Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO352G0037 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.0e-122 443.4 210 100.0
BolC1t05245H Brassica oleracea HOM05D005009 ORTHO05D006203 4.2e-60 235.3 207 52.7
Thhalv10021577m.g Eutrema salsugineum HOM05D005009 ORTHO05D006203 9.3e-60 234.2 210 52.4
Potri.003G193900 Populus trichocarpa HOM05D005009 ORTHO05D006203 9.3e-60 234.2 210 53.8
BcaC09g48230 Brassica carinata HOM05D005009 ORTHO05D006203 1.2e-59 233.8 206 51.5
C01p53010 Brassica napus HOM05D005009 ORTHO05D006203 1.2e-59 233.8 207 52.7
Sp3g10520 Schrenkiella parvula HOM05D005009 ORTHO05D006203 1.2e-59 233.8 206 52.4
Pp3c7_7130 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.6e-59 233.4 208 55.8
A03p37590 Brassica napus HOM05D005009 ORTHO05D006203 2.7e-59 232.6 207 52.2
C03p45580 Brassica napus HOM05D005009 ORTHO05D006203 4.6e-59 231.9 207 51.7
Mapoly0109s0062 Marchantia polymorpha HOM05D005009 ORTHO05D006203 4.6e-59 231.9 206 54.4
FvH4_7g03830 Fragaria vesca HOM05D005009 ORTHO05D006203 6.0e-59 231.5 210 52.9
FAN03G3221 Fragaria x ananassa HOM05D005009 ORTHO05D006203 6.0e-59 231.5 210 52.9
FAN06G1190 Fragaria x ananassa HOM05D005009 ORTHO05D006203 6.0e-59 231.5 210 52.9
BolC3t16835H Brassica oleracea HOM05D005009 ORTHO05D006203 7.8e-59 231.1 207 51.7
RcHm_v2.0_Chr1g0327201 Rosa chinensis HOM05D005009 ORTHO05D006203 7.8e-59 231.1 210 52.9
BcaC01g04053 Brassica carinata HOM05D005009 ORTHO05D006203 1.3e-58 230.3 206 51.5
FAN10G3328 Fragaria x ananassa HOM05D005009 ORTHO05D006203 1.7e-58 229.9 206 53.4
SEGI_18977 Sequoiadendron giganteum HOM05D005009 ORTHO05D006203 1.7e-58 229.9 206 53.9
BcaB04g18685 Brassica carinata HOM05D005009 ORTHO05D006203 2.3e-58 229.6 206 51.0
Gohir.A03G073900 Gossypium hirsutum HOM05D005009 ORTHO05D006203 3.9e-58 228.8 206 53.4
Gohir.D03G100300 Gossypium hirsutum HOM05D005009 ORTHO05D006203 3.9e-58 228.8 206 53.4
Gorai.003G105400 Gossypium raimondii HOM05D005009 ORTHO05D006203 3.9e-58 228.8 206 53.4
A06p13990 Brassica napus HOM05D005009 ORTHO05D006203 5.1e-58 228.4 207 51.2
Eucgr.E03953 Eucalyptus grandis HOM05D005009 ORTHO05D006203 5.1e-58 228.4 206 53.4
Prupe.2G043300 Prunus persica HOM05D005009 ORTHO05D006203 5.1e-58 228.4 206 52.9
QL04p021447 Quercus lobata HOM05D005009 ORTHO05D006203 5.1e-58 228.4 206 52.9
QL07p029267 Quercus lobata HOM05D005009 ORTHO05D006203 5.1e-58 228.4 206 52.9
ATR0307G112 Amborella trichopoda HOM05D005009 ORTHO05D006203 6.6e-58 228.0 206 53.4
CiPaw.14G009400 Carya illinoinensis HOM05D005009 ORTHO05D006203 6.6e-58 228.0 206 52.9
Lsat_1_v5_gn_1_117041 Lactuca sativa HOM05D005009 ORTHO05D006203 6.6e-58 228.0 206 53.4
Phvul.011G192750 Phaseolus vulgaris HOM05D005009 ORTHO05D006203 6.6e-58 228.0 206 52.4
Medtr8g040630 Medicago truncatula HOM05D005009 ORTHO05D006203 8.7e-58 227.6 206 52.4
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 53.9
Aqoxy2G00437 Aquilegia oxysepala HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 52.4
AL3G23960 Arabidopsis lyrata HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 51.0
Haze_02993 Corylus avellana HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 52.9
