Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO348G0048 Selaginella moellendorffii HOM05D006451 ORTHO05D007680 1.5e-133 479.6 244 100.0
ATR0665G102 Amborella trichopoda HOM05D006451 ORTHO05D007680 5.9e-66 255.0 246 52.4
Mapoly0182s0013 Marchantia polymorpha HOM05D006451 ORTHO05D007680 2.5e-64 249.6 247 52.2
QL06p001354 Quercus lobata HOM05D006451 ORTHO05D007680 1.2e-63 247.3 247 53.0
AagrBONN_evm.TU.Sc2ySwM_362.195 Anthoceros agrestis HOM05D006451 ORTHO05D007680 1.8e-62 243.4 231 53.7
Gohir.D01G021900 Gossypium hirsutum HOM05D006451 ORTHO05D007680 2.3e-62 243.0 247 53.0
Gohir.A01G023900 Gossypium hirsutum HOM05D006451 ORTHO05D007680 3.9e-62 242.3 247 52.6
Gorai.002G024400 Gossypium raimondii HOM05D006451 ORTHO05D007680 6.7e-62 241.5 247 52.6
Lj6g0024617 Lotus japonicus HOM05D006451 ORTHO05D007680 9.7e-61 237.7 248 51.6
Oeu058962.1 Olea europaea HOM05D006451 ORTHO05D007680 1.3e-60 237.3 247 50.2
Manes.15G032000 Manihot esculenta HOM05D006451 ORTHO05D007680 1.7e-60 236.9 245 50.2
GSVIVG01018026001 Vitis vinifera HOM05D006451 ORTHO05D007680 1.7e-60 236.9 245 50.2
Manes.03G174100 Manihot esculenta HOM05D006451 ORTHO05D007680 2.2e-60 236.5 249 51.8
Sc25g0004270 Simmondsia chinensis HOM05D006451 ORTHO05D007680 2.8e-60 236.1 247 50.2
Duzib052G1229 Durio zibethinus HOM05D006451 ORTHO05D007680 3.7e-60 235.7 245 51.4
Cc03_g04170 Coffea canephora HOM05D006451 ORTHO05D007680 4.8e-60 235.3 247 49.8
COL.COLO4_21546 Corchorus olitorius HOM05D006451 ORTHO05D007680 1.1e-59 234.2 245 51.8
Atru.chr4.2375 Acer truncatum HOM05D006451 ORTHO05D007680 2.4e-59 233.0 246 50.8
TAR362G1293 Trochodendron aralioides HOM05D006451 ORTHO05D007680 2.4e-59 233.0 245 50.2
vmacro15365 Vaccinium macrocarpon HOM05D006451 ORTHO05D007680 2.4e-59 233.0 246 49.2
CsaV3_2G013500 Cucumis sativus L. HOM05D006451 ORTHO05D007680 3.1e-59 232.6 247 49.0
Thecc.04G237100 Theobroma cacao HOM05D006451 ORTHO05D007680 3.1e-59 232.6 245 51.4
CiPaw.01G196900 Carya illinoinensis HOM05D006451 ORTHO05D007680 5.3e-59 231.9 245 50.2
Duzib151G0283 Durio zibethinus HOM05D006451 ORTHO05D007680 7.0e-59 231.5 245 51.0
Atru.chr4.2399 Acer truncatum HOM05D006451 ORTHO05D007680 1.2e-58 230.7 246 50.4
MSTRG.4055 Avicennia marina HOM05D006451 ORTHO05D007680 1.2e-58 230.7 247 49.0
Sabra10G0060200 Salix brachista HOM05D006451 ORTHO05D007680 1.2e-58 230.7 245 49.8
Aqoxy2G03443 Aquilegia oxysepala HOM05D006451 ORTHO05D007680 1.6e-58 230.3 247 48.2
Lalb_Chr01g0020941 Lupinus albus HOM05D006451 ORTHO05D007680 1.6e-58 230.3 247 49.0
Phvul.007G277400 Phaseolus vulgaris HOM05D006451 ORTHO05D007680 2.6e-58 229.6 247 49.8
Rhsim02G0028200 Rhododendron simsii HOM05D006451 ORTHO05D007680 2.6e-58 229.6 245 49.4
TWI09G1365 Tripterygium wilfordii HOM05D006451 ORTHO05D007680 2.6e-58 229.6 245 49.0
Glyma.02G004400 Glycine max HOM05D006451 ORTHO05D007680 3.5e-58 229.2 247 49.4
HanXRQChr11g0342781 Helianthus annuus HOM05D006451 ORTHO05D007680 3.5e-58 229.2 241 49.0
Sed0026394 Sechium edule HOM05D006451 ORTHO05D007680 3.5e-58 229.2 245 48.6
Potri.010G082900 Populus trichocarpa HOM05D006451 ORTHO05D007680 4.5e-58 228.8 245 49.8
MD13G1198100 Malus domestica HOM05D006451 ORTHO05D007680 5.9e-58 228.4 245 49.8
PGR004G2173 Punica granatum HOM05D006451 ORTHO05D007680 5.9e-58 228.4 245 49.4
