Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO351G0633 Selaginella moellendorffii HOM05D001137 ORTHO05D001967 2.9e-99 365.2 174 100.0
SMO272G0035 Selaginella moellendorffii HOM05D001137 ORTHO05D001967 1.3e-11 73.9 99 48.5
SMO197G0020 Selaginella moellendorffii HOM05D038232 ORTHO05D001967 6.8e-08 61.6 35 80.0
Rhsim07G0183300 Rhododendron simsii HOM05D001137 ORTHO05D001967 8.9e-08 61.2 53 54.7
Gohir.A13G108500 Gossypium hirsutum HOM05D001137 ORTHO05D001967 2.0e-07 60.1 79 41.8
Gohir.D13G111400 Gossypium hirsutum HOM05D001137 ORTHO05D001967 2.0e-07 60.1 79 41.8
Gorai.013G125100 Gossypium raimondii HOM05D001137 ORTHO05D001967 2.0e-07 60.1 79 41.8
Oeu020840.1 Olea europaea HOM05D001137 ORTHO05D001967 7.5e-07 58.2 68 47.1
Os12g0540800 Oryza sativa ssp. japonica HOM05D001137 ORTHO05D001967 9.8e-07 57.8 49 57.1
PGR031G2322 Punica granatum HOM05D001137 ORTHO05D001967 9.8e-07 57.8 81 43.2
TWI56G1154 Tripterygium wilfordii HOM05D001137 ORTHO05D001967 9.8e-07 57.8 50 58.0
Mapoly0004s0054 Marchantia polymorpha HOM05D001137 ORTHO05D001967 1.3e-06 57.4 75 44.0
Thhalv10003780m.g Eutrema salsugineum HOM05D001137 ORTHO05D001967 1.7e-06 57.0 47 57.4
Zm00001eb137610 Zea mays HOM05D001137 ORTHO05D001967 1.7e-06 57.0 81 40.7
Aqoxy5G00704 Aquilegia oxysepala HOM05D001137 ORTHO05D001967 2.2e-06 56.6 47 57.4
Cpa.g.sc48.78 Carica papaya HOM05D001137 ORTHO05D001967 2.2e-06 56.6 36 69.4
Duzib106G0557 Durio zibethinus HOM05D001137 ORTHO05D001967 2.2e-06 56.6 49 57.1
HPP92_011343 Vanilla planifolia HOM05D001137 ORTHO05D001967 2.2e-06 56.6 47 59.6
A02p38690 Brassica napus HOM05D001137 ORTHO05D001967 2.9e-06 56.2 36 69.4
C02p58200 Brassica napus HOM05D001137 ORTHO05D001967 2.9e-06 56.2 36 69.4
BolC2t11887H Brassica oleracea HOM05D001137 ORTHO05D001967 2.9e-06 56.2 36 69.4
BraA02t08845Z Brassica rapa HOM05D001137 ORTHO05D001967 2.9e-06 56.2 36 69.4
PSO170G2566 Papaver somniferum HOM05D001137 ORTHO05D001967 2.9e-06 56.2 50 54.0
SEGI_13850 Sequoiadendron giganteum HOM05D001137 ORTHO05D001967 2.9e-06 56.2 53 56.6
Ah.04g160450 Amaranthus hybridus HOM05D001137 ORTHO05D001967 3.7e-06 55.8 49 55.1
PSO210G0810 Papaver somniferum HOM05D001137 ORTHO05D001967 3.7e-06 55.8 50 54.0
SGA_v2.0_scaffold80G25790 Striga asiatica HOM05D001137 ORTHO05D001967 3.7e-06 55.8 49 53.1
CSS0025432 Camellia sinensis var. sinensis HOM05D001137 ORTHO05D001967 4.9e-06 55.5 49 55.1
CSS0049898 Camellia sinensis var. sinensis HOM05D001137 ORTHO05D001967 4.9e-06 55.5 50 54.0
AUR62000789 Chenopodium quinoa HOM05D001137 ORTHO05D001967 4.9e-06 55.5 49 55.1
AUR62005178 Chenopodium quinoa HOM05D001137 ORTHO05D001967 4.9e-06 55.5 49 55.1
Duzib177G0730 Durio zibethinus HOM05D001137 ORTHO05D001967 4.9e-06 55.5 50 54.0
Gohir.A11G266400 Gossypium hirsutum HOM05D001137 ORTHO05D001967 4.9e-06 55.5 49 55.1
Gohir.D11G276700 Gossypium hirsutum HOM05D001137 ORTHO05D001967 4.9e-06 55.5 49 55.1
Gorai.007G298800 Gossypium raimondii HOM05D001137 ORTHO05D001967 4.9e-06 55.5 49 55.1
QL03p012727 Quercus lobata HOM05D001137 ORTHO05D001967 4.9e-06 55.5 50 54.0
Sabra05G0032200 Salix brachista HOM05D001137 ORTHO05D001967 4.9e-06 55.5 47 57.4
