Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.0e-179 633.3 308 100.0
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.4e-112 410.2 300 64.3
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.4e-112 410.2 300 64.3
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.7e-110 403.3 308 64.0
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 7.1e-109 397.9 305 63.0
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.3e-107 393.7 301 62.8
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 2.3e-107 392.9 303 62.4
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 2.3e-107 392.9 306 61.1
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 8.7e-107 391.0 306 61.4
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 1.1e-106 390.6 301 62.1
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 1.5e-106 390.2 303 63.0
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.9e-106 389.8 303 62.4
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 2.5e-106 389.4 301 61.1
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 3.3e-106 389.0 305 61.6
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.3e-106 389.0 303 62.0
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 4.3e-106 388.7 302 63.2
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 5.6e-106 388.3 303 62.0
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 5.6e-106 388.3 305 61.6
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 7.3e-106 387.9 305 62.0
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 9.6e-106 387.5 301 62.5
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 9.6e-106 387.5 305 61.6
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.1e-105 386.3 301 62.1
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 2.1e-105 386.3 301 61.8
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.8e-105 386.0 303 61.4
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.8e-105 386.0 307 60.9
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 2.8e-105 386.0 306 60.8
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.6e-105 385.6 303 61.4
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 3.6e-105 385.6 307 60.9
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.6e-105 385.6 307 60.9
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 4.8e-105 385.2 301 61.8
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 6.2e-105 384.8 304 60.9
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 6.2e-105 384.8 306 60.8
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 6.2e-105 384.8 305 60.0
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 6.2e-105 384.8 300 61.0
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 8.1e-105 384.4 303 62.0
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 1.1e-104 384.0 303 62.0
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 1.1e-104 384.0 301 60.8
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.4e-104 383.6 304 61.5
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.8e-104 383.3 302 60.3
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 2.4e-104 382.9 301 60.8
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 3.1e-104 382.5 296 61.5
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 4.0e-104 382.1 301 61.1
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 4.0e-104 382.1 308 60.4
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 5.3e-104 381.7 308 61.0
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 6.9e-104 381.3 301 62.1
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 6.9e-104 381.3 301 62.1
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 9.0e-104 380.9 303 59.7
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 1.2e-103 380.6 303 60.1
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.5e-103 380.2 301 60.1
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 2.0e-103 379.8 308 61.0
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 2.0e-103 379.8 303 60.4
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 2.6e-103 379.4 308 61.0
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 2.6e-103 379.4 304 61.5
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 3.4e-103 379.0 303 61.4
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 4.5e-103 378.6 305 61.0
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 4.5e-103 378.6 304 61.2
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 5.8e-103 378.3 301 61.1
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 5.8e-103 378.3 304 60.9
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 5.8e-103 378.3 301 59.8
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 7.6e-103 377.9 308 61.4
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 9.9e-103 377.5 308 60.4
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.3e-102 377.1 308 60.7
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.3e-102 377.1 303 60.7
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.7e-102 376.7 301 59.8
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.7e-102 376.7 300 61.0
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 2.2e-102 376.3 305 60.3
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 3.8e-102 375.6 307 59.0
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.9e-102 375.2 303 59.1
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 4.9e-102 375.2 305 60.7
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.9e-101 373.2 304 59.9
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.9e-101 373.2 308 59.7
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.9e-101 373.2 303 60.1
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 3.2e-101 372.5 301 59.8
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 3.2e-101 372.5 303 60.1
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 3.2e-101 372.5 303 60.1
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 4.2e-101 372.1 298 61.7
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 5.4e-101 371.7 305 60.3
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.2e-100 370.5 303 58.1
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.1e-100 369.8 303 58.7
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 3.5e-100 369.0 301 58.5
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.8e-99 366.7 306 58.5
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 3.0e-99 365.9 304 58.2
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 3.0e-99 365.9 303 58.4
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 5.1e-99 365.2 303 58.7
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.1e-98 364.0 306 58.5
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 5.6e-98 361.7 298 59.1
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.6e-97 360.1 306 58.5
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.7e-97 359.0 303 58.1
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 4.8e-97 358.6 311 56.3
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 6.9e-96 354.8 306 55.2
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 2.0e-95 353.2 306 55.2
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 3.4e-95 352.4 362 50.6
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 4.2e-93 345.5 280 58.6
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 3.5e-92 342.4 305 56.4
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 5.8e-87 325.1 306 54.2
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 3.7e-81 305.8 265 57.4
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.6e-76 290.4 238 59.7
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 6.7e-75 285.0 235 59.6
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.0e-74 283.5 305 49.2
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 9.7e-74 281.2 225 60.0
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.0e-70 271.2 227 59.0
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 4.7e-68 262.3 229 56.8
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 3.9e-67 259.2 203 62.6
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 2.8e-65 253.1 277 45.8
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 3.1e-64 249.6 222 57.7
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 7.0e-64 248.4 283 43.5
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.5e-61 238.8 202 57.9
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 2.1e-60 236.9 199 58.8
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 4.2e-53 212.6 201 53.7
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 4.2e-53 212.6 201 53.7
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.8e-43 180.6 120 67.5
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 8.6e-38 161.8 143 53.8
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 3.1e-32 143.3 193 43.5
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 3.6e-28 129.8 126 52.4
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 1.3e-25 121.3 87 63.2
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 7.8e-23 112.1 106 51.9
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.8e-20 103.6 70 68.6
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 2.6e-18 97.1 114 39.5
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 7.5e-18 95.5 94 48.9
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 4.1e-16 89.7 119 40.3
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 7.3e-13 79.0 75 49.3
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 8.1e-12 75.5 58 62.1
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.3e-09 68.2 132 28.8
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 4.6e-07 59.7 41 63.4


User provided reference genes

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