Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.8e-69 265.8 133 100.0
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 4.5e-36 154.8 133 60.9
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 1.0e-35 153.7 133 57.9
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 1.7e-35 152.9 133 59.4
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 1.7e-35 152.9 133 57.1
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 3.8e-35 151.8 135 60.7
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 3.8e-35 151.8 133 59.4
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 3.8e-35 151.8 135 62.2
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 5.0e-35 151.4 133 61.7
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 5.0e-35 151.4 133 59.4
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 5.0e-35 151.4 133 57.9
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 5.0e-35 151.4 134 59.7
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 6.5e-35 151.0 133 58.6
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 6.5e-35 151.0 135 57.8
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 8.5e-35 150.6 133 59.4
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 1.1e-34 150.2 133 58.6
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 1.1e-34 150.2 132 56.1
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 1.1e-34 150.2 135 60.7
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 1.1e-34 150.2 133 56.4
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.9e-34 149.4 133 58.6
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 1.9e-34 149.4 134 57.5
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 1.9e-34 149.4 134 57.5
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 2.5e-34 149.1 133 56.4
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.5e-34 149.1 133 57.9
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 4.2e-34 148.3 135 57.8
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 4.2e-34 148.3 133 56.4
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 5.5e-34 147.9 133 57.9
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 5.5e-34 147.9 133 57.1
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 5.5e-34 147.9 135 60.0
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 7.2e-34 147.5 133 54.9
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 7.2e-34 147.5 133 57.1
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 7.2e-34 147.5 133 56.4
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 1.2e-33 146.7 134 56.0
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 1.2e-33 146.7 134 56.7
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 2.1e-33 146.0 133 57.1
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 2.1e-33 146.0 133 57.9
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 2.1e-33 146.0 133 57.9
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 2.7e-33 145.6 133 57.9
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 2.7e-33 145.6 133 57.9
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 3.6e-33 145.2 134 55.2
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 3.6e-33 145.2 135 57.8
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 3.6e-33 145.2 133 56.4
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 4.7e-33 144.8 134 57.5
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 6.1e-33 144.4 133 55.6
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 8.0e-33 144.1 135 55.6
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 1.0e-32 143.7 133 51.9
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 1.0e-32 143.7 133 54.9
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.0e-32 143.7 133 59.4
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 1.8e-32 142.9 133 57.9
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 2.3e-32 142.5 133 55.6
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 3.0e-32 142.1 133 53.4
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 3.0e-32 142.1 133 53.4
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 3.0e-32 142.1 133 57.9
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 4.0e-32 141.7 133 51.9
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 5.2e-32 141.4 133 58.6
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 5.2e-32 141.4 133 58.6
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 6.8e-32 141.0 134 54.5
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 6.8e-32 141.0 135 53.3
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 1.2e-31 140.2 133 51.9
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 1.5e-31 139.8 133 58.6
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.5e-31 139.8 134 52.2
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 2.0e-31 139.4 133 54.1
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 2.0e-31 139.4 133 54.9
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 2.0e-31 139.4 133 53.4
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 2.6e-31 139.0 134 53.7
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 3.4e-31 138.7 133 55.6
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 5.7e-31 137.9 153 48.4
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.3e-30 136.7 134 50.7
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 1.3e-30 136.7 134 53.7
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.7e-30 136.3 134 50.7
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 1.1e-29 133.7 125 58.4
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 1.1e-29 133.7 125 58.4
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 1.8e-29 132.9 133 54.9
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 5.3e-29 131.3 133 52.6
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 9.1e-29 130.6 133 55.6
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 9.1e-29 130.6 125 56.0
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 1.6e-28 129.8 135 54.8
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 5.9e-28 127.9 148 46.6
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.3e-27 126.7 126 52.4
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 5.2e-24 114.8 159 45.3
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.2e-23 113.6 173 41.0
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 7.5e-23 110.9 132 41.7
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 3.7e-22 108.6 123 51.2
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 5.4e-21 104.8 119 48.7
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.7e-20 102.4 103 53.4
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 5.9e-20 101.3 137 45.3
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 1.7e-19 99.8 90 57.8
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 2.6e-15 85.9 70 61.4
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 7.5e-15 84.3 129 41.1
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 1.7e-14 83.2 70 58.6
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 3.7e-14 82.0 135 35.6
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 4.9e-14 81.6 135 37.8
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 4.9e-14 81.6 151 37.1
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 6.3e-14 81.3 70 55.7
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 5.4e-13 78.2 135 37.0
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 9.2e-13 77.4 63 60.3
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 9.2e-13 77.4 62 62.9
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 9.2e-13 77.4 70 57.1
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 7.8e-12 74.3 142 35.9
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 7.3e-10 67.8 48 58.3
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 2.3e-08 62.8 60 56.7
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 6.8e-08 61.2 44 61.4
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 8.9e-08 60.8 44 54.5
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 4.4e-07 58.5 124 38.7
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 4.9e-06 55.1 33 72.7
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 8.3e-06 54.3 48 54.2


User provided reference genes

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