Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 1.1e-118 430.6 353 100.0
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 1.7e-26 124.4 136 53.7
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.1e-25 121.7 179 45.8
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.8e-24 117.1 212 41.5
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 8.1e-24 115.5 129 55.0
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.4e-23 114.8 129 54.3
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.2e-22 111.7 116 53.4
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 9.9e-22 108.6 124 53.2
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 9.9e-22 108.6 129 51.2
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 2.2e-21 107.5 132 50.0
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 2.2e-21 107.5 164 46.3
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 3.7e-21 106.7 145 46.9
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 3.7e-21 106.7 129 53.5
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 4.9e-21 106.3 166 45.8
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 6.4e-21 105.9 172 43.6
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 6.4e-21 105.9 173 41.0
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 6.4e-21 105.9 147 46.9
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 6.4e-21 105.9 147 46.9
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 8.3e-21 105.5 144 46.5
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 1.9e-20 104.4 168 43.5
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 1.9e-20 104.4 174 43.7
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 2.4e-20 104.0 166 42.8
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 2.4e-20 104.0 154 46.1
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.2e-20 103.6 130 50.0
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.2e-20 103.6 191 40.8
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 7.1e-20 102.4 142 47.2
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 9.2e-20 102.1 181 40.9
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 1.2e-19 101.7 132 48.5
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.2e-19 101.7 143 50.3
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.2e-19 101.7 173 43.9
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.2e-19 101.7 145 46.9
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.2e-19 101.7 144 49.3
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.2e-19 101.7 133 46.6
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.6e-19 101.3 144 45.8
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 1.6e-19 101.3 176 44.9
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 2.1e-19 100.9 130 51.5
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 2.1e-19 100.9 173 43.4
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 2.1e-19 100.9 170 44.1
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 2.7e-19 100.5 212 40.6
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 2.7e-19 100.5 117 50.4
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 2.7e-19 100.5 207 41.1
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 3.5e-19 100.1 147 46.3
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 4.6e-19 99.8 156 44.2
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 4.6e-19 99.8 199 39.2
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 4.6e-19 99.8 185 38.9
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 7.8e-19 99.0 166 42.8
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.0e-18 98.6 176 44.3
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.0e-18 98.6 175 43.4
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 1.3e-18 98.2 175 43.4
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.3e-18 98.2 177 45.2
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.7e-18 97.8 216 38.0
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 3.0e-18 97.1 172 41.3
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 3.0e-18 97.1 156 46.2
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 3.9e-18 96.7 174 40.8
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 5.1e-18 96.3 149 45.6
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 5.1e-18 96.3 177 42.9
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 6.6e-18 95.9 211 37.9
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 6.6e-18 95.9 192 39.1
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.1e-17 95.1 169 40.8
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.1e-17 95.1 175 40.6
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 1.5e-17 94.7 134 45.5
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.9e-17 94.4 166 41.0
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.5e-17 94.0 198 37.9
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 3.3e-17 93.6 201 37.3
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 5.6e-17 92.8 166 42.2
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 7.3e-17 92.4 203 41.4
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 7.3e-17 92.4 219 37.4
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 7.3e-17 92.4 175 39.4
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 9.5e-17 92.0 134 44.8
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 9.5e-17 92.0 203 41.4
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 1.6e-16 91.3 171 40.9
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 2.1e-16 90.9 181 39.8
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 4.7e-16 89.7 175 41.7
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 6.2e-16 89.4 116 46.6
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 8.1e-16 89.0 199 37.2
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 1.1e-15 88.6 175 39.4
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.4e-15 88.2 153 41.2
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 2.0e-14 84.3 181 38.1
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 5.8e-14 82.8 154 42.9
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 9.9e-14 82.0 129 43.4
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.3e-13 81.6 129 44.2
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 2.2e-13 80.9 237 33.3
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 8.4e-13 79.0 151 40.4
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 7.8e-11 72.4 73 52.1
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.1e-09 68.6 126 42.1
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 1.9e-09 67.8 116 38.8
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 2.5e-09 67.4 118 40.7
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 3.3e-09 67.0 121 43.0
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 3.3e-09 67.0 120 40.8
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 5.6e-09 66.2 85 50.6
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 5.6e-09 66.2 79 49.4
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 7.3e-09 65.9 76 48.7
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 9.6e-09 65.5 102 44.1
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 9.6e-09 65.5 103 40.8
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.2e-08 65.1 144 36.8
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 1.6e-08 64.7 116 39.7
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 2.8e-08 63.9 116 39.7
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 8.1e-08 62.4 78 50.0
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 8.1e-08 62.4 112 42.9
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 1.1e-07 62.0 140 35.0
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.1e-07 62.0 119 42.9
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 1.4e-07 61.6 147 34.7
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.8e-07 61.2 159 34.6
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 3.1e-07 60.5 139 34.5
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 3.1e-07 60.5 104 41.3
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 4.0e-07 60.1 115 38.3
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.0e-06 57.8 63 47.6
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 2.0e-06 57.8 80 42.5
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.0e-06 57.8 113 36.3
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 3.4e-06 57.0 152 33.6
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 3.4e-06 57.0 152 33.6


User provided reference genes

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