Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0154 Selaginella moellendorffii HOM05D003313 ORTHO05D004217 8.1e-67 256.9 127 100.0
SMO116G0300 Selaginella moellendorffii HOM05D003313 ORTHO05D004217 8.7e-53 210.3 127 85.0
PSO541G4460 Papaver somniferum HOM05D003313 ORTHO05D004217 2.6e-33 145.6 126 60.3
PSO675G1011 Papaver somniferum HOM05D003313 ORTHO05D004217 2.6e-33 145.6 126 60.3
Aqoxy1G01346 Aquilegia oxysepala HOM05D003313 ORTHO05D004217 4.5e-33 144.8 125 58.4
CiPaw.01G000300 Carya illinoinensis HOM05D003313 ORTHO05D004217 4.5e-33 144.8 127 59.8
Nn3g20244 Nelumbo nucifera HOM05D003313 ORTHO05D004217 5.8e-33 144.4 126 58.7
Dinv30970 Davidia involucrata HOM05D003313 ORTHO05D004217 7.6e-33 144.1 126 58.7
Sed0021054 Sechium edule HOM05D003313 ORTHO05D004217 9.9e-33 143.7 126 58.7
Hma1.2p1_0052F.1_g030180 Hydrangea macrophylla HOM05D003313 ORTHO05D004217 1.3e-32 143.3 126 57.9
TAR624G0023 Trochodendron aralioides HOM05D003313 ORTHO05D004217 1.7e-32 142.9 126 57.9
TAR624G1107 Trochodendron aralioides HOM05D003313 ORTHO05D004217 1.7e-32 142.9 126 57.9
ClCG09G008380 Citrullus lanatus HOM05D003313 ORTHO05D004217 2.2e-32 142.5 126 57.9
MELO3C021123.2 Cucumis melo HOM05D003313 ORTHO05D004217 2.2e-32 142.5 126 57.9
CsaV3_7G026710 Cucumis sativus L. HOM05D003313 ORTHO05D004217 2.2e-32 142.5 126 57.9
Eucgr.B01361 Eucalyptus grandis HOM05D003313 ORTHO05D004217 2.2e-32 142.5 126 57.1
Cfa004406 Carpinus fangiana HOM05D003313 ORTHO05D004217 2.9e-32 142.1 126 57.9
AagrBONN_evm.TU.Sc2ySwM_228.3123 Anthoceros agrestis HOM05D003313 ORTHO05D004217 4.9e-32 141.4 127 56.7
Duzib150G0949 Durio zibethinus HOM05D003313 ORTHO05D004217 6.4e-32 141.0 126 57.1
QL11p018449 Quercus lobata HOM05D003313 ORTHO05D004217 6.4e-32 141.0 126 57.9
Sc10g0005440 Simmondsia chinensis HOM05D003313 ORTHO05D004217 6.4e-32 141.0 126 57.1
ATR0620G123 Amborella trichopoda HOM05D003313 ORTHO05D004217 1.1e-31 140.2 126 57.1
CSS0008361 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.4e-31 139.8 126 56.3
CSS0011425 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.4e-31 139.8 126 56.3
FvH4_2g17560 Fragaria vesca HOM05D003313 ORTHO05D004217 1.9e-31 139.4 127 57.5
FAN24G1237 Fragaria x ananassa HOM05D003313 ORTHO05D004217 1.9e-31 139.4 127 57.5
FAN27G0740 Fragaria x ananassa HOM05D003313 ORTHO05D004217 1.9e-31 139.4 127 57.5
SalBow4G0229 Salvia bowleyana HOM05D003313 ORTHO05D004217 1.9e-31 139.4 126 57.1
SalBow4G1329 Salvia bowleyana HOM05D003313 ORTHO05D004217 1.9e-31 139.4 126 57.1
GSVIVG01029823001 Vitis vinifera HOM05D003313 ORTHO05D004217 1.9e-31 139.4 126 57.1
Atru.chr3.2031 Acer truncatum HOM05D003313 ORTHO05D004217 3.2e-31 138.7 127 56.7
Lj9C240T5 Lonicera japonica HOM05D003313 ORTHO05D004217 3.2e-31 138.7 126 56.3
CSS0016348 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 4.2e-31 138.3 126 56.3
Cc02_g36830 Coffea canephora HOM05D003313 ORTHO05D004217 4.2e-31 138.3 126 55.6
