Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0626 Selaginella moellendorffii HOM05D006040 ORTHO05D007134 1.2e-79 299.7 140 100.0
AUR62005943 Chenopodium quinoa HOM05D006040 ORTHO05D007134 2.0e-34 149.4 171 43.9
EL10Ac3g05126 Beta vulgaris HOM05D006040 ORTHO05D007134 2.6e-34 149.1 171 44.4
Sc25g0001060 Simmondsia chinensis HOM05D006040 ORTHO05D007134 2.6e-34 149.1 167 45.5
Zm00001eb209800 Zea mays HOM05D006040 ORTHO05D007134 3.4e-34 148.7 178 44.9
ATR0579G018 Amborella trichopoda HOM05D006040 ORTHO05D007134 5.8e-34 147.9 181 47.0
GSVIVG01038686001 Vitis vinifera HOM05D006040 ORTHO05D007134 5.8e-34 147.9 170 45.9
Ca_16841_v3 Cicer arietinum L. HOM05D006040 ORTHO05D007134 1.3e-33 146.7 162 46.3
TPR.G35913 Trifolium pratense HOM05D006040 ORTHO05D007134 1.3e-33 146.7 163 47.2
Glyma.06G139400 Glycine max HOM05D006040 ORTHO05D007134 2.9e-33 145.6 162 47.5
Os02g0106700 Oryza sativa ssp. japonica HOM05D006040 ORTHO05D007134 2.9e-33 145.6 180 42.8
Potri.012G004300 Populus trichocarpa HOM05D006040 ORTHO05D007134 2.9e-33 145.6 214 39.7
SalBow2G1501 Salvia bowleyana HOM05D006040 ORTHO05D007134 2.9e-33 145.6 174 43.1
Lj3C891T14 Lonicera japonica HOM05D006040 ORTHO05D007134 4.9e-33 144.8 187 41.7
AUR62028121 Chenopodium quinoa HOM05D006040 ORTHO05D007134 6.4e-33 144.4 173 44.5
Medtr3g093420 Medicago truncatula HOM05D006040 ORTHO05D007134 6.4e-33 144.4 161 47.2
MSTRG.18 Avicennia marina HOM05D006040 ORTHO05D007134 1.1e-32 143.7 186 40.9
Psat5g070440 Pisum sativum HOM05D006040 ORTHO05D007134 1.1e-32 143.7 151 49.0
Hund21080 Selenicereus undatus HOM05D006040 ORTHO05D007134 1.1e-32 143.7 175 44.6
Peaxi162Scf00815g00228 Petunia axillaris HOM05D006040 ORTHO05D007134 1.9e-32 142.9 181 42.5
Lalb_Chr08g0239381 Lupinus albus HOM05D006040 ORTHO05D007134 2.4e-32 142.5 161 46.0
Sabra12G0000200 Salix brachista HOM05D006040 ORTHO05D007134 3.2e-32 142.1 214 40.2
Cfa018660 Carpinus fangiana HOM05D006040 ORTHO05D007134 4.2e-32 141.7 217 39.2
Lj1g0004094 Lotus japonicus HOM05D006040 ORTHO05D007134 4.2e-32 141.7 162 45.1
SEGI_40721 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 9.3e-32 140.6 244 37.7
Solyc06g072970.3 Solanum lycopersicum HOM05D006040 ORTHO05D007134 9.3e-32 140.6 181 41.4
Sopen06g029320 Solanum pennellii HOM05D006040 ORTHO05D007134 9.3e-32 140.6 181 41.4
DCAR_010554 Daucus carota HOM05D006040 ORTHO05D007134 1.6e-31 139.8 195 39.5
CANSAT21G0186 Cannabis sativa HOM05D006040 ORTHO05D007134 2.1e-31 139.4 201 39.8
PSO063G2217 Papaver somniferum HOM05D006040 ORTHO05D007134 2.1e-31 139.4 219 37.4
PGSC0003DMG400026928 Solanum tuberosum HOM05D006040 ORTHO05D007134 2.7e-31 139.0 181 39.8
arahy.Tifrunner.gnm1.ann1.QSB9JP Arachis hypogaea HOM05D006040 ORTHO05D007134 3.5e-31 138.7 201 40.3
