Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO352G0060 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 5.6e-89 330.9 161 100.0
SMO288G0006 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 5.8e-70 267.7 168 83.3
SMO352G0064 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 2.3e-66 255.8 165 82.4
SMO352G0004 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.5e-65 253.1 126 98.4
SMO360G0006 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.9e-65 252.7 165 81.8
SMO243G0003 Selaginella moellendorffii HOM05D015637 ORTHO05D003442 5.6e-65 251.1 125 98.4
SMO360G0004 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 5.6e-65 251.1 128 96.9
SMO111G0083 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.6e-64 249.6 131 93.1
SMO288G0002 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 8.1e-64 247.3 128 95.3
SMO352G0048 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 8.1e-64 247.3 125 96.8
SMO360G0009 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.1e-63 246.9 132 93.9
SMO360G0029 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.1e-63 246.9 125 97.6
SMO360G0005 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.4e-63 246.5 125 96.0
SMO360G0001 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 6.9e-63 244.2 128 93.8
SMO104G0006 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.3e-50 203.4 128 82.8
SMO297G0029 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.3e-40 170.2 115 78.3
SMO356G0493 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 5.3e-23 111.7 107 47.7
AagrBONN_evm.TU.Sc2ySwM_362.1054 Anthoceros agrestis HOM05D001890 ORTHO05D003442 1.4e-18 97.1 116 36.2
Pp3c9_24430 Physcomitrium patens HOM05D001890 ORTHO05D003442 1.5e-17 93.6 111 39.6
Sed0014759 Sechium edule HOM05D001890 ORTHO05D003442 9.7e-17 90.9 113 38.9
PSO384G4065 Papaver somniferum HOM05D001890 ORTHO05D003442 1.3e-16 90.5 139 38.1
ClCG10G018130 Citrullus lanatus HOM05D001890 ORTHO05D003442 1.7e-16 90.1 108 39.8
Pp3c15_23860 Physcomitrium patens HOM05D001890 ORTHO05D003442 2.2e-16 89.7 104 38.5
MELO3C009560.2 Cucumis melo HOM05D001890 ORTHO05D003442 2.8e-16 89.4 112 37.5
Sed0025654 Sechium edule HOM05D001890 ORTHO05D003442 3.7e-16 89.0 98 42.9
CsaV3_3G038170 Cucumis sativus L. HOM05D001890 ORTHO05D003442 4.8e-16 88.6 112 37.5
HanXRQChr13g0398661 Helianthus annuus HOM05D001890 ORTHO05D003442 8.2e-16 87.8 127 37.8
Mapoly0007s0117 Marchantia polymorpha HOM05D001890 ORTHO05D003442 8.2e-16 87.8 115 39.1
Phvul.007G266400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 8.2e-16 87.8 100 43.0
Potri.016G067000 Populus trichocarpa HOM05D001890 ORTHO05D003442 1.1e-15 87.4 100 41.0
Medtr7g106640 Medicago truncatula HOM05D001890 ORTHO05D003442 1.4e-15 87.0 80 50.0
Sabra16G0068300 Salix brachista HOM05D001890 ORTHO05D003442 1.8e-15 86.7 100 41.0
PGSC0003DMG400021336 Solanum tuberosum HOM05D001890 ORTHO05D003442 1.8e-15 86.7 106 41.5
Atru.chr8.1302 Acer truncatum HOM05D001890 ORTHO05D003442 2.4e-15 86.3 121 37.2
Aqoxy1G00604 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 2.4e-15 86.3 109 36.7
Glyma.02G193200 Glycine max HOM05D001890 ORTHO05D003442 2.4e-15 86.3 78 50.0