Migut.B01192 Erythranthe guttata HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 52.4
Glyma.09G090300 Glycine max HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 51.9
Lalb_Chr19g0132931 Lupinus albus HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 52.9
PSO384G0249 Papaver somniferum HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 52.9
Psat4g146480 Pisum sativum HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 52.4
SMO137G0355 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 52.4
THA.LOC104826749 Tarenaya hassleriana HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 51.9
Thecc.03G114300 Theobroma cacao HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 53.4
TAR633G2352 Trochodendron aralioides HOM05D005009 ORTHO05D006203 1.1e-57 227.3 206 52.4
Actinidia06220 Actinidia chinensis HOM05D005009 ORTHO05D006203 1.5e-57 226.9 206 53.4
Cc03_g14060 Coffea canephora HOM05D005009 ORTHO05D006203 1.5e-57 226.9 206 51.9
Nitab4.5_0002838g0060 Nicotiana tabacum HOM05D005009 ORTHO05D006203 1.5e-57 226.9 206 52.9
TPR.G8532 Trifolium pratense HOM05D005009 ORTHO05D006203 1.5e-57 226.9 206 52.4
CSS0011052 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 1.9e-57 226.5 206 52.9
Ca_24007_v3 Cicer arietinum L. HOM05D005009 ORTHO05D006203 1.9e-57 226.5 208 51.9
Dinv32009 Davidia involucrata HOM05D005009 ORTHO05D006203 1.9e-57 226.5 206 52.4
Lj3g0027433 Lotus japonicus HOM05D005009 ORTHO05D006203 1.9e-57 226.5 206 52.4
Nn7g36825 Nelumbo nucifera HOM05D005009 ORTHO05D006203 1.9e-57 226.5 206 51.9
PGR031G2406 Punica granatum HOM05D005009 ORTHO05D006203 1.9e-57 226.5 206 53.4
Solyc01g096610.4 Solanum lycopersicum HOM05D005009 ORTHO05D006203 1.9e-57 226.5 206 52.9
Sopen01g040340 Solanum pennellii HOM05D005009 ORTHO05D006203 1.9e-57 226.5 206 52.9
PGSC0003DMG401003286 Solanum tuberosum HOM05D005009 ORTHO05D006203 1.9e-57 226.5 206 52.9
Carub.0003s1167 Capsella rubella HOM05D005009 ORTHO05D006203 2.5e-57 226.1 206 51.0
DCAR_006603 Daucus carota HOM05D005009 ORTHO05D006203 2.5e-57 226.1 206 51.9
ECA248G2538 Erigeron canadensis HOM05D005009 ORTHO05D006203 2.5e-57 226.1 206 52.4
Manes.11G007500 Manihot esculenta HOM05D005009 ORTHO05D006203 2.5e-57 226.1 206 52.9
PSO339G0131 Papaver somniferum HOM05D005009 ORTHO05D006203 2.5e-57 226.1 206 52.4
Atru.chr12.1310 Acer truncatum HOM05D005009 ORTHO05D006203 3.3e-57 225.7 206 52.9
MSTRG.20500 Avicennia marina HOM05D005009 ORTHO05D006203 3.3e-57 225.7 206 51.9
Ciclev10002585m.g Citrus clementina HOM05D005009 ORTHO05D006203 3.3e-57 225.7 206 53.9
Duzib068G0995 Durio zibethinus HOM05D005009 ORTHO05D006203 3.3e-57 225.7 206 52.4
AT3G12300 Arabidopsis thaliana HOM05D005009 ORTHO05D006203 4.3e-57 225.3 206 50.5
Duzib084G0080 Durio zibethinus HOM05D005009 ORTHO05D006203 4.3e-57 225.3 206 52.9
PRCOL_00001494 Prasinoderma coloniale HOM05D005009 ORTHO05D006203 4.3e-57 225.3 206 51.9
GSVIVG01036607001 Vitis vinifera HOM05D005009 ORTHO05D006203 4.3e-57 225.3 206 52.4
COL.COLO4_32171 Corchorus olitorius HOM05D000011 ORTHO05D006203 5.6e-57 224.9 206 51.5
HanXRQChr11g0341231 Helianthus annuus HOM05D005009 ORTHO05D006203 5.6e-57 224.9 206 51.9
MBI19_g44926_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 5.6e-57 224.9 205 52.7
