Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 7.8e-33 143.3 76 100.0
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 1.3e-19 99.4 72 70.8
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 4.9e-19 97.4 70 71.4
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 6.4e-19 97.1 76 63.2
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.1e-18 96.3 76 65.8
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 1.4e-18 95.9 76 63.2
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 4.1e-18 94.4 76 64.5
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 4.1e-18 94.4 76 64.5
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 5.4e-18 94.0 70 65.7
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 5.4e-18 94.0 76 60.5
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 7.1e-18 93.6 70 70.0
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 7.1e-18 93.6 76 63.2
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 9.2e-18 93.2 76 60.5
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 9.2e-18 93.2 76 60.5
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.6e-17 92.4 70 64.3
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 1.6e-17 92.4 76 60.5
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 2.1e-17 92.0 76 59.2
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 2.1e-17 92.0 73 63.0
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 2.1e-17 92.0 73 63.0
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 2.1e-17 92.0 70 68.6
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 2.7e-17 91.7 71 67.6
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 2.7e-17 91.7 76 61.8
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 2.7e-17 91.7 76 64.5
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 3.5e-17 91.3 70 67.1
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 3.5e-17 91.3 76 60.5
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 4.6e-17 90.9 76 57.9
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 4.6e-17 90.9 76 59.2
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 4.6e-17 90.9 76 59.2
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 4.6e-17 90.9 76 60.5
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 4.6e-17 90.9 76 60.5
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 6.0e-17 90.5 76 59.2
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 6.0e-17 90.5 76 59.2
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 6.0e-17 90.5 69 65.2
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 6.0e-17 90.5 76 60.5
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 6.0e-17 90.5 76 61.8
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 7.8e-17 90.1 73 63.0
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 7.8e-17 90.1 76 60.5
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 7.8e-17 90.1 76 60.5
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 1.0e-16 89.7 76 56.6
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 1.0e-16 89.7 76 60.5
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 1.0e-16 89.7 76 61.8
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 1.0e-16 89.7 76 57.9
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 1.3e-16 89.4 76 57.9
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.3e-16 89.4 76 59.2
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 1.3e-16 89.4 76 57.9
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 1.7e-16 89.0 70 65.7
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.7e-16 89.0 76 57.9
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 1.7e-16 89.0 76 60.5
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 2.3e-16 88.6 70 62.9
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.3e-16 88.6 76 57.9
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 2.3e-16 88.6 76 59.2
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 2.3e-16 88.6 76 56.6
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 2.3e-16 88.6 69 66.7
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 3.0e-16 88.2 70 64.3
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 3.0e-16 88.2 76 57.9
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 3.0e-16 88.2 76 56.6
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 3.0e-16 88.2 76 56.6
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 3.0e-16 88.2 74 58.1
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 3.9e-16 87.8 69 65.2
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 3.9e-16 87.8 76 57.9
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 5.1e-16 87.4 73 61.6
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 5.1e-16 87.4 76 56.6
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 5.1e-16 87.4 76 60.5
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 5.1e-16 87.4 76 60.5
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 5.1e-16 87.4 76 59.2
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 6.6e-16 87.0 76 59.2
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 6.6e-16 87.0 76 59.2
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 6.6e-16 87.0 76 55.3
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 6.6e-16 87.0 76 55.3
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 6.6e-16 87.0 76 56.6
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 6.6e-16 87.0 76 56.6
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 8.6e-16 86.7 70 65.7
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 8.6e-16 86.7 75 61.3
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 8.6e-16 86.7 76 57.9
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 1.1e-15 86.3 76 56.6
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 1.5e-15 85.9 76 57.9
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 1.5e-15 85.9 76 57.9
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 1.9e-15 85.5 73 60.3
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.9e-15 85.5 76 56.6
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.9e-15 85.5 76 56.6
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 2.5e-15 85.1 73 60.3
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 2.5e-15 85.1 76 56.6
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 2.5e-15 85.1 72 62.5
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 3.3e-15 84.7 72 56.9
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 3.3e-15 84.7 73 60.3
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 3.3e-15 84.7 70 62.9
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 3.3e-15 84.7 76 56.6
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 5.6e-15 84.0 76 55.3
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 5.6e-15 84.0 71 59.2
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 5.6e-15 84.0 76 53.9
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 7.3e-15 83.6 70 58.6
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 9.5e-15 83.2 72 59.7
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 1.2e-14 82.8 77 58.4
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 1.2e-14 82.8 77 58.4
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 1.2e-14 82.8 76 53.9
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 1.6e-14 82.4 77 57.1
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 1.6e-14 82.4 76 55.3
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 2.1e-14 82.0 68 58.8
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 2.8e-14 81.6 69 59.4
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 2.8e-14 81.6 77 57.1
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 3.6e-14 81.3 76 52.6
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 4.7e-14 80.9 60 65.0
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-13 79.7 63 61.9
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 1.4e-13 79.3 65 58.5
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 2.4e-13 78.6 60 63.3
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.4e-12 74.7 67 56.7
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.7e-09 65.1 63 52.4
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 3.0e-08 61.6 75 46.7
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 3.9e-08 61.2 58 55.2
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 3.6e-06 54.7 73 41.1


User provided reference genes

Program Settings