Eucgr.A02559 Eucalyptus grandis HOM05D001890 ORTHO05D003442 4.1e-15 85.5 101 42.6
Gohir.D01G122600 Gossypium hirsutum HOM05D001890 ORTHO05D003442 4.1e-15 85.5 81 48.1
Gorai.002G153500 Gossypium raimondii HOM05D001890 ORTHO05D003442 4.1e-15 85.5 81 48.1
Manes.08G036000 Manihot esculenta HOM05D001890 ORTHO05D003442 5.3e-15 85.1 106 38.7
arahy.Tifrunner.gnm1.ann1.M3JRXW Arachis hypogaea HOM05D001890 ORTHO05D003442 6.9e-15 84.7 110 39.1
CDE04G0663 Ceratophyllum demersum HOM05D001890 ORTHO05D003442 6.9e-15 84.7 92 44.6
AUR62030696 Chenopodium quinoa HOM05D001890 ORTHO05D003442 6.9e-15 84.7 112 40.2
Duzib093G1618 Durio zibethinus HOM05D001890 ORTHO05D003442 6.9e-15 84.7 95 44.2
Glyma.10G083700 Glycine max HOM05D001890 ORTHO05D003442 6.9e-15 84.7 81 48.1
Gohir.A09G132700 Gossypium hirsutum HOM05D001890 ORTHO05D003442 9.1e-15 84.3 84 45.2
Gorai.006G147700 Gossypium raimondii HOM05D001890 ORTHO05D003442 9.1e-15 84.3 84 45.2
SalBow5G5266 Salvia bowleyana HOM05D001890 ORTHO05D003442 1.2e-14 84.0 115 41.7
Migut.J00744 Erythranthe guttata HOM05D001890 ORTHO05D003442 1.5e-14 83.6 106 41.5
Thecc.05G108400 Theobroma cacao HOM05D001890 ORTHO05D003442 1.5e-14 83.6 100 42.0
Ca_09069_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 2.0e-14 83.2 112 39.3
ECA233G4742 Erigeron canadensis HOM05D001890 ORTHO05D003442 2.0e-14 83.2 119 40.3
Lalb_Chr01g0017781 Lupinus albus HOM05D001890 ORTHO05D003442 2.0e-14 83.2 102 42.2
Os11g0568700 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D003442 2.0e-14 83.2 114 36.0
Sopen01g002860 Solanum pennellii HOM05D001890 ORTHO05D003442 2.0e-14 83.2 120 37.5
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 2.6e-14 82.8 145 34.5
CiPaw.10G019600 Carya illinoinensis HOM05D001890 ORTHO05D003442 2.6e-14 82.8 101 41.6
Duzib128G1367 Durio zibethinus HOM05D001890 ORTHO05D003442 2.6e-14 82.8 81 45.7
Gohir.A01G135400 Gossypium hirsutum HOM05D001890 ORTHO05D003442 2.6e-14 82.8 81 46.9
Gohir.D09G129000 Gossypium hirsutum HOM05D001890 ORTHO05D003442 2.6e-14 82.8 84 44.0
Oeu020167.1 Olea europaea HOM05D001890 ORTHO05D003442 2.6e-14 82.8 106 40.6
Ciclev10011250m.g Citrus clementina HOM05D001890 ORTHO05D003442 3.4e-14 82.4 116 35.3
Haze_20107 Corylus avellana HOM05D001890 ORTHO05D003442 3.4e-14 82.4 98 42.9
Manes.09G043100 Manihot esculenta HOM05D001890 ORTHO05D003442 3.4e-14 82.4 113 38.1
Cc01_g03030 Coffea canephora HOM05D001890 ORTHO05D003442 4.5e-14 82.0 96 42.7
COL.COLO4_29518 Corchorus olitorius HOM05D001890 ORTHO05D003442 4.5e-14 82.0 100 40.0
Hma1.2p1_0969F.1_g242598 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 4.5e-14 82.0 106 42.5
Hma1.2p1_2851F.1_g329440 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 4.5e-14 82.0 106 42.5
Solyc01g006870.4 Solanum lycopersicum HOM05D001890 ORTHO05D003442 4.5e-14 82.0 106 39.6
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 4.5e-14 82.0 102 41.2
VMungo0720G1360 Vigna mungo HOM05D001890 ORTHO05D003442 4.5e-14 82.0 79 46.8
Ca_11670_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 5.9e-14 81.6 107 38.3
Nitab4.5_0005218g0020 Nicotiana tabacum HOM05D001890 ORTHO05D003442 5.9e-14 81.6 101 41.6