TWI15G1146 Tripterygium wilfordii HOM05D005009 ORTHO05D006203 5.6e-57 224.9 206 51.9
MELO3C034019.2 Cucumis melo HOM05D005009 ORTHO05D006203 7.3e-57 224.6 206 51.5
Eucgr.G03210 Eucalyptus grandis HOM05D005009 ORTHO05D006203 7.3e-57 224.6 206 52.4
CDE08G1579 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 9.6e-57 224.2 206 52.9
AUR62031741 Chenopodium quinoa HOM05D005009 ORTHO05D006203 9.6e-57 224.2 206 51.0
Dinv11234 Davidia involucrata HOM05D005009 ORTHO05D006203 1.3e-56 223.8 206 50.5
SGA_v2.0_scaffold408G51079 Striga asiatica HOM05D005009 ORTHO05D006203 1.3e-56 223.8 206 51.5
Zm00001eb317990 Zea mays HOM05D005009 ORTHO05D006203 1.3e-56 223.8 206 52.4
MBI19_g37444_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 1.6e-56 223.4 214 51.9
EL10Ac2g02762 Beta vulgaris HOM05D005009 ORTHO05D006203 3.6e-56 222.2 206 51.0
AUR62032626 Chenopodium quinoa HOM05D005009 ORTHO05D006203 3.6e-56 222.2 206 50.5
MCO01G737 Micromonas commoda HOM05D005009 ORTHO05D006203 3.6e-56 222.2 206 51.5
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea HOM05D005009 ORTHO05D006203 4.8e-56 221.9 230 47.8
ClCG05G027020 Citrullus lanatus HOM05D005009 ORTHO05D006203 4.8e-56 221.9 206 51.5
GSVIVG01028667001 Vitis vinifera HOM05D005009 ORTHO05D006203 4.8e-56 221.9 207 51.2
Cre07.g351650 Chlamydomonas reinhardtii HOM05D005009 ORTHO05D006203 1.1e-55 220.7 206 51.0
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.1e-55 220.7 206 50.5
Sabra03G0144600 Salix brachista HOM05D005009 ORTHO05D006203 1.1e-55 220.7 218 50.0
Hund13390 Selenicereus undatus HOM05D005009 ORTHO05D006203 1.4e-55 220.3 209 50.2
SMO137G0211 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.8e-55 219.9 207 52.2
CANSAT01G2494 Cannabis sativa HOM05D005009 ORTHO05D006203 3.1e-55 219.2 206 51.0
unitig_22.g5330 Utricularia gibba HOM05D005009 ORTHO05D006203 4.0e-55 218.8 211 50.7
CsaV3_5G036940 Cucumis sativus L. HOM05D005009 ORTHO05D006203 6.9e-55 218.0 206 50.0
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea HOM05D005009 ORTHO05D006203 4.4e-54 215.3 230 46.5
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla HOM05D005009 ORTHO05D006203 9.9e-54 214.2 221 48.4
Ah.01g018000 Amaranthus hybridus HOM05D005009 ORTHO05D006203 1.7e-53 213.4 201 50.2
Rhsim07G0069300 Rhododendron simsii HOM05D005009 ORTHO05D006203 2.9e-53 212.6 233 46.8
Sed0026819 Sechium edule HOM05D005009 ORTHO05D006203 2.9e-53 212.6 234 46.2
VMungo1127G1850 Vigna mungo HOM05D005009 ORTHO05D006203 4.2e-52 208.8 159 57.9
CSS0003702 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 3.5e-51 205.7 158 58.2
Peaxi162Scf00220g00315 Petunia axillaris HOM05D005009 ORTHO05D006203 3.5e-51 205.7 157 58.6
Aa31LG3G6530 Aethionema arabicum HOM05D005009 ORTHO05D006203 1.0e-50 204.1 157 55.4
Cpa.g.sc82.9 Carica papaya HOM05D005009 ORTHO05D006203 5.1e-50 201.8 157 56.7
Os09g0510200 Oryza sativa ssp. japonica HOM05D005009 ORTHO05D006203 8.7e-50 201.1 157 56.7
vmacro21942 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 1.1e-49 200.7 169 55.6
vmacro23458 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 1.1e-49 200.7 169 55.6