Cpa.g.sc3.191 Carica papaya HOM05D006040 ORTHO05D007134 3.5e-31 138.7 191 42.4
Nitab4.5_0000115g0200 Nicotiana tabacum HOM05D006040 ORTHO05D007134 3.5e-31 138.7 179 41.9
Nitab4.5_0003012g0150 Nicotiana tabacum HOM05D006040 ORTHO05D007134 3.5e-31 138.7 181 40.3
Zm00001eb229510 Zea mays HOM05D006040 ORTHO05D007134 3.5e-31 138.7 178 42.1
HPP92_012812 Vanilla planifolia HOM05D006040 ORTHO05D007134 7.9e-31 137.5 196 39.3
Atru.chr12.2497 Acer truncatum HOM05D006040 ORTHO05D007134 1.0e-30 137.1 200 42.0
Atru.chr12.2521 Acer truncatum HOM05D006040 ORTHO05D007134 1.0e-30 137.1 200 42.0
FvH4_7g32290 Fragaria vesca HOM05D006040 ORTHO05D007134 1.0e-30 137.1 218 39.0
Phvul.009G040600 Phaseolus vulgaris HOM05D006040 ORTHO05D007134 1.0e-30 137.1 162 45.7
Prupe.2G322500 Prunus persica HOM05D006040 ORTHO05D007134 1.3e-30 136.7 217 37.3
FAN20G2114 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.8e-30 136.3 218 38.5
SGA_v2.0_scaffold59G20786 Striga asiatica HOM05D006040 ORTHO05D007134 1.8e-30 136.3 175 41.1
TWI13G0007 Tripterygium wilfordii HOM05D006040 ORTHO05D007134 1.8e-30 136.3 218 36.2
TWI74G0239 Tripterygium wilfordii HOM05D006040 ORTHO05D007134 1.8e-30 136.3 218 36.2
CsaV3_2G035690 Cucumis sativus L. HOM05D006040 ORTHO05D007134 3.0e-30 135.6 208 38.9
CAN.G65.140 Capsicum annuum HOM05D006040 ORTHO05D007134 3.9e-30 135.2 181 41.4
MELO3C024776.2 Cucumis melo HOM05D006040 ORTHO05D007134 5.1e-30 134.8 208 39.9
PSO017G1458 Papaver somniferum HOM05D006040 ORTHO05D007134 6.7e-30 134.4 219 37.0
unitig_578.g16670 Utricularia gibba HOM05D006040 ORTHO05D007134 6.7e-30 134.4 183 39.9
arahy.Tifrunner.gnm1.ann1.53C9AK Arachis hypogaea HOM05D006040 ORTHO05D007134 8.7e-30 134.0 201 39.3
Cc02_g00560 Coffea canephora HOM05D006040 ORTHO05D007134 8.7e-30 134.0 198 37.9
Thecc.03G212500 Theobroma cacao HOM05D006040 ORTHO05D007134 8.7e-30 134.0 194 40.2
Actinidia18692 Actinidia chinensis HOM05D006040 ORTHO05D007134 1.1e-29 133.7 201 39.3
Gorai.004G126800 Gossypium raimondii HOM05D006040 ORTHO05D007134 1.1e-29 133.7 194 39.7
Aa31LG11G3920 Aethionema arabicum HOM05D006040 ORTHO05D007134 1.5e-29 133.3 166 45.8
Hma1.2p1_1235F.1_g269220 Hydrangea macrophylla HOM05D006040 ORTHO05D007134 1.5e-29 133.3 205 40.0
Sed0006638 Sechium edule HOM05D006040 ORTHO05D007134 1.9e-29 132.9 207 38.6
Rhsim09G0211300 Rhododendron simsii HOM05D006040 ORTHO05D007134 2.5e-29 132.5 202 40.1
FAN06G3790 Fragaria x ananassa HOM05D006040 ORTHO05D007134 3.3e-29 132.1 218 38.1
ECA238G4129 Erigeron canadensis HOM05D006040 ORTHO05D007134 4.3e-29 131.7 179 40.2
Carub.0006s2254 Capsella rubella HOM05D006040 ORTHO05D007134 7.4e-29 131.0 166 45.8
ClCG02G007980 Citrullus lanatus HOM05D006040 ORTHO05D007134 7.4e-29 131.0 208 38.5
