Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO351G0353 Selaginella moellendorffii HOM05D000928 ORTHO05D002280 0.0e+00 1101.3 582 100.0
Pp3c18_11090 Physcomitrium patens HOM05D000928 ORTHO05D000023 1.3e-31 142.1 453 25.4
Pp3c19_18360 Physcomitrium patens HOM05D000928 ORTHO05D000023 4.3e-30 137.1 561 24.2
Migut.D00415 Erythranthe guttata HOM05D000928 ORTHO05D000023 1.4e-25 122.1 599 24.0
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 9.2e-25 119.4 385 25.5
TAR362G0945 Trochodendron aralioides HOM05D000928 ORTHO05D000023 7.8e-24 116.3 456 24.3
MSTRG.21500 Avicennia marina HOM05D000928 ORTHO05D000023 1.0e-23 115.9 443 24.6
CsaV3_7G027390 Cucumis sativus L. HOM05D000928 ORTHO05D000023 3.0e-23 114.4 468 24.1
MELO3C015740.2 Cucumis melo HOM05D000928 ORTHO05D000023 6.6e-23 113.2 456 23.9
AUR62024728 Chenopodium quinoa HOM05D000928 ORTHO05D000023 1.5e-22 112.1 353 25.5
ClCG09G007750 Citrullus lanatus HOM05D000928 ORTHO05D000023 1.9e-22 111.7 531 23.0
PSO384G4222 Papaver somniferum HOM05D000928 ORTHO05D000023 2.5e-22 111.3 519 23.3
SMO347G0244 Selaginella moellendorffii HOM05D002316 ORTHO05D002280 3.3e-22 110.9 120 44.2
TWI12G0138 Tripterygium wilfordii HOM05D000928 ORTHO05D000023 7.3e-22 109.8 487 25.1
Carub.0004s1252 Capsella rubella HOM05D000928 ORTHO05D000023 2.1e-21 108.2 502 24.3
CARHR124840 Cardamine hirsuta HOM05D000928 ORTHO05D000023 2.1e-21 108.2 410 24.1
Cpa.g.sc50.32 Carica papaya HOM05D000928 ORTHO05D000023 2.1e-21 108.2 540 24.1
A04p24080 Brassica napus HOM05D000928 ORTHO05D000023 3.6e-21 107.5 387 24.0
Sed0008055 Sechium edule HOM05D000928 ORTHO05D000023 3.6e-21 107.5 506 22.3
HPP92_028102 Vanilla planifolia HOM05D000928 ORTHO05D000023 3.6e-21 107.5 452 24.1
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 4.7e-21 107.1 430 24.0
AUR62011887 Chenopodium quinoa HOM05D000928 ORTHO05D000023 4.7e-21 107.1 383 23.8
MBI18_g15331_MAGBIO Magnolia biondii HOM05D000928 ORTHO05D000023 4.7e-21 107.1 372 23.7
ATR0680G125 Amborella trichopoda HOM05D000928 ORTHO05D000023 6.2e-21 106.7 553 22.1
QL09p038262 Quercus lobata HOM05D000928 ORTHO05D000023 8.1e-21 106.3 524 22.9
SEGI_25335 Sequoiadendron giganteum HOM05D000928 ORTHO05D000023 1.1e-20 105.9 507 24.1
BcaB06g28434 Brassica carinata HOM05D000928 ORTHO05D000023 1.4e-20 105.5 402 23.4
THA.LOC104800874 Tarenaya hassleriana HOM05D000928 ORTHO05D000023 1.4e-20 105.5 461 24.3
BraA04t17927Z Brassica rapa HOM05D000928 ORTHO05D000023 1.8e-20 105.1 387 23.5
Rhsim01G0265200 Rhododendron simsii HOM05D000928 ORTHO05D000023 1.8e-20 105.1 486 24.3
Ciclev10019294m.g Citrus clementina HOM05D000928 ORTHO05D000023 3.1e-20 104.4 503 23.5
Sp4g13730 Schrenkiella parvula HOM05D000928 ORTHO05D000023 3.1e-20 104.4 512 23.4
C04p60760 Brassica napus HOM05D000928 ORTHO05D000023 4.0e-20 104.0 402 23.9