Psat1g223320 Pisum sativum HOM05D001890 ORTHO05D003442 5.9e-14 81.6 113 38.9
Psat6g097960 Pisum sativum HOM05D001890 ORTHO05D003442 5.9e-14 81.6 113 38.9
PGR004G2025 Punica granatum HOM05D001890 ORTHO05D003442 7.7e-14 81.3 105 41.9
DCAR_013449 Daucus carota HOM05D001890 ORTHO05D003442 1.0e-13 80.9 112 38.4
TAR623G0995 Trochodendron aralioides HOM05D001890 ORTHO05D003442 1.0e-13 80.9 109 35.8
CAN.G911.29 Capsicum annuum HOM05D001890 ORTHO05D003442 1.3e-13 80.5 100 37.0
Cfa020085 Carpinus fangiana HOM05D001890 ORTHO05D003442 1.3e-13 80.5 97 40.2
CiPaw.09G022800 Carya illinoinensis HOM05D001890 ORTHO05D003442 1.3e-13 80.5 96 43.8
Sc07g0006350 Simmondsia chinensis HOM05D001890 ORTHO05D003442 1.3e-13 80.5 117 41.0
CSS0016780 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D003442 1.7e-13 80.1 96 40.6
Psat3g028200 Pisum sativum HOM05D001890 ORTHO05D003442 1.7e-13 80.1 79 44.3
MSTRG.5917 Avicennia marina HOM05D001890 ORTHO05D003442 2.2e-13 79.7 106 41.5
CANSAT64G0653 Cannabis sativa HOM05D001890 ORTHO05D003442 2.2e-13 79.7 100 38.0
PSO384G0895 Papaver somniferum HOM05D001890 ORTHO05D003442 2.2e-13 79.7 118 39.0
TWI77G0744 Tripterygium wilfordii HOM05D001890 ORTHO05D003442 2.2e-13 79.7 115 33.0
arahy.Tifrunner.gnm1.ann1.3V0CBS Arachis hypogaea HOM05D001890 ORTHO05D003442 2.9e-13 79.3 81 45.7
arahy.Tifrunner.gnm1.ann1.JU9MFG Arachis hypogaea HOM05D001890 ORTHO05D003442 2.9e-13 79.3 81 45.7
EL10Ac5g11825 Beta vulgaris HOM05D001890 ORTHO05D003442 2.9e-13 79.3 111 39.6
Cc01_g02980 Coffea canephora HOM05D001890 ORTHO05D003442 2.9e-13 79.3 96 40.6
HanXRQChr02g0053331 Helianthus annuus HOM05D001890 ORTHO05D003442 2.9e-13 79.3 123 33.3
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 3.8e-13 79.0 81 43.2
Lalb_Chr20g0111261 Lupinus albus HOM05D001890 ORTHO05D003442 3.8e-13 79.0 101 39.6
Nn2g14393 Nelumbo nucifera HOM05D001890 ORTHO05D003442 3.8e-13 79.0 114 36.0
PSO339G0680 Papaver somniferum HOM05D001890 ORTHO05D003442 5.0e-13 78.6 118 37.3
SGA_v2.0_scaffold31G12814 Striga asiatica HOM05D001890 ORTHO05D003442 5.0e-13 78.6 110 35.5
TAR369G0675 Trochodendron aralioides HOM05D001890 ORTHO05D003442 5.0e-13 78.6 101 37.6
vmacro09092 Vaccinium macrocarpon HOM05D001890 ORTHO05D003442 5.0e-13 78.6 111 36.0
Cpa.g.sc104.3 Carica papaya HOM05D001890 ORTHO05D003442 6.5e-13 78.2 83 45.8
PSO063G3472 Papaver somniferum HOM05D001890 ORTHO05D003442 6.5e-13 78.2 81 45.7
Potri.006G201000 Populus trichocarpa HOM05D001890 ORTHO05D003442 6.5e-13 78.2 105 39.0
CAN.G674.15 Capsicum annuum HOM05D001890 ORTHO05D003442 8.5e-13 77.8 101 38.6
Migut.L01851 Erythranthe guttata HOM05D001890 ORTHO05D003442 8.5e-13 77.8 99 39.4
Lj1g0026398 Lotus japonicus HOM05D001890 ORTHO05D003442 8.5e-13 77.8 77 46.8
QL07p026881 Quercus lobata HOM05D001890 ORTHO05D003442 8.5e-13 77.8 94 42.6
TPR.G25807 Trifolium pratense HOM05D001890 ORTHO05D003442 8.5e-13 77.8 80 42.5
Nitab4.5_0000721g0220 Nicotiana tabacum HOM05D001890 ORTHO05D003442 1.1e-12 77.4 101 38.6
Peaxi162Scf00203g00101 Petunia axillaris HOM05D001890 ORTHO05D003442 1.1e-12 77.4 95 38.9
Actinidia06190 Actinidia chinensis HOM05D001890 ORTHO05D003442 1.4e-12 77.0 88 39.8