Gohir.A08G082000 Gossypium hirsutum HOM05D003313 ORTHO05D004217 4.2e-31 138.3 126 55.6
Gohir.D08G091400 Gossypium hirsutum HOM05D003313 ORTHO05D004217 4.2e-31 138.3 126 55.6
Gorai.004G096900 Gossypium raimondii HOM05D003313 ORTHO05D004217 4.2e-31 138.3 126 55.6
EL10Ac3g07331 Beta vulgaris HOM05D003313 ORTHO05D004217 5.5e-31 137.9 126 55.6
AUR62018429 Chenopodium quinoa HOM05D003313 ORTHO05D004217 5.5e-31 137.9 126 55.6
AUR62021005 Chenopodium quinoa HOM05D003313 ORTHO05D004217 5.5e-31 137.9 126 55.6
FAN15G1274 Fragaria x ananassa HOM05D003313 ORTHO05D004217 5.5e-31 137.9 127 56.7
RcHm_v2.0_Chr6g0282501 Rosa chinensis HOM05D003313 ORTHO05D004217 5.5e-31 137.9 127 56.7
Migut.B00692 Erythranthe guttata HOM05D003313 ORTHO05D004217 7.1e-31 137.5 127 55.1
Thecc.09G202800 Theobroma cacao HOM05D003313 ORTHO05D004217 7.1e-31 137.5 126 55.6
AL6G36310 Arabidopsis lyrata HOM05D003313 ORTHO05D004217 9.3e-31 137.1 126 55.6
AT5G24710 Arabidopsis thaliana HOM05D003313 ORTHO05D004217 9.3e-31 137.1 126 55.6
Carub.0006s2256 Capsella rubella HOM05D003313 ORTHO05D004217 9.3e-31 137.1 126 54.8
CARHR188770 Cardamine hirsuta HOM05D003313 ORTHO05D004217 9.3e-31 137.1 126 55.6
CSS0044155 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.2e-30 136.7 126 55.6
Thhalv10003520m.g Eutrema salsugineum HOM05D003313 ORTHO05D004217 1.2e-30 136.7 126 55.6
Oeu016865.1 Olea europaea HOM05D003313 ORTHO05D004217 1.6e-30 136.3 126 55.6
CANSAT01G1610 Cannabis sativa HOM05D003313 ORTHO05D004217 2.1e-30 136.0 125 56.8
Hund24556 Selenicereus undatus HOM05D003313 ORTHO05D004217 2.1e-30 136.0 126 55.6
Manes.11G105500 Manihot esculenta HOM05D003313 ORTHO05D004217 2.7e-30 135.6 126 54.8
Ah.13g077320 Amaranthus hybridus HOM05D003313 ORTHO05D004217 3.5e-30 135.2 126 54.8
TWI38G1822 Tripterygium wilfordii HOM05D003313 ORTHO05D004217 3.5e-30 135.2 126 54.8
Potri.006G081800 Populus trichocarpa HOM05D003313 ORTHO05D004217 4.6e-30 134.8 127 55.9
BcaNung01252 Brassica carinata HOM05D003313 ORTHO05D004217 6.0e-30 134.4 126 54.0
Lj5C312G5 Lonicera japonica HOM05D003313 ORTHO05D004217 6.0e-30 134.4 127 55.9
SEGI_06427 Sequoiadendron giganteum HOM05D003313 ORTHO05D004217 6.0e-30 134.4 126 51.6
THA.LOC104814960 Tarenaya hassleriana HOM05D003313 ORTHO05D004217 6.0e-30 134.4 126 54.0
HPP92_021469 Vanilla planifolia HOM05D003313 ORTHO05D004217 6.0e-30 134.4 126 54.8
Aa31LG11G3950 Aethionema arabicum HOM05D003313 ORTHO05D004217 7.9e-30 134.0 126 54.8
CDE09G1422 Ceratophyllum demersum HOM05D003313 ORTHO05D004217 7.9e-30 134.0 126 54.8
A06p35540 Brassica napus HOM05D003313 ORTHO05D004217 1.0e-29 133.7 126 54.0
C07p43000 Brassica napus HOM05D003313 ORTHO05D004217 1.0e-29 133.7 126 54.0
BolC7t44829H Brassica oleracea HOM05D003313 ORTHO05D004217 1.0e-29 133.7 126 54.0
BraA06t26479Z Brassica rapa HOM05D003313 ORTHO05D004217 1.0e-29 133.7 126 54.0