Hund07087 Selenicereus undatus HOM05D001137 ORTHO05D001967 4.9e-06 55.5 49 55.1
Zm00001eb211150 Zea mays HOM05D001137 ORTHO05D001967 4.9e-06 55.5 47 55.3
MELO3C004231.2 Cucumis melo HOM05D001137 ORTHO05D001967 6.4e-06 55.1 36 66.7
CsaV3_2G006540 Cucumis sativus L. HOM05D001137 ORTHO05D001967 6.4e-06 55.1 36 66.7
Migut.N01989 Erythranthe guttata HOM05D001137 ORTHO05D001967 6.4e-06 55.1 36 66.7
Hma1.2p1_0208F.1_g088270 Hydrangea macrophylla HOM05D001137 ORTHO05D001967 6.4e-06 55.1 39 64.1
Lj5A442G8 Lonicera japonica HOM05D001137 ORTHO05D001967 6.4e-06 55.1 50 54.0
PGR083G1814 Punica granatum HOM05D001137 ORTHO05D001967 6.4e-06 55.1 49 53.1
Sed0022056 Sechium edule HOM05D001137 ORTHO05D001967 6.4e-06 55.1 36 66.7
Zm00001eb063690 Zea mays HOM05D001137 ORTHO05D001967 6.4e-06 55.1 47 55.3
Actinidia05688 Actinidia chinensis HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
ATR0706G044 Amborella trichopoda HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
CANSAT54G2339 Cannabis sativa HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Cfa006613 Carpinus fangiana HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Ciclev10000504m.g Citrus clementina HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Cc00_g26630 Coffea canephora HOM05D001137 ORTHO05D001967 8.3e-06 54.7 76 38.2
COL.COLO4_10493 Corchorus olitorius HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Haze_04162 Corylus avellana HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
DCAR_029395 Daucus carota HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Dinv30786 Davidia involucrata HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Dinv40308 Davidia involucrata HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Eucgr.B01931 Eucalyptus grandis HOM05D001137 ORTHO05D001967 8.3e-06 54.7 49 53.1
Manes.09G169100 Manihot esculenta HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Nn5g30054 Nelumbo nucifera HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Nitab4.5_0002344g0120 Nicotiana tabacum HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Nitab4.5_0004754g0030 Nicotiana tabacum HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Oeu012110.2 Olea europaea HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
PSO210G3549 Papaver somniferum HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
PSO832G3296 Papaver somniferum HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Peaxi162Scf00037g00923 Petunia axillaris HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Potri.013G018800 Populus trichocarpa HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Sed0004131 Sechium edule HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Sc09g0003040 Simmondsia chinensis HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
Thecc.05G311100 Theobroma cacao HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
TAR633G1242 Trochodendron aralioides HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
vmacro04982 Vaccinium macrocarpon HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7
GSVIVG01031116001 Vitis vinifera HOM05D001137 ORTHO05D001967 8.3e-06 54.7 36 66.7


User provided reference genes

Program Settings