BcaB04g18657 Brassica carinata HOM05D001890 ORTHO05D003442 1.4e-12 77.0 96 35.4
ATR0697G280 Amborella trichopoda HOM05D001890 ORTHO05D003442 1.9e-12 76.6 84 39.3
AT3G11720 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 1.9e-12 76.6 80 45.0
FvH4_6g20770 Fragaria vesca HOM05D001890 ORTHO05D003442 1.9e-12 76.6 99 38.4
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.9e-12 76.6 99 38.4
FAN14G1848 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.9e-12 76.6 99 38.4
Sopen10g032280 Solanum pennellii HOM05D001890 ORTHO05D003442 1.9e-12 76.6 101 37.6
Actinidia07949 Actinidia chinensis HOM05D001890 ORTHO05D003442 2.5e-12 76.3 103 38.8
arahy.Tifrunner.gnm1.ann1.AQHB6D Arachis hypogaea HOM05D001890 ORTHO05D003442 2.5e-12 76.3 108 38.0
Cc06_g06840 Coffea canephora HOM05D001890 ORTHO05D003442 2.5e-12 76.3 134 35.8
Lj5g0000561 Lotus japonicus HOM05D001890 ORTHO05D003442 2.5e-12 76.3 88 40.9
Medtr1g055315 Medicago truncatula HOM05D001890 ORTHO05D003442 2.5e-12 76.3 88 42.0
Thhalv10013326m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 3.2e-12 75.9 86 41.9
Solyc10g081770.3 Solanum lycopersicum HOM05D001890 ORTHO05D003442 3.2e-12 75.9 99 37.4
FAN05G0175 Fragaria x ananassa HOM05D001890 ORTHO05D003442 4.2e-12 75.5 82 42.7
PGSC0003DMG400028231 Solanum tuberosum HOM05D001890 ORTHO05D003442 4.2e-12 75.5 101 38.6
PSO384G4950 Papaver somniferum HOM05D001890 ORTHO05D003442 5.5e-12 75.1 81 43.2
AL3G23280 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 7.2e-12 74.7 80 42.5
BcaC06g32374 Brassica carinata HOM05D001890 ORTHO05D003442 7.2e-12 74.7 95 40.0
C09p70360 Brassica napus HOM05D001890 ORTHO05D003442 7.2e-12 74.7 95 40.0
BraA03t12885Z Brassica rapa HOM05D001890 ORTHO05D003442 7.2e-12 74.7 93 35.5
CARHR086270 Cardamine hirsuta HOM05D001890 ORTHO05D003442 7.2e-12 74.7 80 43.8
FAN09G2041 Fragaria x ananassa HOM05D001890 ORTHO05D003442 7.2e-12 74.7 82 41.5
Lsat_1_v5_gn_6_34701 Lactuca sativa HOM05D001890 ORTHO05D003442 7.2e-12 74.7 117 35.0
Hund10836 Selenicereus undatus HOM05D001890 ORTHO05D003442 7.2e-12 74.7 112 38.4
AL6G16530 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 9.4e-12 74.3 86 39.5
CARHR206750 Cardamine hirsuta HOM05D001890 ORTHO05D003442 9.4e-12 74.3 86 41.9
Glyma.03G203900 Glycine max HOM05D001890 ORTHO05D003442 9.4e-12 74.3 83 41.0
MBI11_g01309_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D003442 9.4e-12 74.3 96 35.4
PSO339G5959 Papaver somniferum HOM05D001890 ORTHO05D003442 9.4e-12 74.3 81 43.2
RcHm_v2.0_Chr3g0476671 Rosa chinensis HOM05D001890 ORTHO05D003442 9.4e-12 74.3 81 43.2
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 9.4e-12 74.3 98 38.8
BraA03t09636Z Brassica rapa HOM05D001890 ORTHO05D003442 1.2e-11 73.9 99 38.4
Thhalv10020420m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 1.2e-11 73.9 83 42.2
FAN05G0573 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.2e-11 73.9 82 42.7
AT5G06440 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 1.6e-11 73.6 86 39.5
A10p29950 Brassica napus HOM05D001890 ORTHO05D003442 1.6e-11 73.6 82 41.5
BolC9t59781H Brassica oleracea HOM05D001890 ORTHO05D003442 1.6e-11 73.6 95 38.9