Lsat_1_v5_gn_9_8701 Lactuca sativa HOM05D000928 ORTHO05D000023 4.0e-20 104.0 539 23.6
Potri.005G222900 Populus trichocarpa HOM05D000928 ORTHO05D000023 5.2e-20 103.6 504 24.0
Nitab4.5_0000086g0120 Nicotiana tabacum HOM05D000928 ORTHO05D000023 6.8e-20 103.2 449 24.5
vmacro14840 Vaccinium macrocarpon HOM05D000928 ORTHO05D000023 6.8e-20 103.2 377 23.6
AT2G31240 Arabidopsis thaliana HOM05D000928 ORTHO05D000023 8.9e-20 102.8 502 23.9
BcaB06g28519 Brassica carinata HOM05D000928 ORTHO05D000023 8.9e-20 102.8 405 23.7
Cc01_g18440 Coffea canephora HOM05D000928 ORTHO05D000023 8.9e-20 102.8 485 23.7
Nitab4.5_0005119g0010 Nicotiana tabacum HOM05D000928 ORTHO05D000023 8.9e-20 102.8 449 24.9
RcHm_v2.0_Chr6g0288381 Rosa chinensis HOM05D000928 ORTHO05D000023 8.9e-20 102.8 540 21.3
BolC4t27567H Brassica oleracea HOM05D000928 ORTHO05D000023 1.2e-19 102.4 405 23.7
Lj2A1153T50 Lonicera japonica HOM05D000928 ORTHO05D000023 1.2e-19 102.4 494 24.7
TWI18G0710 Tripterygium wilfordii HOM05D000928 ORTHO05D000023 1.2e-19 102.4 465 23.2
Peaxi162Scf00134g00614 Petunia axillaris HOM05D000928 ORTHO05D000023 1.5e-19 102.1 463 23.1
COL.COLO4_05174 Corchorus olitorius HOM05D000928 ORTHO05D000023 2.0e-19 101.7 413 24.0
CiPaw.04G185800 Carya illinoinensis HOM05D000928 ORTHO05D000023 2.6e-19 101.3 497 24.3
ECA247G3729 Erigeron canadensis HOM05D000928 ORTHO05D000023 2.6e-19 101.3 372 22.8
Aa31LG7G10140 Aethionema arabicum HOM05D000928 ORTHO05D001186 3.4e-19 100.9 503 22.1
Aqoxy1G01844 Aquilegia oxysepala HOM05D000928 ORTHO05D000023 3.4e-19 100.9 338 22.5
HanXRQChr10g0281051 Helianthus annuus HOM05D000928 ORTHO05D000023 3.4e-19 100.9 327 23.2
EL10Ac5g10413 Beta vulgaris HOM05D000928 ORTHO05D000023 4.4e-19 100.5 466 23.6
Cfa002412 Carpinus fangiana HOM05D000928 ORTHO05D000023 4.4e-19 100.5 509 22.6
Duzib138G0579 Durio zibethinus HOM05D000928 ORTHO05D000023 5.8e-19 100.1 543 23.6
Solyc09g066290.3 Solanum lycopersicum HOM05D000928 ORTHO05D000023 5.8e-19 100.1 402 23.9
TPR.G3579 Trifolium pratense HOM05D000928 ORTHO05D000023 5.8e-19 100.1 395 23.0
CDE06G2473 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 7.5e-19 99.8 328 24.1
Gorai.007G145300 Gossypium raimondii HOM05D000928 ORTHO05D000023 7.5e-19 99.8 514 23.9
VMungo0720G2989 Vigna mungo HOM05D000928 ORTHO05D000023 7.5e-19 99.8 420 23.3
Sopen09g027990 Solanum pennellii HOM05D000928 ORTHO05D000023 9.9e-19 99.4 402 23.9
Sabra05G0171600 Salix brachista HOM05D000928 ORTHO05D000023 1.3e-18 99.0 504 22.8
Oeu039682.1 Olea europaea HOM05D000928 ORTHO05D000023 2.9e-18 97.8 489 23.1
PGSC0003DMG400009714 Solanum tuberosum HOM05D000928 ORTHO05D000023 2.9e-18 97.8 385 23.4
Gohir.D11G135700 Gossypium hirsutum HOM05D000928 ORTHO05D000023 3.7e-18 97.4 514 23.7
Os02g0820300 Oryza sativa ssp. japonica HOM05D000928 ORTHO05D000023 3.7e-18 97.4 354 24.6
