Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 8.3e-94 347.1 177 100.0
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 2.7e-28 129.4 112 56.2
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 1.4e-24 117.1 117 52.1
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.4e-24 117.1 115 53.0
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 4.0e-24 115.5 137 46.0
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 1.5e-23 113.6 125 50.4
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 2.0e-23 113.2 128 50.0
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 2.6e-23 112.8 126 48.4
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 3.4e-23 112.5 137 44.5
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 4.5e-23 112.1 108 50.0
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 4.5e-23 112.1 104 56.7
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 7.6e-23 111.3 70 71.4
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 7.6e-23 111.3 70 71.4
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 1.0e-22 110.9 104 51.0
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 1.3e-22 110.5 70 70.0
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 1.3e-22 110.5 125 48.0
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.7e-22 110.2 130 46.9
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 1.7e-22 110.2 119 52.1
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 2.2e-22 109.8 106 50.0
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 2.2e-22 109.8 106 50.0
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 2.2e-22 109.8 140 45.7
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 3.8e-22 109.0 105 51.4
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 3.8e-22 109.0 97 53.6
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 3.8e-22 109.0 106 54.7
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 3.8e-22 109.0 107 51.4
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 4.9e-22 108.6 105 50.5
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 8.4e-22 107.8 107 49.5
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 8.4e-22 107.8 105 52.4
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 8.4e-22 107.8 105 52.4
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.4e-22 107.8 145 47.6
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.4e-22 107.8 145 47.6
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 8.4e-22 107.8 104 50.0
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 8.4e-22 107.8 73 67.1
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 8.4e-22 107.8 124 50.0
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.1e-21 107.5 105 52.4
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.1e-21 107.5 105 52.4
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.1e-21 107.5 105 52.4
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.1e-21 107.5 74 64.9
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 1.1e-21 107.5 104 51.9
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 1.1e-21 107.5 94 55.3
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.1e-21 107.5 70 65.7
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.4e-21 107.1 78 64.1
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.4e-21 107.1 88 60.2
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.4e-21 107.1 124 47.6
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 1.4e-21 107.1 101 55.4
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 1.9e-21 106.7 146 40.4
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.9e-21 106.7 70 65.7
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 1.9e-21 106.7 142 43.0
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 2.5e-21 106.3 95 55.8
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 3.2e-21 105.9 98 57.1
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 5.5e-21 105.1 100 55.0
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 5.5e-21 105.1 120 46.7
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 5.5e-21 105.1 96 53.1
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 5.5e-21 105.1 96 54.2
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 7.1e-21 104.8 96 54.2
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 9.3e-21 104.4 120 49.2
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 9.3e-21 104.4 70 64.3
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 1.2e-20 104.0 70 67.1
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.2e-20 104.0 86 60.5
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 1.2e-20 104.0 110 49.1
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 1.6e-20 103.6 70 62.9
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 2.1e-20 103.2 70 62.9
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 2.1e-20 103.2 133 45.1
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 2.1e-20 103.2 108 50.0
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 2.1e-20 103.2 124 46.8
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 3.5e-20 102.4 137 45.3
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 3.5e-20 102.4 93 54.8
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 3.5e-20 102.4 104 51.9
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 4.6e-20 102.1 83 59.0
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 4.6e-20 102.1 95 55.8
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 6.0e-20 101.7 70 61.4
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 6.0e-20 101.7 70 61.4
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 6.0e-20 101.7 70 61.4
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 6.0e-20 101.7 70 61.4
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 6.0e-20 101.7 113 43.4
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 7.9e-20 101.3 70 64.3
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 7.9e-20 101.3 70 64.3
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 7.9e-20 101.3 171 39.8
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 7.9e-20 101.3 111 47.7
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.0e-19 100.9 110 46.4
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 1.3e-19 100.5 132 44.7
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 1.8e-19 100.1 129 44.2
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 1.8e-19 100.1 95 53.7
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 1.8e-19 100.1 67 65.7
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 2.3e-19 99.8 121 46.3
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 3.0e-19 99.4 102 50.0
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 3.0e-19 99.4 102 50.0
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 3.0e-19 99.4 93 52.7
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 3.9e-19 99.0 131 43.5
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 6.7e-19 98.2 130 42.3
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 6.7e-19 98.2 125 48.8
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 9.6e-18 94.4 87 50.6
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.3e-17 94.0 114 47.4
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.7e-17 92.4 114 46.5
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 2.0e-15 86.7 65 64.6
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 1.3e-14 84.0 68 58.8
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 1.4e-13 80.5 100 45.0
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.9e-13 80.1 141 34.8
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 2.5e-13 79.7 169 33.1
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 4.3e-10 68.9 107 35.5
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 3.4e-07 59.3 80 42.5


User provided reference genes

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