Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.9e-110 402.5 203 100.0
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.2e-99 366.7 204 92.2
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-79 298.9 204 74.5
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.5e-78 296.6 203 71.4
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 4.3e-78 295.0 203 70.9
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 1.6e-77 293.1 203 70.4
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 3.6e-77 292.0 203 70.4
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 4.7e-77 291.6 203 69.5
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 6.2e-77 291.2 203 69.5
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 6.2e-77 291.2 203 70.4
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 6.2e-77 291.2 203 70.4
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 6.2e-77 291.2 203 70.0
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 1.4e-76 290.0 203 69.5
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.8e-76 289.7 202 69.8
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 1.8e-76 289.7 203 70.9
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 1.8e-76 289.7 203 70.0
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 2.3e-76 289.3 203 69.5
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 3.1e-76 288.9 203 69.0
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 4.0e-76 288.5 203 69.0
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 6.8e-76 287.7 203 68.5
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 8.9e-76 287.3 203 70.4
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 1.2e-75 287.0 203 69.5
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 1.5e-75 286.6 203 69.0
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 2.0e-75 286.2 203 68.5
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 2.6e-75 285.8 202 68.3
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 5.8e-75 284.6 203 68.0
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 5.8e-75 284.6 203 68.0
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 5.8e-75 284.6 203 67.5
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 7.5e-75 284.3 203 69.5
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 7.5e-75 284.3 203 68.0
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 7.5e-75 284.3 203 68.5
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 7.5e-75 284.3 203 68.5
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 9.8e-75 283.9 203 68.5
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 9.8e-75 283.9 203 68.0
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 9.8e-75 283.9 201 68.2
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 1.3e-74 283.5 203 68.0
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.3e-74 283.5 203 68.0
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 1.3e-74 283.5 203 68.0
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 1.3e-74 283.5 203 68.0
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 1.7e-74 283.1 203 67.5
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 1.7e-74 283.1 203 67.5
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 1.7e-74 283.1 203 68.0
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 1.7e-74 283.1 203 67.5
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 2.9e-74 282.3 203 67.0
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 3.7e-74 282.0 203 68.0
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 4.9e-74 281.6 203 67.0
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 6.4e-74 281.2 203 68.0
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 6.4e-74 281.2 203 67.5
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 6.4e-74 281.2 203 67.0
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 6.4e-74 281.2 203 67.0
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 8.3e-74 280.8 201 67.2
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 8.3e-74 280.8 203 67.0
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 1.1e-73 280.4 203 69.5
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 1.1e-73 280.4 203 67.5
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 1.9e-73 279.6 203 67.5
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 3.2e-73 278.9 203 66.5
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 4.1e-73 278.5 203 65.5
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 4.1e-73 278.5 217 64.1
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 4.1e-73 278.5 203 67.5
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 5.4e-73 278.1 203 66.5
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.4e-73 278.1 203 66.5
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 5.4e-73 278.1 203 66.0
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 5.4e-73 278.1 201 66.7
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 7.1e-73 277.7 203 66.5
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 7.1e-73 277.7 203 66.5
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 7.1e-73 277.7 203 67.5
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 9.2e-73 277.3 203 67.5
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 9.2e-73 277.3 203 67.5
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 1.2e-72 276.9 201 66.7
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 1.2e-72 276.9 203 65.0
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 1.2e-72 276.9 203 67.0
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 1.2e-72 276.9 203 66.0
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 1.6e-72 276.6 203 67.0
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 1.6e-72 276.6 203 67.0
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 1.6e-72 276.6 205 67.3
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 2.1e-72 276.2 203 65.0
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 2.1e-72 276.2 203 65.5
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.7e-72 275.8 203 66.0
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 2.7e-72 275.8 203 66.5
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 2.7e-72 275.8 203 66.5
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 3.5e-72 275.4 203 67.0
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 3.5e-72 275.4 203 65.5
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 6.0e-72 274.6 203 64.5
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 6.0e-72 274.6 203 64.5
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 6.0e-72 274.6 203 64.5
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 6.0e-72 274.6 203 64.5
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 6.0e-72 274.6 203 64.5
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 7.8e-72 274.2 203 66.5
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 7.8e-72 274.2 203 67.5
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 1.0e-71 273.9 203 65.0
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 1.0e-71 273.9 203 67.5
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.0e-71 273.9 203 65.0
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.0e-71 273.9 203 65.0
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 1.0e-71 273.9 203 65.0
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 1.0e-71 273.9 203 68.0
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 1.3e-71 273.5 203 66.0
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 1.3e-71 273.5 203 64.0
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 1.3e-71 273.5 203 65.5
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 2.3e-71 272.7 203 65.5
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 2.3e-71 272.7 203 68.0
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 3.9e-71 271.9 203 66.0
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 5.1e-71 271.6 203 68.0
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 5.1e-71 271.6 203 65.5
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 8.6e-71 270.8 203 65.0
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 1.1e-70 270.4 203 64.0
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 1.9e-70 269.6 203 64.5
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 2.5e-70 269.2 203 64.0
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 3.3e-70 268.9 203 61.6
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 3.3e-70 268.9 203 64.5
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 4.3e-70 268.5 203 63.1
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 1.2e-69 266.9 203 63.5
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 2.3e-63 246.1 201 61.7
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 2.4e-57 226.1 203 56.2
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.1e-54 217.2 150 68.0
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 7.1e-49 198.0 143 63.6
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 9.6e-46 187.6 204 45.1
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 1.7e-42 176.8 203 43.8
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.6e-40 170.2 122 65.6
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 2.9e-34 149.4 202 38.1
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.9e-33 146.7 102 67.6
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 1.4e-25 120.6 83 63.9
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 2.5e-25 119.8 87 69.0
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.2e-24 117.5 81 70.4
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 6.9e-20 101.7 65 67.7


User provided reference genes

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