Prupe.8G187800 Prunus persica HOM05D003313 ORTHO05D004217 1.0e-29 133.7 126 54.8
MSTRG.27897 Avicennia marina HOM05D003313 ORTHO05D004217 1.3e-29 133.3 124 56.5
CBR_g3034 Chara braunii HOM05D003313 ORTHO05D004217 1.8e-29 132.9 124 52.4
VMungo1383G1216 Vigna mungo HOM05D003313 ORTHO05D004217 1.8e-29 132.9 124 53.2
Phvul.001G220300 Phaseolus vulgaris HOM05D003313 ORTHO05D004217 2.3e-29 132.5 124 53.2
Sp2g22700 Schrenkiella parvula HOM05D003313 ORTHO05D004217 2.3e-29 132.5 126 53.2
ECA240G0535 Erigeron canadensis HOM05D003313 ORTHO05D004217 3.9e-29 131.7 126 52.4
Glyma.03G226400 Glycine max HOM05D003313 ORTHO05D004217 3.9e-29 131.7 124 54.0
MD05G1154700 Malus domestica HOM05D003313 ORTHO05D004217 3.9e-29 131.7 126 54.0
HanXRQChr15g0468281 Helianthus annuus HOM05D003313 ORTHO05D004217 5.1e-29 131.3 126 54.8
Sabra06G0061800 Salix brachista HOM05D003313 ORTHO05D004217 6.7e-29 131.0 127 56.7
BcaC04g23548 Brassica carinata HOM05D003313 ORTHO05D004217 8.7e-29 130.6 126 52.4
A09p06410 Brassica napus HOM05D003313 ORTHO05D004217 8.7e-29 130.6 126 52.4
C09p07140 Brassica napus HOM05D003313 ORTHO05D004217 8.7e-29 130.6 126 52.4
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 8.7e-29 130.6 126 52.4
BraA09t36285Z Brassica rapa HOM05D003313 ORTHO05D004217 8.7e-29 130.6 126 52.4
BcaNung07352 Brassica carinata HOM05D003313 ORTHO05D004217 1.1e-28 130.2 126 52.4
Glyma.19G223400 Glycine max HOM05D003313 ORTHO05D004217 1.1e-28 130.2 124 53.2
Solyc01g102510.4 Solanum lycopersicum HOM05D003313 ORTHO05D004217 1.5e-28 129.8 126 50.8
Sopen01g044950 Solanum pennellii HOM05D003313 ORTHO05D004217 1.5e-28 129.8 126 50.8
PGSC0003DMG400018227 Solanum tuberosum HOM05D003313 ORTHO05D004217 1.5e-28 129.8 126 50.8
Lj1g0026129 Lotus japonicus HOM05D003313 ORTHO05D004217 1.9e-28 129.4 124 51.6
Mapoly0031s0124 Marchantia polymorpha HOM05D003313 ORTHO05D004217 2.5e-28 129.0 130 50.0
Os01g0653800 Oryza sativa ssp. japonica HOM05D003313 ORTHO05D004217 2.5e-28 129.0 127 51.2
Hund19080 Selenicereus undatus HOM05D003313 ORTHO05D004217 2.5e-28 129.0 126 51.6
Gohir.D08G026350 Gossypium hirsutum HOM05D003313 ORTHO05D004217 5.6e-28 127.9 124 51.6
Gorai.004G022800 Gossypium raimondii HOM05D003313 ORTHO05D004217 5.6e-28 127.9 124 51.6
Lalb_Chr15g0077831 Lupinus albus HOM05D003313 ORTHO05D004217 5.6e-28 127.9 124 51.6
Ca_09260_v3 Cicer arietinum L. HOM05D003313 ORTHO05D004217 7.4e-28 127.5 124 51.6
Medtr7g111080 Medicago truncatula HOM05D003313 ORTHO05D004217 7.4e-28 127.5 124 51.6
Zm00001eb158110 Zea mays HOM05D003313 ORTHO05D004217 7.4e-28 127.5 127 48.8
Zm00001eb359400 Zea mays HOM05D003313 ORTHO05D004217 7.4e-28 127.5 127 49.6
MBI07_g10943_MAGBIO Magnolia biondii HOM05D003313 ORTHO05D004217 1.3e-27 126.7 152 48.0
Psat3g015640 Pisum sativum HOM05D003313 ORTHO05D004217 1.3e-27 126.7 124 51.6
TPR.G8375 Trifolium pratense HOM05D003313 ORTHO05D004217 1.3e-27 126.7 124 51.6
