Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0115 Selaginella moellendorffii HOM05D001623 ORTHO05D001473 3.3e-70 268.1 121 100.0
SMO367G1173 Selaginella moellendorffii HOM05D001623 ORTHO05D001473 5.5e-57 224.2 119 82.4
SMO147G0143 Selaginella moellendorffii HOM05D001623 ORTHO05D001473 1.5e-25 119.8 119 47.9
SMO147G0230 Selaginella moellendorffii HOM05D001623 ORTHO05D001473 8.0e-24 114.0 93 51.6
SMO147G0051 Selaginella moellendorffii HOM05D001623 ORTHO05D001473 2.3e-23 112.5 93 50.5
SMO147G0399 Selaginella moellendorffii HOM05D001623 ORTHO05D001473 8.3e-21 104.0 126 41.3
SMO367G0597 Selaginella moellendorffii HOM05D001623 ORTHO05D001473 6.2e-16 87.8 124 34.7
EL10Ac5g10536 Beta vulgaris HOM05D001623 ORTHO05D001473 1.1e-12 77.0 129 28.7
AUR62028594 Chenopodium quinoa HOM05D001623 ORTHO05D001473 1.1e-12 77.0 120 34.2
Sc16g0007210 Simmondsia chinensis HOM05D001623 ORTHO05D001473 1.4e-12 76.6 122 35.2
Sc16g0007280 Simmondsia chinensis HOM05D001623 ORTHO05D001473 2.4e-12 75.9 122 33.6
Mapoly0036s0049 Marchantia polymorpha HOM05D001623 ORTHO05D001473 4.1e-12 75.1 113 33.6
Sc16g0007220 Simmondsia chinensis HOM05D001623 ORTHO05D001473 4.1e-12 75.1 122 34.4
Mapoly0117s0046 Marchantia polymorpha HOM05D001623 ORTHO05D001473 7.1e-12 74.3 119 33.6
Hma1.2p1_0049F.1_g028180 Hydrangea macrophylla HOM05D001623 ORTHO05D001473 9.2e-12 73.9 121 33.9
Pp3c12_11710 Physcomitrium patens HOM05D009332 ORTHO05D001473 2.1e-11 72.8 108 34.3
Mapoly0144s0007 Marchantia polymorpha HOM05D001623 ORTHO05D001473 2.7e-11 72.4 108 31.5
BcaB01g03396 Brassica carinata HOM05D001623 ORTHO05D001473 3.5e-11 72.0 119 32.8
Sc16g0010980 Simmondsia chinensis HOM05D001623 ORTHO05D001473 4.6e-11 71.6 128 31.2
BcaB06g27806 Brassica carinata HOM05D001623 ORTHO05D001473 7.8e-11 70.9 119 34.5
Mapoly0036s0052 Marchantia polymorpha HOM05D001623 ORTHO05D001473 7.8e-11 70.9 112 30.4
Mapoly0134s0047 Marchantia polymorpha HOM05D001623 ORTHO05D001473 7.8e-11 70.9 122 32.8
BcaC02g08687 Brassica carinata HOM05D001623 ORTHO05D001473 1.0e-10 70.5 119 33.6
Sc16g0007240 Simmondsia chinensis HOM05D001623 ORTHO05D001473 1.0e-10 70.5 122 32.0
SGA_v2.0_scaffold2G01227 Striga asiatica HOM05D001623 ORTHO05D001473 1.0e-10 70.5 118 31.4
Pp3c4_4730 Physcomitrium patens HOM05D001623 ORTHO05D001473 1.3e-10 70.1 108 31.5
Sc16g0010970 Simmondsia chinensis HOM05D001623 ORTHO05D001473 1.3e-10 70.1 126 34.1
Peaxi162Scf00951g00331 Petunia axillaris HOM05D001623 ORTHO05D001473 1.7e-10 69.7 116 32.8
Sc16g0007260 Simmondsia chinensis HOM05D001623 ORTHO05D001473 1.7e-10 69.7 122 33.6
A04p16650 Brassica napus HOM05D001623 ORTHO05D001473 3.0e-10 68.9 124 34.7
CARHR000100 Cardamine hirsuta HOM05D001623 ORTHO05D001473 3.9e-10 68.6 119 31.9