Lalb_Chr10g0102951 Lupinus albus HOM05D006040 ORTHO05D007134 7.4e-29 131.0 216 36.1
MD07G1303900 Malus domestica HOM05D006040 ORTHO05D007134 7.4e-29 131.0 217 36.9
Eucgr.A00979 Eucalyptus grandis HOM05D006040 ORTHO05D007134 9.6e-29 130.6 213 37.1
Psat2g061600 Pisum sativum HOM05D006040 ORTHO05D007134 9.6e-29 130.6 216 35.6
QL01p000066 Quercus lobata HOM05D006040 ORTHO05D007134 9.6e-29 130.6 217 35.0
THA.LOC104798996 Tarenaya hassleriana HOM05D006040 ORTHO05D007134 9.6e-29 130.6 182 42.3
VMungo0647G0797 Vigna mungo HOM05D006040 ORTHO05D007134 9.6e-29 130.6 216 36.6
Glyma.02G220600 Glycine max HOM05D006040 ORTHO05D007134 1.3e-28 130.2 216 36.6
HanXRQChr14g0463001 Helianthus annuus HOM05D006040 ORTHO05D007134 1.3e-28 130.2 173 41.6
Dinv29187 Davidia involucrata HOM05D006040 ORTHO05D007134 1.6e-28 129.8 221 35.7
Medtr5g068730 Medicago truncatula HOM05D006040 ORTHO05D007134 1.6e-28 129.8 216 36.6
Phvul.008G187700 Phaseolus vulgaris HOM05D006040 ORTHO05D007134 1.6e-28 129.8 215 35.8
Ca_05537_v3 Cicer arietinum L. HOM05D006040 ORTHO05D007134 2.1e-28 129.4 215 37.7
Manes.05G196800 Manihot esculenta HOM05D006040 ORTHO05D007134 2.1e-28 129.4 210 36.2
RcHm_v2.0_Chr1g0383341 Rosa chinensis HOM05D006040 ORTHO05D007134 2.8e-28 129.0 217 35.9
Lsat_1_v5_gn_8_36881 Lactuca sativa HOM05D006040 ORTHO05D007134 3.6e-28 128.6 189 39.7
Sp2g22720 Schrenkiella parvula HOM05D006040 ORTHO05D007134 4.8e-28 128.3 166 42.8
Aqoxy3G00220 Aquilegia oxysepala HOM05D006040 ORTHO05D007134 6.2e-28 127.9 221 34.8
LjContig00155g0021870 Lotus japonicus HOM05D006040 ORTHO05D007134 6.2e-28 127.9 216 34.7
Migut.F00965 Erythranthe guttata HOM05D006040 ORTHO05D007134 1.1e-27 127.1 179 39.1
FvH4_7g33360 Fragaria vesca HOM05D006040 ORTHO05D007134 1.1e-27 127.1 217 34.6
PGR042G3864 Punica granatum HOM05D006040 ORTHO05D007134 1.8e-27 126.3 213 36.2
Pp3c12_6120 Physcomitrium patens HOM05D006040 ORTHO05D007134 2.4e-27 125.9 273 31.9
AT5G24680 Arabidopsis thaliana HOM05D006040 ORTHO05D007134 4.0e-27 125.2 166 44.6
C07p43010 Brassica napus HOM05D006040 ORTHO05D007134 4.0e-27 125.2 166 42.8
BolC7t44830H Brassica oleracea HOM05D006040 ORTHO05D007134 4.0e-27 125.2 166 42.8
A06p35530 Brassica napus HOM05D006040 ORTHO05D007134 6.9e-27 124.4 167 40.7
BraA06t26478Z Brassica rapa HOM05D006040 ORTHO05D007134 6.9e-27 124.4 167 40.7
TPR.G27916 Trifolium pratense HOM05D006040 ORTHO05D007134 6.9e-27 124.4 216 35.6
Thhalv10004343m.g Eutrema salsugineum HOM05D006040 ORTHO05D007134 1.2e-26 123.6 166 42.2
AL6G36290 Arabidopsis lyrata HOM05D006040 ORTHO05D007134 3.4e-26 122.1 166 44.0
FAN03G3503 Fragaria x ananassa HOM05D006040 ORTHO05D007134 3.4e-26 122.1 222 34.2
Pp3c13_14780 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.1e-24 117.1 281 29.9
