Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 7.2e-158 560.5 270 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.4e-63 247.3 279 45.5
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 1.4e-63 247.3 269 43.5
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 3.1e-60 236.1 269 41.6
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 1.6e-51 207.2 272 39.7
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.9e-51 205.3 270 40.0
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.9e-51 205.3 270 40.0
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 2.9e-50 203.0 272 40.1
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 3.8e-50 202.6 271 39.1
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 3.8e-50 202.6 271 40.2
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 5.0e-50 202.2 272 40.8
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.1e-49 201.1 272 39.7
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.2e-48 197.6 273 38.5
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 2.1e-48 196.8 274 40.5
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 2.1e-48 196.8 272 39.3
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 4.7e-48 195.7 269 38.7
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 4.7e-48 195.7 263 38.8
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 4.7e-48 195.7 272 38.6
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 6.1e-48 195.3 255 41.2
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 8.0e-48 194.9 270 36.7
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 4.0e-47 192.6 270 38.1
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 4.0e-47 192.6 272 38.6
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 4.0e-47 192.6 270 37.8
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 3.4e-46 189.5 272 38.2
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 4.4e-46 189.1 272 37.9
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 4.4e-46 189.1 270 37.8
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 7.5e-46 188.3 270 38.1
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 9.8e-46 188.0 265 38.5
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 1.3e-45 187.6 275 36.7
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 2.2e-45 186.8 272 37.9
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.8e-45 186.4 268 37.7
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.8e-45 186.4 257 38.5
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 2.8e-45 186.4 272 37.9
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 3.7e-45 186.0 272 37.9
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 4.9e-45 185.7 270 37.4
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 4.9e-45 185.7 267 38.2
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 4.9e-45 185.7 271 37.6
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 8.3e-45 184.9 261 37.9
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 8.3e-45 184.9 261 37.9
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 8.3e-45 184.9 261 36.8
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.1e-44 184.5 272 37.9
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 1.1e-44 184.5 270 36.7
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 1.4e-44 184.1 269 36.8
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 2.4e-44 183.3 271 37.6
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 5.4e-44 182.2 272 37.5
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 7.0e-44 181.8 270 35.6
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 9.1e-44 181.4 272 38.2
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 9.1e-44 181.4 270 35.6
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 1.6e-43 180.6 265 38.1
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 2.0e-43 180.3 274 37.6
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 2.0e-43 180.3 270 36.7
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 2.0e-43 180.3 272 37.9
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.0e-43 180.3 272 37.1
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 2.7e-43 179.9 272 37.1
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 2.7e-43 179.9 272 37.1
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 3.5e-43 179.5 270 36.3
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 7.7e-43 178.3 272 38.6
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 7.7e-43 178.3 272 36.4
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.0e-42 177.9 270 35.9
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 1.7e-42 177.2 247 39.3
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 2.3e-42 176.8 272 37.9
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 2.3e-42 176.8 272 37.9
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 2.3e-42 176.8 272 37.9
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 2.3e-42 176.8 272 37.9
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 2.9e-42 176.4 270 37.4
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 2.9e-42 176.4 260 38.1
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 2.9e-42 176.4 271 37.3
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.9e-42 176.4 281 37.7
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 5.0e-42 175.6 271 37.3
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 5.0e-42 175.6 272 37.5
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 5.0e-42 175.6 265 37.4
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 6.6e-42 175.3 272 36.4
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 8.6e-42 174.9 272 36.0
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.5e-41 174.1 274 36.1
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 1.9e-41 173.7 273 35.5
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 1.9e-41 173.7 263 37.3
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 2.5e-41 173.3 265 36.6
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 3.3e-41 172.9 272 37.1
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 5.6e-41 172.2 272 37.5
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 7.2e-41 171.8 268 35.1
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 7.2e-41 171.8 252 37.3
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 1.6e-40 170.6 272 36.4
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 1.6e-40 170.6 263 36.5
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 2.1e-40 170.2 252 37.3
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.4e-39 167.5 200 42.0
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 2.3e-39 166.8 216 40.7
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 4.0e-39 166.0 271 35.4
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 2.9e-37 159.8 263 34.6
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 6.4e-37 158.7 263 34.2
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 6.4e-37 158.7 270 34.1
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 1.1e-36 157.9 270 35.6
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 2.4e-36 156.8 270 34.8
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 5.4e-36 155.6 235 37.4
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 1.7e-34 150.6 258 34.1
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 8.0e-32 141.7 267 33.0
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 3.4e-30 136.3 257 31.9
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 9.8e-30 134.8 186 39.8
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 7.0e-28 128.6 270 31.1
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 4.3e-25 119.4 200 34.5
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 5.6e-25 119.0 139 43.2
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 7.3e-25 118.6 166 42.8
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 9.2e-20 101.7 197 31.0
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 6.0e-19 99.0 114 43.9
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 6.0e-19 99.0 114 43.9
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 2.3e-18 97.1 189 33.3
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.6e-16 90.9 78 53.8
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 4.0e-15 86.3 97 46.4
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 6.4e-13 79.0 127 31.5
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 4.6e-11 72.8 145 28.3
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.7e-10 70.9 204 27.9
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.2e-08 64.7 152 32.2


User provided reference genes

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