Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 5.9e-280 966.8 473 100.0
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 1.8e-164 583.2 514 59.1
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 3.2e-161 572.4 515 57.9
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 9.7e-158 560.8 464 61.0
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 2.4e-156 556.2 471 60.3
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 3.1e-156 555.8 464 62.1
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 5.3e-156 555.1 472 60.4
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 9.1e-156 554.3 472 59.7
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 2.0e-155 553.1 480 59.6
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 2.0e-155 553.1 487 59.3
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.3e-154 550.4 475 60.4
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 1.3e-154 550.4 471 59.9
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 5.0e-154 548.5 472 59.3
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 8.5e-154 547.7 474 59.7
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 8.5e-154 547.7 468 60.5
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 8.5e-154 547.7 473 58.8
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 1.9e-153 546.6 469 59.9
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 5.5e-153 545.0 468 60.5
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 5.5e-153 545.0 464 59.7
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 5.5e-153 545.0 481 58.2
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 7.2e-153 544.7 463 59.6
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 9.4e-153 544.3 474 60.5
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 1.2e-152 543.9 474 58.2
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 2.7e-152 542.7 467 60.4
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 4.7e-152 542.0 478 58.6
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 6.1e-152 541.6 466 59.4
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 8.0e-152 541.2 468 58.8
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 1.0e-151 540.8 466 58.8
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.4e-151 540.4 474 58.0
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 1.4e-151 540.4 471 58.4
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 5.2e-151 538.5 464 58.6
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 5.2e-151 538.5 464 58.8
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 5.2e-151 538.5 465 59.4
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 5.2e-151 538.5 474 58.0
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 5.2e-151 538.5 471 58.0
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 6.7e-151 538.1 464 59.5
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 6.7e-151 538.1 467 60.6
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 6.7e-151 538.1 466 58.2
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 6.7e-151 538.1 473 59.2
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 8.8e-151 537.7 464 58.8
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 8.8e-151 537.7 471 60.7
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 2.6e-150 536.2 463 58.5
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 2.6e-150 536.2 464 58.8
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 2.6e-150 536.2 464 58.6
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 4.4e-150 535.4 468 58.8
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 7.5e-150 534.6 470 60.0
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 9.7e-150 534.3 473 57.7
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 2.8e-149 532.7 464 57.5
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 4.8e-149 531.9 480 57.5
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 4.8e-149 531.9 471 59.2
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 6.3e-149 531.6 473 57.5
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.4e-148 530.4 476 58.0
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.4e-148 530.4 467 59.5
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 1.8e-148 530.0 497 55.7
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 3.1e-148 529.3 463 58.3
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 5.3e-148 528.5 463 58.3
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 5.3e-148 528.5 463 58.3
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 9.1e-148 527.7 462 60.8
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 1.2e-147 527.3 476 58.4
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 1.2e-147 527.3 472 57.6
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 1.6e-147 526.9 469 59.3
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 2.0e-147 526.6 463 58.1
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 4.5e-147 525.4 468 59.0
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 4.5e-147 525.4 467 58.2
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 7.7e-147 524.6 477 57.4
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.0e-146 524.2 467 58.7
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 1.0e-146 524.2 471 57.3
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 1.7e-146 523.5 473 57.7
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 2.9e-146 522.7 483 57.1
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 6.5e-146 521.5 472 58.7
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 8.5e-146 521.2 467 59.1
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 1.1e-145 520.8 474 56.5
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 1.9e-145 520.0 455 59.8
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 7.2e-145 518.1 468 58.8
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 1.2e-144 517.3 446 60.8
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 2.1e-144 516.5 467 58.5
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 3.6e-144 515.8 471 57.3
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 4.7e-144 515.4 467 58.2
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 6.1e-144 515.0 474 58.4
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 6.1e-144 515.0 472 57.6
