 233 40.3
Lsat_1_v5_gn_7_69480 Lactuca sativa HOM05D000181 ORTHO05D007068 2.5e-37 160.6 246 36.6
HPP92_000847 Vanilla planifolia HOM05D000181 ORTHO05D007068 9.6e-37 158.7 339 32.4
ECA240G0620 Erigeron canadensis HOM05D000181 ORTHO05D007068 1.6e-36 157.9 248 36.3
Sabra10G0130900 Salix brachista HOM05D000181 ORTHO05D007068 6.2e-36 156.0 393 30.3
Mapoly0006s0083 Marchantia polymorpha HOM05D000181 ORTHO05D007068 1.6e-28 131.3 321 30.2
MD10G1209400 Malus domestica HOM05D000181 ORTHO05D007068 4.0e-27 126.7 187 38.0
Cc04_g12710 Coffea canephora HOM05D000181 ORTHO05D007068 1.5e-26 124.8 202 35.6
CDE06G0559 Ceratophyllum demersum HOM05D000181 ORTHO05D007068 1.2e-23 115.2 179 35.2
Oeu044451.1 Olea europaea HOM05D000181 ORTHO05D007068 1.6e-23 114.8 368 27.2
Gohir.A13G125100 Gossypium hirsutum HOM05D000181 ORTHO05D007068 1.8e-22 111.3 160 37.5
unitig_748.g7620 Utricularia gibba HOM05D000181 ORTHO05D007068 1.3e-20 105.1 320 28.4
TPR.G39991 Trifolium pratense HOM05D000181 ORTHO05D007068 1.9e-16 91.3 105 41.9
Cc00_g35400 Coffea canephora HOM05D000181 ORTHO05D007068 4.2e-16 90.1 175 34.9
Cc05_g01540 Coffea canephora HOM05D039105 ORTHO05D029056 5.5e-16 89.7 96 47.9
CiPaw.11G060800 Carya illinoinensis HOM05D000181 ORTHO05D007068 7.1e-16 89.4 105 41.9
Cc00_g28520 Coffea canephora HOM05D000181 ORTHO05D007068 2.2e-09 67.8 69 44.9
TPR.G9423 Trifolium pratense HOM05D000181 ORTHO05D007068 2.2e-09 67.8 170 32.9
Cc00_g28370 Coffea canephora HOM05D000181 ORTHO05D007068 7.1e-08 62.8 68 42.6
SEGI_28435 Sequoiadendron giganteum HOM05D000181 ORTHO05D007068 2.1e-07 61.2 147 34.7
Cc00_g33510 Coffea canephora HOM05D039105 ORTHO05D029056 6.1e-07 59.7 62 51.6
CAN.G1460.1 Capsicum annuum HOM05D000181 ORTHO05D007068 1.0e-06 58.9 68 41.2
VMungo1127G0531 Vigna mungo HOM05D000002 ORTHO05D007068 5.1e-06 56.6 68 47.1


User provided reference genes

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