Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 2.8e-92 342.0 186 100.0
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 2.7e-47 192.6 174 58.0
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 3.6e-47 192.2 176 56.2
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 1.4e-46 190.3 185 55.1
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 5.2e-46 188.3 176 58.0
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 8.8e-46 187.6 174 56.9
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 1.1e-45 187.2 174 56.3
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 1.1e-45 187.2 174 55.2
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 1.1e-45 187.2 174 56.9
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 2.0e-45 186.4 177 53.7
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 2.0e-45 186.4 174 55.2
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 2.6e-45 186.0 174 56.3
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 3.3e-45 185.7 174 54.6
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 3.3e-45 185.7 176 55.1
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 4.4e-45 185.3 174 54.6
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 4.4e-45 185.3 174 55.2
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 7.4e-45 184.5 174 56.9
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 7.4e-45 184.5 170 57.1
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 2.8e-44 182.6 170 57.1
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 6.3e-44 181.4 174 54.0
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 8.2e-44 181.0 174 56.3
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 1.1e-43 180.6 174 56.3
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.4e-43 180.3 176 55.1
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.8e-43 179.9 170 56.5
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 3.1e-43 179.1 174 55.7
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 4.1e-43 178.7 174 52.9
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 5.3e-43 178.3 168 57.7
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 1.6e-42 176.8 166 56.0
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 1.6e-42 176.8 176 53.4
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 5.9e-42 174.9 187 50.8
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.0e-41 174.1 177 52.0
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.0e-41 174.1 176 52.8
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 1.3e-41 173.7 174 53.4
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 1.3e-41 173.7 174 52.3
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 1.3e-41 173.7 176 52.3
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 2.9e-41 172.6 170 52.9
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 6.5e-41 171.4 171 53.2
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 6.5e-41 171.4 170 52.4
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 6.5e-41 171.4 170 52.4
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 8.5e-41 171.0 171 53.2
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 7.2e-40 167.9 176 51.1
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 7.2e-40 167.9 176 50.6
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 1.2e-39 167.2 167 52.7
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 3.6e-39 165.6 170 51.2
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 6.1e-39 164.9 169 50.3
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 1.8e-38 163.3 161 52.2
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 2.3e-38 162.9 183 50.8
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 2.3e-38 162.9 161 52.8
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 2.3e-38 162.9 176 49.4
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 3.0e-38 162.5 187 48.7
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 4.0e-38 162.2 171 49.1
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 4.0e-38 162.2 174 49.4
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 4.0e-38 162.2 174 51.1
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 6.7e-38 161.4 171 50.9
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 6.7e-38 161.4 176 47.7
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 8.8e-38 161.0 169 49.1
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 8.8e-38 161.0 169 49.1
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 2.0e-37 159.8 176 48.9
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 2.6e-37 159.5 186 48.4
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 5.7e-37 158.3 174 51.7
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 5.7e-37 158.3 170 51.2
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 9.7e-37 157.5 171 49.7
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.3e-36 157.1 171 50.9
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 2.8e-36 156.0 170 48.8
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 3.7e-36 155.6 174 49.4
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.4e-35 153.7 174 48.3
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 1.4e-35 153.7 166 50.6
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.4e-35 153.7 166 50.0
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 4.1e-35 152.1 176 48.3
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 5.3e-35 151.8 174 48.3
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 7.0e-35 151.4 178 46.1
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 9.1e-35 151.0 174 48.3
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 7.7e-34 147.9 173 47.4
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 1.0e-33 147.5 153 51.6
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 1.7e-33 146.7 170 50.0
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 2.2e-33 146.4 174 48.9
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 4.2e-32 142.1 164 49.4
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 4.2e-32 142.1 180 46.7
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 5.5e-32 141.7 171 46.8
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 3.6e-31 139.0 180 45.0
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 6.1e-31 138.3 170 47.1
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.0e-30 137.5 145 49.0
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 1.0e-30 137.5 217 40.6
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 1.0e-30 137.5 171 47.4
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.4e-30 137.1 134 51.5
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 2.3e-30 136.3 146 51.4
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 3.0e-30 136.0 180 42.8
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 3.0e-30 136.0 164 49.4
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 5.2e-30 135.2 154 51.3
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 5.2e-30 135.2 137 54.0
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.2e-29 134.0 133 51.1
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 7.5e-29 131.3 143 51.7
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 1.7e-28 130.2 176 44.3
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.7e-28 129.0 128 53.9
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 1.4e-27 127.1 125 56.0
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 7.7e-26 121.3 126 50.8
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.5e-24 117.1 137 50.4
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 1.6e-23 113.6 128 47.7
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 1.4e-22 110.5 167 40.7
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 4.4e-21 105.5 138 46.4
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 3.1e-19 99.4 178 37.1
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 2.0e-18 96.7 146 39.0
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 7.8e-18 94.7 180 36.7
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 1.0e-17 94.4 170 37.1
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 4.3e-16 89.0 176 36.9
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 5.6e-16 88.6 171 36.3
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 8.0e-15 84.7 102 46.1
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 8.0e-15 84.7 130 36.2
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 4.4e-13 79.0 101 45.5
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 9.8e-13 77.8 161 33.5
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 1.1e-11 74.3 72 55.6
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 6.0e-10 68.6 100 41.0
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 6.0e-10 68.6 174 31.6
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 2.5e-08 63.2 52 61.5
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 3.6e-07 59.3 99 36.4
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 8.0e-07 58.2 60 50.0
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.1e-06 57.8 63 46.0
BraA05t20121Z Brassica rapa HOM05D006133 ORTHO05D007855 2.3e-06 56.6 49 59.2
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 3.1e-06 56.2 99 35.4


User provided reference genes

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