Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 0.0e+00 1122.1 573 100.0
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 3.0e-52 210.7 673 28.4
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 1.6e-50 204.9 628 28.5
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 3.7e-50 203.8 626 28.4
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.5e-48 198.4 627 28.2
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 1.5e-48 198.4 626 29.1
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 2.0e-48 198.0 599 28.7
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 2.6e-48 197.6 596 29.4
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 2.6e-48 197.6 628 28.0
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 5.8e-48 196.4 593 28.5
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 8.4e-47 192.6 607 29.3
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 1.4e-46 191.8 588 29.6
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 1.4e-46 191.8 618 28.5
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 2.5e-46 191.0 619 29.1
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 9.3e-46 189.1 535 29.9
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 1.3e-44 185.3 623 27.3
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 1.8e-44 184.9 589 30.6
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 2.3e-44 184.5 619 28.3
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 3.9e-44 183.7 635 27.6
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 3.9e-44 183.7 617 27.9
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 3.9e-44 183.7 587 30.2
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 6.7e-44 183.0 612 28.9
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 8.7e-44 182.6 548 28.8
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 8.7e-44 182.6 502 30.7
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 8.7e-44 182.6 607 29.7
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 1.1e-43 182.2 548 28.8
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 1.1e-43 182.2 611 28.8
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 1.5e-43 181.8 584 29.1
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 1.5e-43 181.8 617 27.6
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 1.5e-43 181.8 615 28.3
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 2.5e-43 181.0 609 28.6
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 2.5e-43 181.0 609 28.6
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 2.5e-43 181.0 616 28.1
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 2.5e-43 181.0 566 29.3
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 4.3e-43 180.3 651 27.8
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 4.3e-43 180.3 611 28.0
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 5.6e-43 179.9 612 28.6
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 5.6e-43 179.9 610 28.0
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 5.6e-43 179.9 612 28.3
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 7.4e-43 179.5 649 27.1
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 7.4e-43 179.5 526 28.3
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 9.6e-43 179.1 609 28.4
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 1.3e-42 178.7 608 27.6
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 2.1e-42 177.9 612 28.4
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 2.8e-42 177.6 638 27.9
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 3.7e-42 177.2 592 30.4
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 8.2e-42 176.0 638 28.1
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 1.4e-41 175.3 629 27.7
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 2.4e-41 174.5 634 27.3
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 2.4e-41 174.5 540 28.0
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 2.4e-41 174.5 574 27.7
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 3.1e-41 174.1 614 27.7
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 3.1e-41 174.1 633 28.4
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 4.0e-41 173.7 630 26.3
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 5.3e-41 173.3 551 27.6
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 6.9e-41 172.9 494 31.0
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 6.9e-41 172.9 541 27.9
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 9.0e-41 172.6 587 27.8
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 1.5e-40 171.8 596 28.0
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 2.6e-40 171.0 612 28.6
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 2.6e-40 171.0 628 27.5
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 4.5e-40 170.2 623 27.9
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 7.6e-40 169.5 534 28.8
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 2.2e-39 167.9 631 28.5
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 8.4e-39 166.0 634 27.4
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 1.4e-38 165.2 523 28.7
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 1.9e-38 164.9 615 27.5
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 2.5e-38 164.5 614 28.0
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 1.5e-35 155.2 580 25.5
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 1.5e-35 155.2 645 26.0
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 4.3e-35 153.7 616 26.5
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 1.3e-34 152.1 485 30.1
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 5.3e-33 146.7 592 25.5
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 1.2e-32 145.6 634 25.7
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 2.0e-32 144.8 312 34.9
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 3.4e-32 144.1 575 25.4
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 4.5e-32 143.7 685 25.5
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 2.5e-30 137.9 484 29.1
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 6.1e-29 133.3 614 25.9
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 1.3e-26 125.6 258 36.8
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.7e-26 125.2 406 30.5
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 3.7e-26 124.0 724 23.5
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 1.1e-25 122.5 255 36.5
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 4.1e-25 120.6 361 31.0
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 9.1e-25 119.4 406 30.5
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.2e-24 119.0 622 24.0
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 2.6e-24 117.9 255 34.9
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 2.9e-23 114.4 230 36.5
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 1.6e-21 108.6 328 32.0
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 1.8e-20 105.1 294 31.6
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 2.3e-20 104.8 252 35.7
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 2.8e-18 97.8 372 27.2
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 3.5e-16 90.9 230 32.2
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 3.3e-11 74.3 187 34.2
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 4.8e-10 70.5 138 37.7
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 4.8e-10 70.5 216 26.9
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 5.3e-09 67.0 124 38.7
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 5.3e-09 67.0 124 38.7
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 2.2e-07 61.6 227 27.8
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 3.8e-07 60.8 127 29.1
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 5.0e-07 60.5 96 41.7
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 1.5e-06 58.9 181 24.9
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 1.9e-06 58.5 116 33.6


User provided reference genes

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