Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 6.0e-261 903.7 464 100.0
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 7.5e-70 268.9 458 35.2
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 2.0e-67 260.8 463 36.1
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 3.5e-67 260.0 461 36.4
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 1.0e-66 258.5 472 34.1
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 2.3e-66 257.3 479 35.9
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 2.3e-66 257.3 476 36.6
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 2.3e-66 257.3 468 36.8
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 1.5e-65 254.6 463 35.6
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 3.3e-65 253.4 537 35.6
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 4.3e-65 253.1 479 36.7
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 4.3e-65 253.1 456 34.0
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 4.3e-65 253.1 456 33.1
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 7.3e-65 252.3 477 34.8
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 1.6e-64 251.1 475 36.0
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 6.1e-64 249.2 465 37.2
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 8.0e-64 248.8 475 37.9
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 1.8e-63 247.7 481 34.5
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 3.0e-63 246.9 472 34.7
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 3.0e-63 246.9 476 35.9
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 4.0e-63 246.5 477 36.1
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 5.2e-63 246.1 478 35.4
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 5.2e-63 246.1 472 35.0
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 5.2e-63 246.1 473 35.7
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 1.2e-62 245.0 465 34.8
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 1.2e-62 245.0 472 34.5
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.5e-62 244.6 469 35.0
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 1.5e-62 244.6 471 34.8
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 1.5e-62 244.6 472 33.5
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 2.0e-62 244.2 477 34.8
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 2.6e-62 243.8 475 34.7
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 2.6e-62 243.8 476 34.9
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 3.4e-62 243.4 482 32.8
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 4.4e-62 243.0 476 35.5
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 5.7e-62 242.7 467 36.0
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 5.7e-62 242.7 481 34.5
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 9.8e-62 241.9 478 33.7
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 9.8e-62 241.9 473 35.7
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 9.8e-62 241.9 474 34.0
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 9.8e-62 241.9 470 35.3
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 1.3e-61 241.5 465 34.6
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 1.3e-61 241.5 481 35.1
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 1.7e-61 241.1 471 35.5
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 2.2e-61 240.7 480 34.0
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 2.9e-61 240.4 484 34.1
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 4.9e-61 239.6 475 32.8
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 8.3e-61 238.8 474 34.4
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 1.1e-60 238.4 482 34.0
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 2.4e-60 237.3 478 33.9
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 4.1e-60 236.5 473 34.0
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 5.4e-60 236.1 478 34.3
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 5.4e-60 236.1 475 33.9
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 9.2e-60 235.3 478 33.5
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 9.2e-60 235.3 488 33.2
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 1.2e-59 235.0 470 34.3
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 1.2e-59 235.0 472 33.1
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 1.2e-59 235.0 478 32.6
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 1.6e-59 234.6 475 33.9
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 2.0e-59 234.2 471 33.1
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 2.0e-59 234.2 471 33.1
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.0e-59 234.2 478 33.3
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 2.0e-59 234.2 478 33.7
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 5.9e-59 232.6 488 34.0
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 2.3e-58 230.7 495 34.3
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 3.9e-58 229.9 475 32.0
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 5.0e-58 229.6 474 33.8
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 8.6e-58 228.8 466 33.0
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.1e-57 228.4 475 32.6
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 1.5e-57 228.0 480 32.7
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 1.5e-57 228.0 477 32.5
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 4.3e-57 226.5 461 33.8
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 4.3e-57 226.5 481 33.1
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 5.6e-57 226.1 482 32.8
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 1.2e-56 224.9 473 31.5
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 1.6e-56 224.6 480 33.1
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 1.6e-56 224.6 474 33.3
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 3.6e-56 223.4 474 32.7
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 4.7e-56 223.0 473 33.2
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 6.2e-56 222.6 475 33.1
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 1.0e-55 221.9 472 33.5
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 1.0e-55 221.9 485 32.6
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 1.4e-55 221.5 496 32.9
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.8e-55 221.1 482 32.2
