Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 1.3e-67 259.6 137 100.0
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 3.7e-33 145.2 140 55.0
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 3.1e-32 142.1 137 54.7
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.5e-31 139.8 134 53.0
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 1.5e-31 139.8 134 54.5
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 4.5e-31 138.3 134 54.5
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 5.9e-31 137.9 137 53.3
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 1.0e-30 137.1 132 54.5
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.3e-30 136.7 142 50.7
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 1.7e-30 136.3 134 52.2
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 1.7e-30 136.3 134 55.2
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.7e-30 136.3 137 52.6
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 2.2e-30 136.0 124 55.6
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 2.2e-30 136.0 133 53.4
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 2.2e-30 136.0 124 54.0
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 2.2e-30 136.0 137 52.6
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 2.9e-30 135.6 137 53.3
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 3.8e-30 135.2 131 52.7
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 3.8e-30 135.2 132 52.3
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 3.8e-30 135.2 134 53.7
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 3.8e-30 135.2 140 53.6
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 5.0e-30 134.8 137 51.8
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 6.5e-30 134.4 132 52.3
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 6.5e-30 134.4 134 51.5
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 8.5e-30 134.0 125 52.0
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 8.5e-30 134.0 134 52.2
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 1.1e-29 133.7 128 54.7
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.4e-29 133.3 125 52.0
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.4e-29 133.3 136 52.2
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 1.4e-29 133.3 134 53.0
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.4e-29 133.3 129 53.5
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 1.9e-29 132.9 138 50.0
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 2.5e-29 132.5 125 52.8
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 3.2e-29 132.1 140 50.7
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 3.2e-29 132.1 125 51.2
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 3.2e-29 132.1 134 53.0
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 3.2e-29 132.1 132 53.0
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 4.2e-29 131.7 136 52.2
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 5.5e-29 131.3 134 49.3
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 5.5e-29 131.3 134 50.7
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 5.5e-29 131.3 125 54.4
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 5.5e-29 131.3 128 52.3
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 5.5e-29 131.3 128 52.3
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 5.5e-29 131.3 128 50.8
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 5.5e-29 131.3 134 53.7
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 5.5e-29 131.3 126 53.2
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 7.2e-29 131.0 125 51.2
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 7.2e-29 131.0 139 51.1
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 7.2e-29 131.0 134 52.2
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 7.2e-29 131.0 134 53.7
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 7.2e-29 131.0 127 50.4
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 7.2e-29 131.0 134 50.7
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 1.2e-28 130.2 139 51.1
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.2e-28 130.2 128 51.6
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.2e-28 130.2 132 51.5
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 1.6e-28 129.8 126 51.6
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 1.6e-28 129.8 134 48.5
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.6e-28 129.8 137 51.8
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 1.6e-28 129.8 140 48.6
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 2.1e-28 129.4 124 50.8
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 2.7e-28 129.0 134 50.0
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 2.7e-28 129.0 125 51.2
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 2.7e-28 129.0 136 50.7
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 4.7e-28 128.3 137 49.6
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 6.1e-28 127.9 132 49.2
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 8.0e-28 127.5 137 49.6
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 1.4e-27 126.7 133 50.4
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 1.8e-27 126.3 131 49.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 2.3e-27 125.9 125 48.8
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 2.3e-27 125.9 136 47.8
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 3.0e-27 125.6 129 48.1
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 3.9e-27 125.2 129 47.3
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 3.9e-27 125.2 135 49.6
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 3.9e-27 125.2 136 49.3
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 5.2e-27 124.8 134 48.5
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 5.2e-27 124.8 137 45.3
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 6.7e-27 124.4 129 51.2
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 8.8e-27 124.0 135 49.6
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 8.8e-27 124.0 135 49.6
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 8.8e-27 124.0 135 48.1
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 1.5e-26 123.2 136 47.1
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.5e-26 123.2 124 49.2
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 2.0e-26 122.9 134 48.5
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 2.0e-26 122.9 136 49.3
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 3.3e-26 122.1 133 48.9
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 3.3e-26 122.1 137 48.2
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 4.4e-26 121.7 125 49.6
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 4.4e-26 121.7 125 48.8
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 7.4e-26 120.9 134 49.3
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 9.7e-26 120.6 134 48.5
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 1.3e-25 120.2 133 48.1
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 1.7e-25 119.8 134 47.8
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 2.8e-25 119.0 164 43.3
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.1e-24 117.1 125 47.2
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 1.4e-24 116.7 156 44.2
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 1.4e-24 116.7 133 46.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.4e-24 116.7 133 46.6
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 3.1e-24 115.5 116 51.7
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.1e-24 115.2 133 45.9
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.1e-24 115.2 133 48.1
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 9.1e-24 114.0 140 45.7
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 1.7e-22 109.8 136 41.9
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.5e-18 96.7 101 49.5
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 6.3e-17 91.3 142 38.0
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 2.4e-16 89.4 90 50.0
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 9.1e-16 87.4 89 53.9
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.8e-11 73.2 93 46.2
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 8.8e-11 70.9 69 49.3
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 1.1e-08 63.9 67 49.3
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 2.3e-06 56.2 105 28.6


User provided reference genes

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