BraA10t45034Z Brassica rapa HOM05D001890 ORTHO05D003442 1.6e-11 73.6 82 41.5
Rhsim02G0181100 Rhododendron simsii HOM05D001890 ORTHO05D003442 1.6e-11 73.6 106 34.9
THA.LOC104826799 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 1.6e-11 73.6 86 41.9
GSVIVG01022534001 Vitis vinifera HOM05D001890 ORTHO05D003442 1.6e-11 73.6 99 39.4
C03p45110 Brassica napus HOM05D001890 ORTHO05D003442 2.1e-11 73.2 96 34.4
BolC3t16775H Brassica oleracea HOM05D001890 ORTHO05D003442 2.1e-11 73.2 96 34.4
A03p37250 Brassica napus HOM05D001890 ORTHO05D003442 2.7e-11 72.8 90 35.6
Glyma.19G201300 Glycine max HOM05D001890 ORTHO05D003442 4.7e-11 72.0 83 38.6
Lj1A1058T56 Lonicera japonica HOM05D001890 ORTHO05D003442 4.7e-11 72.0 81 43.2
MD14G1042900 Malus domestica HOM05D001890 ORTHO05D003442 4.7e-11 72.0 93 38.7
Phvul.001G197400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 4.7e-11 72.0 78 44.9
Aa31sc52G250 Aethionema arabicum HOM05D001890 ORTHO05D003442 6.1e-11 71.6 88 38.6
Carub.0006s0532 Capsella rubella HOM05D001890 ORTHO05D003442 6.1e-11 71.6 86 39.5
BcaC06g32575 Brassica carinata HOM05D001890 ORTHO05D003442 8.0e-11 71.2 82 40.2
Nn6g34599 Nelumbo nucifera HOM05D001890 ORTHO05D003442 8.0e-11 71.2 110 36.4
Prupe.7G091200 Prunus persica HOM05D001890 ORTHO05D003442 1.0e-10 70.9 87 37.9
BraA05t22558Z Brassica rapa HOM05D001890 ORTHO05D003442 1.4e-10 70.5 80 41.2
Sp6g36420 Schrenkiella parvula HOM05D001890 ORTHO05D003442 1.4e-10 70.5 86 38.4
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 1.8e-10 70.1 96 38.5
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 1.8e-10 70.1 96 38.5
BcaC01g04089 Brassica carinata HOM05D001890 ORTHO05D003442 2.3e-10 69.7 93 33.3
A03p02730 Brassica napus HOM05D001890 ORTHO05D003442 3.0e-10 69.3 91 39.6
A05p37600 Brassica napus HOM05D001890 ORTHO05D003442 3.0e-10 69.3 80 41.2
BolC5t34281H Brassica oleracea HOM05D001890 ORTHO05D003442 5.2e-10 68.6 80 40.0
MD12G1043900 Malus domestica HOM05D001890 ORTHO05D003442 5.2e-10 68.6 80 40.0
Peaxi162Scf00675g00056 Petunia axillaris HOM05D001890 ORTHO05D003442 5.2e-10 68.6 101 36.6
Aa31LG3G5200 Aethionema arabicum HOM05D001890 ORTHO05D003442 6.7e-10 68.2 86 37.2
BcaB06g25587 Brassica carinata HOM05D001890 ORTHO05D003442 6.7e-10 68.2 80 40.0
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 8.8e-10 67.8 70 41.4
BcaC05g29335 Brassica carinata HOM05D001890 ORTHO05D003442 1.1e-09 67.4 80 38.8
Sp3g09950 Schrenkiella parvula HOM05D001890 ORTHO05D003442 2.6e-09 66.2 80 41.2
C05p56160 Brassica napus HOM05D001890 ORTHO05D003442 3.3e-09 65.9 85 37.6
THA.LOC104816629 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 4.4e-09 65.5 65 46.2
Carub.0003s1106 Capsella rubella HOM05D001890 ORTHO05D003442 7.4e-09 64.7 80 40.0
SGA_v2.0_scaffold392G50676 Striga asiatica HOM05D001890 ORTHO05D003442 1.1e-07 60.8 97 35.1
Aqoxy2G00642 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 5.3e-07 58.5 113 33.6
Sabra06G0154700 Salix brachista HOM05D001890 ORTHO05D003442 1.2e-06 57.4 110 30.9
Nitab4.5_0001918g0040 Nicotiana tabacum HOM05D001890 ORTHO05D003442 7.7e-06 54.7 111 32.4


User provided reference genes

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