Zm00001eb191190 Zea mays HOM05D000928 ORTHO05D000023 4.9e-18 97.1 416 23.6
CAN.G977.2 Capsicum annuum HOM05D000928 ORTHO05D000023 6.4e-18 96.7 414 22.9
Eucgr.K03268 Eucalyptus grandis HOM05D000928 ORTHO05D000023 6.4e-18 96.7 490 23.7
DCAR_012535 Daucus carota HOM05D000928 ORTHO05D000023 8.3e-18 96.3 528 22.3
Dinv34612 Davidia involucrata HOM05D000928 ORTHO05D000023 8.3e-18 96.3 494 22.5
Glyma.10G035900 Glycine max HOM05D000928 ORTHO05D000023 8.3e-18 96.3 459 22.9
Glyma.13G122300 Glycine max HOM05D000928 ORTHO05D000023 1.1e-17 95.9 417 22.8
Medtr1g070145 Medicago truncatula HOM05D000928 ORTHO05D000023 1.1e-17 95.9 464 22.6
Psat6g055360 Pisum sativum HOM05D000928 ORTHO05D000023 1.1e-17 95.9 376 23.4
Ca_09688_v3 Cicer arietinum L. HOM05D000928 ORTHO05D000023 1.4e-17 95.5 401 22.4
Gohir.A11G130000 Gossypium hirsutum HOM05D000928 ORTHO05D000023 1.9e-17 95.1 514 23.0
SHI09819 Sapria himalayana HOM05D000928 ORTHO05D000023 1.9e-17 95.1 341 23.5
Lj5g0008005 Lotus japonicus HOM05D000928 ORTHO05D000023 3.2e-17 94.4 451 22.2
Lalb_Chr21g0313821 Lupinus albus HOM05D000928 ORTHO05D000023 4.1e-17 94.0 385 22.6
AL4G26460 Arabidopsis lyrata HOM05D000928 ORTHO05D000023 5.4e-17 93.6 508 23.2
EL10Ac4g08577 Beta vulgaris HOM05D000928 ORTHO05D001186 5.4e-17 93.6 434 23.0
Dinv22415 Davidia involucrata HOM05D000928 ORTHO05D000023 5.4e-17 93.6 373 23.1
TAR633G0595 Trochodendron aralioides HOM05D000928 ORTHO05D000023 9.2e-17 92.8 330 23.0
Manes.13G032900 Manihot esculenta HOM05D000928 ORTHO05D000023 3.5e-16 90.9 292 24.0
CDE06G0714 Ceratophyllum demersum HOM05D000928 ORTHO05D001186 7.8e-16 89.7 453 22.7
CDE06G1208 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 1.0e-15 89.4 547 23.4
Haze_24611 Corylus avellana HOM05D000928 ORTHO05D000023 2.3e-15 88.2 298 22.8
TAR633G2766 Trochodendron aralioides HOM05D000928 ORTHO05D000023 3.9e-15 87.4 425 22.4
Hund09597 Selenicereus undatus HOM05D000928 ORTHO05D000023 8.6e-15 86.3 542 21.8
Lj4g0018991 Lotus japonicus HOM05D000928 ORTHO05D001186 1.5e-14 85.5 519 20.6
FvH4_2g21700 Fragaria vesca HOM05D000928 ORTHO05D000023 1.9e-14 85.1 289 23.2
FAN24G1393 Fragaria x ananassa HOM05D000928 ORTHO05D000023 1.9e-14 85.1 289 23.2
THA.LOC104824977 Tarenaya hassleriana HOM05D000928 ORTHO05D001186 1.9e-14 85.1 399 20.6
Thecc.01G260200 Theobroma cacao HOM05D000928 ORTHO05D000023 2.5e-14 84.7 449 22.3
arahy.Tifrunner.gnm1.ann1.6R2DR5 Arachis hypogaea HOM05D000928 ORTHO05D000023 3.3e-14 84.3 289 23.2
arahy.Tifrunner.gnm1.ann1.VXR6Q5 Arachis hypogaea HOM05D000928 ORTHO05D000023 3.3e-14 84.3 289 23.2
Gohir.A08G189400 Gossypium hirsutum HOM05D000928 ORTHO05D000023 4.3e-14 84.0 342 22.5
THA.LOC104824978 Tarenaya hassleriana HOM05D000928 ORTHO05D001186 4.3e-14 84.0 392 20.4
