Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 7.6e-46 186.8 94 100.0
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 3.1e-31 138.3 93 74.2
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 9.0e-31 136.7 91 75.8
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 1.5e-30 136.0 94 71.3
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 2.6e-30 135.2 94 71.3
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 2.6e-30 135.2 94 70.2
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 4.5e-30 134.4 93 73.1
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 4.5e-30 134.4 84 77.4
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 4.5e-30 134.4 86 75.6
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 5.8e-30 134.0 94 70.2
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 7.6e-30 133.7 94 68.1
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 1.3e-29 132.9 94 68.1
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 1.3e-29 132.9 94 68.1
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.7e-29 132.5 94 68.1
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 2.2e-29 132.1 94 69.1
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 3.8e-29 131.3 83 75.9
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 3.8e-29 131.3 94 68.1
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.8e-29 131.3 94 70.2
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.8e-29 131.3 94 70.2
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 3.8e-29 131.3 94 70.2
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 3.8e-29 131.3 83 74.7
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 4.9e-29 131.0 94 70.2
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 4.9e-29 131.0 83 75.9
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 4.9e-29 131.0 83 75.9
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 4.9e-29 131.0 94 68.1
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 4.9e-29 131.0 94 69.1
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 6.4e-29 130.6 92 71.7
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 6.4e-29 130.6 94 67.0
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 6.4e-29 130.6 94 69.1
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 6.4e-29 130.6 94 69.1
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 6.4e-29 130.6 94 66.0
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 6.4e-29 130.6 94 69.1
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 6.4e-29 130.6 94 68.1
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 8.4e-29 130.2 94 67.0
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 8.4e-29 130.2 94 69.1
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 8.4e-29 130.2 94 69.1
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 8.4e-29 130.2 94 67.0
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 8.4e-29 130.2 91 68.1
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 1.1e-28 129.8 94 69.1
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 1.4e-28 129.4 83 74.7
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 1.4e-28 129.4 94 68.1
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.4e-28 129.4 83 74.7
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.4e-28 129.4 89 70.8
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.9e-28 129.0 93 68.8
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 1.9e-28 129.0 89 70.8
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.5e-28 128.6 94 64.9
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 2.5e-28 128.6 94 68.1
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 2.5e-28 128.6 94 67.0
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 2.5e-28 128.6 83 74.7
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 3.2e-28 128.3 93 67.7
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 3.2e-28 128.3 93 67.7
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 3.2e-28 128.3 83 74.7
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 5.5e-28 127.5 83 73.5
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 5.5e-28 127.5 83 72.3
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 9.3e-28 126.7 81 76.5
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 9.3e-28 126.7 83 73.5
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 9.3e-28 126.7 83 73.5
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 9.3e-28 126.7 94 63.8
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.2e-27 126.3 92 68.5
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.2e-27 126.3 83 73.5
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 1.6e-27 125.9 91 67.0
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 1.6e-27 125.9 94 66.0
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.6e-27 125.9 81 74.1
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 2.1e-27 125.6 92 69.6
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 2.1e-27 125.6 92 67.4
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 2.1e-27 125.6 92 68.5
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 2.1e-27 125.6 80 73.8
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 2.1e-27 125.6 83 73.5
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 2.7e-27 125.2 87 72.4
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 2.7e-27 125.2 83 69.9
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 3.5e-27 124.8 79 75.9
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 4.6e-27 124.4 94 62.8
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 6.0e-27 124.0 92 67.4
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 7.9e-27 123.6 82 72.0
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 7.9e-27 123.6 81 72.8
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.0e-26 123.2 81 71.6
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.8e-26 122.5 83 69.9
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.8e-26 122.5 89 66.3
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.8e-26 122.5 92 66.3
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 6.7e-26 120.6 92 66.3
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.5e-25 119.4 90 66.7
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 1.5e-25 119.4 90 64.4
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 1.5e-25 119.4 90 64.4
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 1.9e-25 119.0 101 62.4
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 1.9e-25 119.0 86 69.8
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 4.3e-25 117.9 90 64.4
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 7.4e-25 117.1 79 70.9
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 7.4e-25 117.1 88 65.9
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 3.7e-24 114.8 79 68.4
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 3.7e-24 114.8 79 68.4
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 3.7e-24 114.8 79 68.4
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 3.7e-24 114.8 79 68.4
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.1e-23 113.2 79 67.1
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 3.1e-23 111.7 82 69.5
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 3.1e-23 111.7 88 62.5
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.6e-22 108.6 80 66.2
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 4.5e-22 107.8 159 42.1
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 4.5e-22 107.8 77 70.1
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 1.3e-21 106.3 95 58.9
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 1.3e-21 106.3 74 70.3
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 2.2e-21 105.5 72 70.8
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 2.9e-21 105.1 72 70.8
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 2.9e-21 105.1 71 74.6
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 4.9e-21 104.4 66 77.3
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 1.1e-20 103.2 72 72.2
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 3.2e-20 101.7 72 66.7
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 9.3e-20 100.1 61 75.4
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.1e-19 99.0 61 72.1
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 3.5e-19 98.2 61 78.7
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 6.0e-19 97.4 72 62.5
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.3e-18 96.3 59 72.9
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 2.3e-18 95.5 72 63.9
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 9.7e-17 90.1 74 62.2
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 2.8e-16 88.6 79 54.4
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 4.8e-16 87.8 107 50.5
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 1.2e-14 83.2 79 54.4
Cre08.g385900 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 1.2e-06 56.6 68 41.2


User provided reference genes

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