BolC8t46894H Brassica oleracea HOM05D004359 ORTHO05D005052 1.0e-57 227.6 245 47.8
Potri.008G156500 Populus trichocarpa HOM05D006451 ORTHO05D007680 1.0e-57 227.6 245 49.0
Zm00001eb031280 Zea mays HOM05D006451 ORTHO05D007680 1.0e-57 227.6 247 46.6
VMungo0720G2899 Vigna mungo HOM05D006451 ORTHO05D007680 1.3e-57 227.3 247 49.8
ECA248G3783 Erigeron canadensis HOM05D006451 ORTHO05D007680 1.7e-57 226.9 245 49.4
Actinidia08470 Actinidia chinensis HOM05D006451 ORTHO05D007680 3.8e-57 225.7 246 48.8
CAN.G1402.12 Capsicum annuum HOM05D006451 ORTHO05D007680 5.0e-57 225.3 247 47.0
PSO170G5536 Papaver somniferum HOM05D006451 ORTHO05D007680 5.0e-57 225.3 245 49.0
A08p37070 Brassica napus HOM05D006451 ORTHO05D007680 6.5e-57 224.9 245 47.8
BraA08t35607Z Brassica rapa HOM05D006451 ORTHO05D007680 6.5e-57 224.9 245 47.8
AUR62034703 Chenopodium quinoa HOM05D006451 ORTHO05D007680 8.5e-57 224.6 247 48.2
Ciclev10005444m.g Citrus clementina HOM05D006451 ORTHO05D007680 8.5e-57 224.6 245 49.0
CANSAT78G2142 Cannabis sativa HOM05D006451 ORTHO05D007680 1.1e-56 224.2 247 47.4
Glyma.10G003800 Glycine max HOM05D006451 ORTHO05D007680 1.1e-56 224.2 247 49.0
Psat6g104120 Pisum sativum HOM05D006451 ORTHO05D007680 1.1e-56 224.2 247 47.0
BcaC07g36931 Brassica carinata HOM05D004359 ORTHO05D005052 1.9e-56 223.4 245 47.3
C08p00930 Brassica napus HOM05D004359 ORTHO05D005052 1.9e-56 223.4 245 47.3
RcHm_v2.0_Chr4g0387501 Rosa chinensis HOM05D006451 ORTHO05D007680 1.9e-56 223.4 244 48.0
PGSC0003DMG402007686 Solanum tuberosum HOM05D006451 ORTHO05D007680 2.5e-56 223.0 248 47.2
CDE10G0543 Ceratophyllum demersum HOM05D006451 ORTHO05D007680 3.2e-56 222.6 244 48.8
Ca_12151_v3 Cicer arietinum L. HOM05D006451 ORTHO05D007680 3.2e-56 222.6 249 48.2
PSO210G4482 Papaver somniferum HOM05D006451 ORTHO05D007680 3.2e-56 222.6 245 48.6
FvH4_4g00880 Fragaria vesca HOM05D006451 ORTHO05D007680 4.2e-56 222.2 244 48.4
Prupe.1G019800 Prunus persica HOM05D006451 ORTHO05D007680 5.5e-56 221.9 245 48.6
Solyc09g082540.3 Solanum lycopersicum HOM05D006451 ORTHO05D007680 7.2e-56 221.5 247 47.0
Sopen09g031400 Solanum pennellii HOM05D006451 ORTHO05D007680 7.2e-56 221.5 247 47.0
Sabra08G0119100 Salix brachista HOM05D006451 ORTHO05D007680 1.2e-55 220.7 247 48.2
MD16G1198200 Malus domestica HOM05D006451 ORTHO05D007680 1.6e-55 220.3 245 48.6
Os12g0604800 Oryza sativa ssp. japonica HOM05D006451 ORTHO05D007680 1.6e-55 220.3 247 45.3
THA.LOC104826059 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 1.6e-55 220.3 245 46.9
CDE10G0598 Ceratophyllum demersum HOM05D006451 ORTHO05D007680 2.1e-55 219.9 246 48.8
arahy.Tifrunner.gnm1.ann1.E7JLC4 Arachis hypogaea HOM05D006451 ORTHO05D007680 3.6e-55 219.2 274 44.2
CSS0023735 Camellia sinensis var. sinensis HOM05D006451 ORTHO05D007680 3.6e-55 219.2 245 46.9
SGA_v2.0_scaffold191G40453 Striga asiatica HOM05D006451 ORTHO05D007680 3.6e-55 219.2 231 49.4
HPP92_001912 Vanilla planifolia HOM05D006451 ORTHO05D007680 3.6e-55 219.2 244 48.4
Nitab4.5_0000085g0050 Nicotiana tabacum HOM05D006451 ORTHO05D007680 4.7e-55 218.8 247 46.6
Medtr1g041435 Medicago truncatula HOM05D006451 ORTHO05D007680 8.0e-55 218.0 247 46.2
BcaC07g42200 Brassica carinata HOM05D006451 ORTHO05D007680 2.3e-54 216.5 245 46.1
AUR62043956 Chenopodium quinoa HOM05D006451 ORTHO05D007680 5.2e-54 215.3 247 46.2