GSVIVG01028305001 Vitis vinifera HOM05D000928 ORTHO05D000023 5.6e-14 83.6 302 25.5
Actinidia33063 Actinidia chinensis HOM05D000928 ORTHO05D001186 9.5e-14 82.8 601 20.6
TPR.G37537 Trifolium pratense HOM05D000928 ORTHO05D001186 2.1e-13 81.6 425 19.5
ECA238G3827 Erigeron canadensis HOM05D000928 ORTHO05D001186 2.8e-13 81.3 418 20.6
HanXRQChr14g0450301 Helianthus annuus HOM05D000928 ORTHO05D001186 2.8e-13 81.3 435 20.9
SalBow4G0137 Salvia bowleyana HOM05D000928 ORTHO05D000023 2.8e-13 81.3 504 19.8
unitig_899.g15491 Utricularia gibba HOM05D000928 ORTHO05D001186 3.6e-13 80.9 422 20.9
unitig_0.g152 Utricularia gibba HOM05D000928 ORTHO05D000023 6.2e-13 80.1 363 22.9
Pp3c2_6340 Physcomitrium patens HOM05D000928 ORTHO05D001186 1.1e-12 79.3 343 24.2
Aqoxy7G03339 Aquilegia oxysepala HOM05D000928 ORTHO05D000023 2.4e-12 78.2 391 22.0
ECA232G3816 Erigeron canadensis HOM05D000928 ORTHO05D001186 2.4e-12 78.2 445 20.9
HanXRQChr16g0504001 Helianthus annuus HOM05D000928 ORTHO05D001186 2.4e-12 78.2 570 19.8
Psat4g057840 Pisum sativum HOM05D000928 ORTHO05D001186 3.1e-12 77.8 525 20.6
Ah.11g049660 Amaranthus hybridus HOM05D000928 ORTHO05D000023 4.0e-12 77.4 249 22.1
Atru.chr5.1649 Acer truncatum HOM05D000928 ORTHO05D000023 5.2e-12 77.0 284 21.8
FAN27G2497 Fragaria x ananassa HOM05D000928 ORTHO05D000023 5.2e-12 77.0 284 22.2
Lsat_1_v5_gn_4_75360 Lactuca sativa HOM05D000928 ORTHO05D001186 1.2e-11 75.9 456 20.2
SGA_v2.0_scaffold7G04132 Striga asiatica HOM05D000928 ORTHO05D001186 1.2e-11 75.9 392 20.2
CDE02G2275 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 3.4e-11 74.3 357 23.0
ECA246G1079 Erigeron canadensis HOM05D000928 ORTHO05D001186 4.4e-11 73.9 411 20.4
TWI81G0742 Tripterygium wilfordii HOM05D000928 ORTHO05D001186 4.4e-11 73.9 340 22.9
Pp3c1_30970 Physcomitrium patens HOM05D000928 ORTHO05D001186 5.8e-11 73.6 432 22.7
VMungo0331G1848 Vigna mungo HOM05D000928 ORTHO05D001186 9.9e-11 72.8 344 21.2
Medtr4g106900 Medicago truncatula HOM05D000928 ORTHO05D001186 1.3e-10 72.4 428 20.3
FAN15G1834 Fragaria x ananassa HOM05D000928 ORTHO05D000023 2.2e-10 71.6 581 19.3
Lsat_1_v5_gn_0_19300 Lactuca sativa HOM05D000928 ORTHO05D001186 3.8e-10 70.9 422 22.0
Oeu055024.1 Olea europaea HOM05D000928 ORTHO05D001186 3.8e-10 70.9 339 21.5
Phvul.010G115100 Phaseolus vulgaris HOM05D000928 ORTHO05D001186 1.9e-09 68.6 434 19.4
Haze_24610 Corylus avellana HOM05D000928 ORTHO05D000023 6.0e-08 63.5 335 21.5
ATR0730G205 Amborella trichopoda HOM05D000928 ORTHO05D001186 7.8e-08 63.2 435 21.4
Nn1g02726 Nelumbo nucifera HOM05D000928 ORTHO05D000023 2.5e-06 58.2 374 21.9
Cfa002415 Carpinus fangiana HOM05D000928 ORTHO05D000023 5.6e-06 57.0 271 21.8
SMO174G0182 Selaginella moellendorffii HOM05D000928 ORTHO05D001186 7.3e-06 56.6 397 21.4


User provided reference genes

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