SHI34551 Sapria himalayana HOM05D005009 ORTHO05D006203 5.6e-49 198.4 159 55.3
Glyma.13G184700 Glycine max HOM05D005009 ORTHO05D006203 7.3e-49 198.0 159 55.3
Haze_26638 Corylus avellana HOM05D005009 ORTHO05D006203 1.4e-47 193.7 206 46.6
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 1.9e-44 183.3 212 43.9
Lj9A658G62 Lonicera japonica HOM05D005009 ORTHO05D006203 4.3e-41 172.2 161 50.3
SMO232G0039 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.4e-36 157.1 201 42.3
CDE08G0779 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 4.2e-36 155.6 115 60.9
Sed0013386 Sechium edule HOM05D005009 ORTHO05D006203 1.6e-35 153.7 129 54.3
BraA03t12913Z Brassica rapa HOM05D005009 ORTHO05D006203 1.0e-34 151.0 107 58.9
Pp3c25_460 Physcomitrium patens HOM05D005009 ORTHO05D006203 6.7e-34 148.3 207 39.6
Oeu064146.2 Olea europaea HOM05D005009 ORTHO05D006203 1.9e-33 146.7 111 59.5
Pp3c6_12450 Physcomitrium patens HOM05D005009 ORTHO05D006203 5.0e-29 132.1 157 42.0
Glyma.13G188400 Glycine max HOM05D005009 ORTHO05D006203 2.5e-28 129.8 184 39.7
MD02G1276800 Malus domestica HOM05D005009 ORTHO05D006203 3.5e-27 125.9 142 46.5
HPP92_011756 Vanilla planifolia HOM05D005009 ORTHO05D006203 2.3e-26 123.2 127 49.6
Nitab4.5_0004168g0130 Nicotiana tabacum HOM05D005009 ORTHO05D006203 1.1e-25 120.9 127 49.6
HPP92_011758 Vanilla planifolia HOM05D005009 ORTHO05D006203 1.9e-25 120.2 166 41.0
MD02G1276900 Malus domestica HOM05D005009 ORTHO05D006203 2.6e-22 109.8 77 59.7
Glyma.13G192001 Glycine max HOM05D005009 ORTHO05D006203 5.9e-22 108.6 77 58.4
Actinidia07967 Actinidia chinensis HOM05D005009 ORTHO05D006203 1.7e-21 107.1 77 58.4
Cfa001149 Carpinus fangiana HOM05D005009 ORTHO05D006203 2.9e-21 106.3 77 57.1
HPP92_011747 Vanilla planifolia HOM05D005009 ORTHO05D006203 2.9e-21 106.3 77 58.4
ClCG05G014250 Citrullus lanatus HOM05D005009 ORTHO05D006203 2.5e-20 103.2 177 35.0
CARHR086850 Cardamine hirsuta HOM05D005009 ORTHO05D006203 9.4e-20 101.3 68 58.8
Glyma.13G190100 Glycine max HOM05D005009 ORTHO05D006203 9.4e-20 101.3 71 57.7
Glyma.13G188051 Glycine max HOM05D005009 ORTHO05D006203 2.1e-19 100.1 87 51.7
MD07G1044300 Malus domestica HOM05D005009 ORTHO05D006203 2.7e-19 99.8 68 60.3
Sc11g0006340 Simmondsia chinensis HOM05D005009 ORTHO05D006203 7.9e-19 98.2 78 55.1
BcaC09g48229 Brassica carinata HOM05D005009 ORTHO05D006203 3.0e-18 96.3 69 58.0
C01p53030 Brassica napus HOM05D005009 ORTHO05D006203 3.0e-18 96.3 69 58.0
BolC1t05246H Brassica oleracea HOM05D005009 ORTHO05D006203 3.9e-18 95.9 69 58.0
Prupe.3G123900 Prunus persica HOM05D005009 ORTHO05D006203 1.2e-11 74.3 97 46.4
A01p39420 Brassica napus HOM05D005009 ORTHO05D006203 5.3e-07 58.9 38 55.3
A03p22660 Brassica napus HOM05D005009 ORTHO05D033042 1.2e-06 57.8 37 56.8
A10p02030 Brassica napus HOM05D005009 ORTHO05D006203 1.2e-06 57.8 37 56.8
C03p63540 Brassica napus HOM05D005009 ORTHO05D033042 1.2e-06 57.8 37 56.8
BraA02t08111Z Brassica rapa HOM05D005009 ORTHO05D033042 1.2e-06 57.8 37 56.8
Manes.04G156350 Manihot esculenta HOM05D005009 ORTHO05D006203 3.5e-06 56.2 48 47.9
arahy.Tifrunner.gnm1.ann1.WDN55T Arachis hypogaea HOM05D000001 ORTHO05D009381 4.5e-06 55.8 47 48.9


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