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 8.0e-144 514.6 467 58.2
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 1.4e-143 513.8 476 56.7
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 1.4e-143 513.8 479 55.9
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 3.0e-143 512.7 473 57.1
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 8.8e-143 511.1 470 57.4
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 8.8e-143 511.1 473 57.5
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 2.0e-142 510.0 472 57.8
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 7.5e-142 508.1 471 57.1
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 3.1e-140 502.7 466 57.7
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 5.4e-140 501.9 465 55.7
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 7.0e-140 501.5 438 57.8
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 1.6e-139 500.4 440 59.8
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 4.5e-139 498.8 427 61.1
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 1.0e-138 497.7 454 56.2
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 2.9e-138 496.1 476 57.1
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 8.6e-138 494.6 550 49.8
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 9.5e-137 491.1 468 55.8
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 3.6e-136 489.2 428 57.9
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 6.1e-136 488.4 466 55.6
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 4.0e-135 485.7 429 60.6
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 1.2e-134 484.2 464 55.6
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 2.0e-134 483.4 409 59.9
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 4.4e-134 482.3 469 53.1
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 1.1e-132 477.6 544 46.5
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 1.1e-132 477.6 524 50.0
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 1.4e-132 477.2 470 55.7
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 8.6e-130 468.0 405 58.5
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 7.3e-129 464.9 467 53.3
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 1.0e-127 461.1 478 51.7
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.8e-127 460.3 465 54.6
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 2.3e-127 459.9 370 61.1
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 1.7e-125 453.8 473 52.4
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 9.2e-124 448.0 472 53.0
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 9.5e-121 438.0 466 51.9
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.6e-120 437.2 347 62.5
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 2.9e-117 426.4 360 58.1
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 8.6e-114 414.8 474 51.1
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 5.2e-111 405.6 411 52.6
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.0e-98 364.8 471 44.8
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 2.2e-93 347.1 476 43.9
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 9.3e-84 315.1 327 54.4
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 2.3e-82 310.5 382 43.5
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 7.4e-81 305.4 466 39.7
Rhsim08G0107400 Rhododendron simsii HOM05D004406 ORTHO05D005660 1.1e-79 301.6 230 65.7
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 2.7e-75 287.0 480 36.5
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 6.7e-74 282.3 303 50.5
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 1.3e-72 278.1 508 37.0
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 5.8e-70 269.2 451 39.2
SEGI_11739 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 2.9e-69 266.9 204 65.2
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 3.2e-68 263.5 273 51.6
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 1.6e-67 261.2 211 61.1
Gohir.D11G203050 Gossypium hirsutum HOM05D004406 ORTHO05D005660 2.0e-62 244.2 282 51.4
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 4.1e-47 193.4 270 44.1
CSS0001722 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.5e-44 184.1 248 45.6
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 3.0e-42 177.2 240 42.9
Zm00001eb421280 Zea mays HOM05D004406 ORTHO05D005660 6.7e-42 176.0 203 48.3
Actinidia18838 Actinidia chinensis HOM05D004406 ORTHO05D005660 4.4e-41 173.3 289 39.1
SHI18055 Sapria himalayana HOM05D004406 ORTHO05D005660 5.7e-41 172.9 195 49.7
Zm00001eb023770 Zea mays HOM05D003078 ORTHO05D003545 1.4e-39 168.3 196 49.0
Os06g0564800 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 6.5e-37 159.5 107 67.3
FAN04G0447 Fragaria x ananassa HOM05D004406 ORTHO05D005660 2.5e-36 157.5 171 51.5
AL6G51070 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 5.5e-36 156.4 180 47.8
CSS0016238 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 4.4e-33 146.7 110 60.0
CSS0034904 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 3.7e-32 143.7 110 60.0
CSS0034423 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 4.8e-32 143.3 110 58.2
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 4.8e-32 143.3 126 56.3
Zm00001eb049380 Zea mays HOM05D004406 ORTHO05D005660 4.5e-30 136.7 104 61.5
Zm00001eb180660 Zea mays HOM05D004406 ORTHO05D000467 1.2e-27 128.6 126 55.6
CSS0028761 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.7e-24 118.2 110 50.9
Actinidia18841 Actinidia chinensis HOM05D004406 ORTHO05D005660 2.2e-24 117.9 67 85.1
Zm00001eb307610 Zea mays HOM05D004406 ORTHO05D005660 9.1e-23 112.5 129 50.4
Actinidia18840 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.1e-20 105.5 199 36.7
Haze_08535 Corylus avellana HOM05D004406 ORTHO05D005660 2.8e-16 90.9 125 44.0
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 1.1e-15 89.0 108 49.1
Lj3g0015683 Lotus japonicus HOM05D004406 ORTHO05D036510 4.7e-11 73.6 61 59.0
vmacro12020 Vaccinium macrocarpon HOM05D004406 ORTHO05D036510 2.7e-06 57.8 32 84.4
vmacro15157 Vaccinium macrocarpon HOM05D004406 ORTHO05D036510 6.0e-06 56.6 32 81.2


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