BcaC02g08735 Brassica carinata HOM05D001623 ORTHO05D001473 1.1e-09 67.0 119 32.8
Os10g0361900 Oryza sativa ssp. japonica HOM05D001623 ORTHO05D001473 1.5e-09 66.6 119 30.3
PSO781G0095 Papaver somniferum HOM05D001623 ORTHO05D001473 2.5e-09 65.9 131 29.0
Migut.F00499 Erythranthe guttata HOM05D001623 ORTHO05D001473 3.3e-09 65.5 118 30.5
Aqoxy2G00318 Aquilegia oxysepala HOM05D001623 ORTHO05D001473 4.3e-09 65.1 119 30.3
Os10g0361300 Oryza sativa ssp. japonica HOM05D001623 ORTHO05D001473 7.3e-09 64.3 119 29.4
Gohir.A12G197500 Gossypium hirsutum HOM05D001623 ORTHO05D001473 9.5e-09 63.9 123 30.1
Phvul.001G251400 Phaseolus vulgaris HOM05D001623 ORTHO05D001473 9.5e-09 63.9 119 30.3
Prupe.2G275000 Prunus persica HOM05D001623 ORTHO05D001473 9.5e-09 63.9 118 31.4
Mapoly0036s0051 Marchantia polymorpha HOM05D001623 ORTHO05D001473 1.2e-08 63.5 119 26.9
Zm00001eb194190 Zea mays HOM05D001623 ORTHO05D001473 1.2e-08 63.5 119 29.4
AT4G39730 Arabidopsis thaliana HOM05D001623 ORTHO05D001473 1.6e-08 63.2 119 30.3
Actinidia13590 Actinidia chinensis HOM05D001623 ORTHO05D001473 2.1e-08 62.8 118 28.8
BcaB04g17429 Brassica carinata HOM05D001623 ORTHO05D001473 2.8e-08 62.4 116 30.2
BcaC07g41011 Brassica carinata HOM05D001623 ORTHO05D001473 3.6e-08 62.0 119 31.1
Os04g0456200 Oryza sativa ssp. japonica HOM05D001623 ORTHO05D001473 8.1e-08 60.8 119 29.4
HPP92_004294 Vanilla planifolia HOM05D001623 ORTHO05D001473 8.1e-08 60.8 132 29.5
HPP92_004296 Vanilla planifolia HOM05D001623 ORTHO05D001473 8.1e-08 60.8 132 29.5
BraA04t17299Z Brassica rapa HOM05D001623 ORTHO05D001473 1.1e-07 60.5 101 33.7
Cre03.g178100 Chlamydomonas reinhardtii HOM05D009332 ORTHO05D011893 1.4e-07 60.1 91 33.0
Sc16g0007270 Simmondsia chinensis HOM05D001623 ORTHO05D001473 1.8e-07 59.7 93 35.5
Os02g0753300 Oryza sativa ssp. japonica HOM05D001623 ORTHO05D001473 3.1e-07 58.9 119 30.3
Hund21785 Selenicereus undatus HOM05D001623 ORTHO05D001473 3.1e-07 58.9 136 29.4
Thhalv10000329m.g Eutrema salsugineum HOM05D001623 ORTHO05D001473 5.2e-07 58.2 119 27.7
MCO05G464 Micromonas commoda HOM05D009332 ORTHO05D011893 6.8e-07 57.8 107 29.0
unitig_32.g10695 Utricularia gibba HOM05D001623 ORTHO05D001473 6.8e-07 57.8 119 28.6
SEGI_17058 Sequoiadendron giganteum HOM05D001120 ORTHO05D002447 8.9e-07 57.4 118 28.0
Nn6g33885 Nelumbo nucifera HOM05D001623 ORTHO05D001473 1.2e-06 57.0 121 29.8
SalBow3G0588 Salvia bowleyana HOM05D001623 ORTHO05D001473 1.2e-06 57.0 116 32.8
SMO202G0068 Selaginella moellendorffii HOM05D016177 ORTHO05D019598 4.4e-06 55.1 111 27.0
CDE06G2009 Ceratophyllum demersum HOM05D001120 ORTHO05D002447 5.8e-06 54.7 121 31.4


User provided reference genes

Program Settings