Lsat_1_v5_gn_7_68120 Lactuca sativa HOM05D003313 ORTHO05D004217 1.6e-27 126.3 126 53.2
Peaxi162Scf00071g00133 Petunia axillaris HOM05D003313 ORTHO05D004217 1.6e-27 126.3 134 50.0
Pp3c1_36370 Physcomitrium patens HOM05D003313 ORTHO05D004217 1.6e-27 126.3 125 52.0
Lalb_Chr18g0046271 Lupinus albus HOM05D003313 ORTHO05D004217 3.7e-27 125.2 124 50.8
Nitab4.5_0004090g0090 Nicotiana tabacum HOM05D003313 ORTHO05D004217 6.2e-27 124.4 131 48.9
DCAR_029311 Daucus carota HOM05D003313 ORTHO05D004217 3.1e-26 122.1 138 49.3
DCAR_032259 Daucus carota HOM05D003313 ORTHO05D004217 3.1e-26 122.1 138 49.3
CAN.G1379.33 Capsicum annuum HOM05D003313 ORTHO05D004217 5.3e-26 121.3 136 47.1
Ciclev10018511m.g Citrus clementina HOM05D003313 ORTHO05D004217 2.1e-22 109.4 164 40.2
Peaxi162Scf00194g00629 Petunia axillaris HOM05D003313 ORTHO05D004217 5.1e-21 104.8 135 45.2
arahy.Tifrunner.gnm1.ann1.9JB77L Arachis hypogaea HOM05D003313 ORTHO05D004217 5.3e-18 94.7 76 56.6
arahy.Tifrunner.gnm1.ann1.XWZQ7T Arachis hypogaea HOM05D003313 ORTHO05D004217 5.3e-18 94.7 76 56.6
SGA_v2.0_scaffold311G48230 Striga asiatica HOM05D003313 ORTHO05D004217 3.4e-17 92.0 104 51.0
vmacro01643 Vaccinium macrocarpon HOM05D003313 ORTHO05D004217 9.4e-15 84.0 60 58.3
Cpa.g.sc17.18 Carica papaya HOM05D003313 ORTHO05D004217 1.6e-14 83.2 58 60.3
Haze_14997 Corylus avellana HOM05D003313 ORTHO05D004217 2.1e-14 82.8 68 52.9
Rhsim11G0111700 Rhododendron simsii HOM05D003313 ORTHO05D004217 3.6e-14 82.0 60 56.7
Actinidia11708 Actinidia chinensis HOM05D003313 ORTHO05D004217 6.1e-14 81.3 58 58.6
Glyma.20G050100 Glycine max HOM05D003313 ORTHO05D004217 1.9e-12 76.3 59 57.6
Gohir.A08G023424 Gossypium hirsutum HOM05D003313 ORTHO05D004217 2.5e-12 75.9 58 55.2
MD10G1148900 Malus domestica HOM05D003313 ORTHO05D004217 3.3e-12 75.5 59 54.2
unitig_699.g19829 Utricularia gibba HOM05D003313 ORTHO05D004217 1.3e-11 73.6 50 62.0
SHI06533 Sapria himalayana HOM05D003313 ORTHO05D004217 3.7e-11 72.0 59 50.8
Glyma.18G148901 Glycine max HOM05D003313 ORTHO05D004217 6.3e-11 71.2 58 53.4
FAN27G0645 Fragaria x ananassa HOM05D003313 ORTHO05D004217 1.1e-10 70.5 53 54.7
QL09p014688 Quercus lobata HOM05D000257 ORTHO05D009129 1.8e-10 69.7 48 58.3
Nitab4.5_0000399g0070 Nicotiana tabacum HOM05D003313 ORTHO05D004217 2.6e-09 65.9 126 33.3
Nitab4.5_0011890g0010 Nicotiana tabacum HOM05D003313 ORTHO05D004217 4.5e-09 65.1 126 35.7
Nitab4.5_0005421g0020 Nicotiana tabacum HOM05D003313 ORTHO05D004217 1.3e-08 63.5 126 36.5
Cpa.g.sc17.19 Carica papaya HOM05D003313 ORTHO05D004217 1.7e-08 63.2 67 53.7
Nitab4.5_0004668g0010 Nicotiana tabacum HOM05D003313 ORTHO05D004217 2.2e-08 62.8 67 52.2
vmacro01642 Vaccinium macrocarpon HOM05D003313 ORTHO05D004217 1.4e-07 60.1 65 52.3
SHI06534 Sapria himalayana HOM05D003313 ORTHO05D004217 3.6e-06 55.5 72 48.6


User provided reference genes

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