ClCG06G006410 Citrullus lanatus HOM05D006451 ORTHO05D007680 6.7e-54 214.9 262 45.4
Lsat_1_v5_gn_1_112581 Lactuca sativa HOM05D006451 ORTHO05D007680 6.7e-54 214.9 237 48.1
Cfa008457 Carpinus fangiana HOM05D006451 ORTHO05D007680 2.6e-53 213.0 229 49.8
CSS0014602 Camellia sinensis var. sinensis HOM05D006451 ORTHO05D007680 2.8e-52 209.5 241 46.9
Eucgr.H03421 Eucalyptus grandis HOM05D006451 ORTHO05D007680 4.8e-52 208.8 229 48.0
Nitab4.5_0003249g0030 Nicotiana tabacum HOM05D006451 ORTHO05D007680 4.8e-52 208.8 232 49.6
Dinv44567 Davidia involucrata HOM05D006451 ORTHO05D007680 8.2e-52 208.0 230 48.3
Peaxi162Scf00520g00039 Petunia axillaris HOM05D006451 ORTHO05D007680 2.4e-51 206.5 229 48.9
FAN22G0671 Fragaria x ananassa HOM05D006451 ORTHO05D007680 3.1e-51 206.1 276 43.1
Lj6A610G48 Lonicera japonica HOM05D006451 ORTHO05D007680 3.1e-51 206.1 227 48.9
MELO3C014291.2 Cucumis melo HOM05D006451 ORTHO05D007680 1.6e-50 203.8 227 46.7
Haze_11218 Corylus avellana HOM05D006451 ORTHO05D007680 2.7e-50 203.0 252 45.2
Migut.G00375 Erythranthe guttata HOM05D006451 ORTHO05D007680 2.7e-50 203.0 227 48.0
CBR_g18988 Chara braunii HOM05D006451 ORTHO05D007680 5.0e-49 198.7 247 42.9
FAN17G1940 Fragaria x ananassa HOM05D006451 ORTHO05D007680 8.5e-49 198.0 259 42.5
Ah.07g204140 Amaranthus hybridus HOM05D006451 ORTHO05D007680 4.2e-48 195.7 245 42.4
EL10Ac3g06461 Beta vulgaris HOM05D006451 ORTHO05D007680 6.8e-46 188.3 322 37.3
Thhalv10008141m.g Eutrema salsugineum HOM05D006451 ORTHO05D007680 9.8e-45 184.5 212 45.8
Aa31LG1G20650 Aethionema arabicum HOM05D006451 ORTHO05D007680 1.1e-43 181.0 209 45.9
Carub.0001s0338 Capsella rubella HOM05D006451 ORTHO05D007680 1.4e-43 180.6 210 44.8
Sp1g03010 Schrenkiella parvula HOM05D006451 ORTHO05D007680 9.1e-43 177.9 210 44.8
AL1G13790 Arabidopsis lyrata HOM05D006451 ORTHO05D007680 1.2e-42 177.6 210 44.3
AT1G04190 Arabidopsis thaliana HOM05D006451 ORTHO05D007680 2.7e-42 176.4 210 44.3
THA.LOC104801113 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 1.0e-41 174.5 210 43.3
Nn6g34139 Nelumbo nucifera HOM05D006451 ORTHO05D007680 2.3e-41 173.3 241 42.3
CARHR003520 Cardamine hirsuta HOM05D006451 ORTHO05D007680 2.9e-41 172.9 210 44.3
unitig_899.g14873 Utricularia gibba HOM05D006451 ORTHO05D007680 1.1e-40 171.0 236 41.9
arahy.Tifrunner.gnm1.ann1.9LTU7I Arachis hypogaea HOM05D006451 ORTHO05D007680 1.0e-38 164.5 169 47.9
arahy.Tifrunner.gnm1.ann1.D3KIH0 Arachis hypogaea HOM05D006451 ORTHO05D007680 1.0e-38 164.5 169 47.9
SalBow2G3248 Salvia bowleyana HOM05D006451 ORTHO05D007680 6.3e-36 155.2 145 53.1
DCAR_027237 Daucus carota HOM05D006451 ORTHO05D007680 2.3e-30 136.7 185 42.2
Pp3c17_1530 Physcomitrium patens HOM05D006451 ORTHO05D007680 1.7e-28 130.6 170 42.9
FAN12G3362 Fragaria x ananassa HOM05D006451 ORTHO05D007680 6.4e-28 128.6 183 42.1
TPR.G25159 Trifolium pratense HOM05D006451 ORTHO05D007680 5.2e-22 109.0 168 39.3
FAN12G0848 Fragaria x ananassa HOM05D006451 ORTHO05D007680 4.1e-19 99.4 68 63.2
Haze_11222 Corylus avellana HOM05D006451 ORTHO05D007680 2.1e-15 87.0 279 28.7
arahy.Tifrunner.gnm1.ann1.1SA9RR Arachis hypogaea HOM05D006451 ORTHO05D007680 1.9e-08 63.9 71 49.3


User provided reference genes

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