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 2.3e-55 220.7 482 32.2
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 3.1e-55 220.3 466 33.0
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 6.8e-55 219.2 436 34.9
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 1.2e-54 218.4 436 34.9
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.5e-54 218.0 472 33.3
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 2.0e-54 217.6 596 29.5
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 2.6e-54 217.2 474 33.5
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.4e-54 216.9 472 33.3
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.4e-54 216.5 474 33.3
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 5.8e-54 216.1 509 31.8
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 5.8e-54 216.1 475 33.1
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 5.8e-54 216.1 474 32.7
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 7.5e-54 215.7 472 33.3
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 7.5e-54 215.7 486 32.7
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.7e-53 214.5 474 32.7
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 1.7e-53 214.5 478 35.8
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 2.2e-53 214.2 378 36.2
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 2.9e-53 213.8 482 33.0
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 8.3e-53 212.2 475 32.8
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 1.1e-52 211.8 464 31.7
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.4e-52 210.7 474 32.3
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 2.0e-51 207.6 510 30.6
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 2.7e-51 207.2 459 32.2
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 4.6e-51 206.5 475 35.4
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.0e-50 205.3 427 35.4
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 3.0e-50 203.8 466 32.4
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 1.5e-49 201.4 401 34.4
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 2.5e-49 200.7 383 34.7
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 7.3e-49 199.1 466 32.0
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 6.2e-48 196.1 377 33.2
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 3.4e-46 190.3 417 31.7
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 1.1e-44 185.3 475 30.5
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 1.0e-42 178.7 427 31.1
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 1.5e-41 174.9 639 27.5
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 5.6e-41 172.9 481 29.5
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 3.6e-40 170.2 300 35.7
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 4.7e-40 169.9 473 30.0
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 6.2e-40 169.5 300 35.0
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 1.1e-39 168.7 422 30.6
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 1.8e-39 167.9 300 35.3
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 1.2e-38 165.2 469 29.6
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.3e-37 161.8 373 34.3
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 3.8e-37 160.2 459 28.5
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 5.4e-36 156.4 391 31.7
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 9.2e-36 155.6 332 33.1
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 1.7e-34 151.4 361 32.1
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 1.5e-33 148.3 259 35.9
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.6e-32 144.8 370 29.7
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 2.6e-30 137.5 358 29.1
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.4e-30 136.7 434 28.1
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 1.7e-29 134.8 403 27.5
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 1.9e-28 131.3 159 44.0
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 3.2e-28 130.6 165 46.1
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 4.6e-27 126.7 195 40.5
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 6.6e-26 122.9 278 31.3
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 2.4e-23 114.4 179 39.1
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 4.5e-22 110.2 464 26.1
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 5.8e-22 109.8 282 30.5
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 3.8e-21 107.1 296 27.4
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 8.4e-21 105.9 209 31.1
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 3.2e-20 104.0 394 25.9
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 7.1e-20 102.8 219 30.1
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 3.5e-19 100.5 205 33.7
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 5.1e-18 96.7 509 25.7
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 6.7e-18 96.3 223 33.6
Sopen04g024480 Solanum pennellii HOM05D001952 ORTHO05D004913 2.1e-16 91.3 88 48.9
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 2.8e-16 90.9 285 27.4
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 4.8e-16 90.1 100 47.0
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 1.1e-15 89.0 256 30.5
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 5.3e-15 86.7 148 37.2
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 4.5e-14 83.6 170 32.9
Cre08.g374300 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D004913 5.8e-14 83.2 158 35.4
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 9.9e-14 82.4 121 35.5
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 1.3e-13 82.0 121 35.5
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.4e-12 78.6 95 45.3
MCO07G121 Micromonas commoda HOM05D001952 ORTHO05D004913 2.3e-10 71.2 176 32.4
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 1.5e-09 68.6 124 36.3
TPR.G23686 Trifolium pratense HOM05D001952 ORTHO05D012360 4.3e-09 67.0 168 27.4
Oeu061480.1 Olea europaea HOM05D001952 ORTHO05D004913 3.1e-07 60.8 42 57.1
Cfa025427 Carpinus fangiana HOM05D000553 ORTHO05D125085 1.5e-06 58.5 130 29.2
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 1.0e-05 55.8 116 31.9


User provided reference genes

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