BcaNung01250 Brassica carinata HOM05D006040 ORTHO05D007134 3.2e-24 115.5 174 40.2
TAR375G0263 Trochodendron aralioides HOM05D006040 ORTHO05D007134 7.1e-24 114.4 228 33.8
MBI12_g33183_MAGBIO Magnolia biondii HOM05D006040 ORTHO05D007134 1.6e-23 113.2 253 30.4
Pp3c25_2290 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.3e-22 110.2 273 30.4
Pp3c20_10180 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.5e-21 106.7 283 27.6
SEGI_39404 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 8.1e-20 100.9 104 44.2
Glyma.04G225400 Glycine max HOM05D006040 ORTHO05D007134 1.1e-19 100.5 128 43.8
SEGI_38707 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 3.1e-19 99.0 98 44.9
Mapoly0088s0074 Marchantia polymorpha HOM05D006040 ORTHO05D007134 9.0e-19 97.4 63 71.4
CSS0020482 Camellia sinensis var. sinensis HOM05D006040 ORTHO05D007134 1.2e-18 97.1 187 32.1
CBR_g3746 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-18 96.3 60 71.7
Haze_00002 Corylus avellana HOM05D006040 ORTHO05D007134 2.0e-18 96.3 59 71.2
CARHR188790 Cardamine hirsuta HOM05D006040 ORTHO05D007134 4.5e-18 95.1 59 69.5
Mapoly0044s0025 Marchantia polymorpha HOM05D006040 ORTHO05D007134 5.8e-18 94.7 62 66.1
vmacro10175 Vaccinium macrocarpon HOM05D006040 ORTHO05D007134 7.6e-18 94.4 61 67.2
SEGI_00936 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 1.0e-17 94.0 94 47.9
COL.COLO4_14403 Corchorus olitorius HOM05D002417 ORTHO05D002589 4.9e-17 91.7 141 36.9
FAN10G3876 Fragaria x ananassa HOM05D006040 ORTHO05D007134 4.9e-17 91.7 59 67.8
Duzib068G0842 Durio zibethinus HOM05D006040 ORTHO05D007134 6.5e-17 91.3 59 71.2
FAN10G2970 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.1e-16 90.5 59 66.1
CBR_g29958 Chara braunii HOM05D006040 ORTHO05D007134 1.4e-16 90.1 60 68.3
FAN01G0445 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.4e-16 90.1 59 66.1
Pp3c23_1100 Physcomitrium patens HOM05D006040 ORTHO05D007134 3.2e-16 89.0 67 59.7
Glyma.14G187200 Glycine max HOM05D006040 ORTHO05D007134 3.9e-14 82.0 152 36.2
Gohir.A08G107000 Gossypium hirsutum HOM05D006040 ORTHO05D007134 6.7e-14 81.3 157 33.8
MD01G1231800 Malus domestica HOM05D006040 ORTHO05D007134 8.7e-14 80.9 52 65.4
Cre05.g240500 Chlamydomonas reinhardtii HOM05D006040 ORTHO05D007134 7.4e-13 77.8 64 56.2
FvH4_7g33700 Fragaria vesca HOM05D006040 ORTHO05D007134 4.8e-12 75.1 49 67.3
MD01G1231900 Malus domestica HOM05D006040 ORTHO05D007134 4.8e-12 75.1 72 47.2
Gohir.D08G118000 Gossypium hirsutum HOM05D006040 ORTHO05D007134 1.4e-11 73.6 73 46.6
Lalb_Chr14g0364691 Lupinus albus HOM05D006040 ORTHO05D007134 5.3e-11 71.6 48 64.6
VMungo1309G2872 Vigna mungo HOM05D006040 ORTHO05D007134 1.4e-08 63.5 68 47.1


User provided reference genes

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