Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 7.3e-88 327.4 190 100.0
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.0e-81 307.0 232 81.9
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 3.0e-25 119.4 127 55.1
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 3.1e-22 109.4 123 55.3
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 3.2e-19 99.4 188 45.2
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 5.1e-17 92.0 116 55.2
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 2.5e-16 89.7 116 54.3
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.3e-16 89.0 116 50.9
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.2e-15 86.7 136 48.5
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 2.2e-15 86.7 139 46.0
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 2.8e-15 86.3 95 60.0
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 2.8e-15 86.3 135 52.6
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 3.7e-15 85.9 129 46.5
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 4.8e-15 85.5 156 42.3
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 6.3e-15 85.1 112 50.9
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 8.2e-15 84.7 125 51.2
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.4e-14 83.2 125 50.4
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 4.1e-14 82.4 116 50.9
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 4.1e-14 82.4 110 55.5
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 4.1e-14 82.4 129 48.1
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 4.1e-14 82.4 129 50.4
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 5.3e-14 82.0 151 48.3
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 6.9e-14 81.6 115 52.2
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.2e-13 80.9 95 60.0
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 2.0e-13 80.1 116 51.7
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.0e-13 80.1 110 51.8
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.0e-13 80.1 124 49.2
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 2.6e-13 79.7 116 50.9
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 2.6e-13 79.7 116 50.0
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.6e-13 79.7 94 59.6
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 2.6e-13 79.7 96 58.3
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 2.6e-13 79.7 83 62.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.4e-13 79.3 160 48.8
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 3.4e-13 79.3 181 41.4
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 4.5e-13 79.0 103 56.3
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.5e-13 79.0 121 47.9
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 4.5e-13 79.0 111 55.0
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 7.7e-13 78.2 87 65.5
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.0e-12 77.8 96 63.5
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.0e-12 77.8 96 63.5
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.0e-12 77.8 96 62.5
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.3e-12 77.4 96 61.5
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.7e-12 77.0 96 61.5
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.7e-12 77.0 110 58.2
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.7e-12 77.0 129 49.6
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.7e-12 77.0 96 57.3
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 1.7e-12 77.0 134 47.0
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.2e-12 76.6 122 49.2
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 2.2e-12 76.6 100 55.0
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.2e-12 76.6 96 60.4
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 2.2e-12 76.6 147 49.7
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 2.2e-12 76.6 84 67.9
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.9e-12 76.3 92 58.7
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 3.8e-12 75.9 91 58.2
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 3.8e-12 75.9 82 65.9
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 3.8e-12 75.9 117 53.8
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 5.0e-12 75.5 153 43.8
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 5.0e-12 75.5 89 59.6
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 5.0e-12 75.5 122 51.6
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 5.0e-12 75.5 85 70.6
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 5.0e-12 75.5 85 70.6
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 5.0e-12 75.5 85 70.6
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 6.5e-12 75.1 85 70.6
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 8.5e-12 74.7 116 50.0
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.1e-11 74.3 120 50.0
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.1e-11 74.3 100 54.0
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.1e-11 74.3 146 41.8
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.4e-11 73.9 88 60.2
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.4e-11 73.9 88 60.2
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.4e-11 73.9 88 60.2
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.4e-11 73.9 88 60.2
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.4e-11 73.9 82 63.4
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.4e-11 73.9 95 56.8
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.9e-11 73.6 91 57.1
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.9e-11 73.6 88 60.2
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 1.9e-11 73.6 78 66.7
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.9e-11 73.6 78 65.4
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 2.5e-11 73.2 96 60.4
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 3.2e-11 72.8 78 67.9
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 3.2e-11 72.8 87 62.1
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 3.2e-11 72.8 110 55.5
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 3.2e-11 72.8 91 61.5
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 4.2e-11 72.4 113 55.8
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.2e-11 72.4 100 53.0
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 4.2e-11 72.4 88 59.1
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 5.5e-11 72.0 113 54.9
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 5.5e-11 72.0 83 62.7
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 5.5e-11 72.0 111 55.0
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 5.5e-11 72.0 71 70.4
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 5.5e-11 72.0 73 69.9
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 7.2e-11 71.6 85 69.4
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 2.1e-10 70.1 82 64.6
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 3.6e-10 69.3 95 53.7
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 4.7e-10 68.9 110 50.0
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 6.1e-10 68.6 78 73.1
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 1.0e-09 67.8 74 68.9
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.3e-09 66.6 131 45.0
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.1e-08 64.3 101 55.4
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 2.0e-08 63.5 78 64.1
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 3.3e-08 62.8 78 64.1
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 4.4e-08 62.4 78 62.8
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 4.8e-07 58.9 116 44.0


User provided reference genes

Program Settings