Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 1.3e-100 369.8 188 100.0
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 3.4e-53 212.2 185 55.1
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 1.8e-46 189.9 162 54.9
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.3e-46 189.5 162 54.3
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 5.2e-46 188.3 165 56.4
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 6.8e-46 188.0 168 54.2
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.5e-45 186.8 170 51.8
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 2.0e-45 186.4 161 54.7
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 3.4e-45 185.7 162 56.2
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 5.8e-45 184.9 182 47.8
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 5.8e-45 184.9 161 56.5
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 7.5e-45 184.5 162 53.7
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 9.8e-45 184.1 162 56.2
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.3e-44 183.7 163 55.2
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 1.3e-44 183.7 162 53.7
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.3e-44 183.7 159 54.1
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.3e-44 183.7 161 55.3
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.3e-44 183.7 161 55.3
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.7e-44 183.3 160 55.0
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 1.7e-44 183.3 163 54.0
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 2.9e-44 182.6 163 54.0
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 2.9e-44 182.6 161 54.0
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 3.7e-44 182.2 161 54.7
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 3.7e-44 182.2 169 53.3
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 4.9e-44 181.8 162 53.1
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 4.9e-44 181.8 162 55.6
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 6.4e-44 181.4 163 55.8
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 8.3e-44 181.0 164 51.2
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 8.3e-44 181.0 160 52.5
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 1.1e-43 180.6 144 70.1
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.1e-43 180.6 165 50.9
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.9e-43 179.9 161 53.4
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.9e-43 179.9 161 54.0
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 1.9e-43 179.9 163 55.8
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 1.9e-43 179.9 165 54.5
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 2.4e-43 179.5 163 51.5
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 4.1e-43 178.7 165 51.5
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 5.4e-43 178.3 162 54.3
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 7.0e-43 177.9 165 51.5
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 9.2e-43 177.6 163 54.0
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 9.2e-43 177.6 163 51.5
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.2e-43 177.6 160 50.6
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 3.5e-42 175.6 165 50.9
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 6.0e-42 174.9 162 51.9
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 7.8e-42 174.5 161 53.4
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.0e-41 174.1 166 51.2
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 2.3e-41 172.9 165 49.7
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 3.9e-41 172.2 161 54.7
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.5e-40 170.2 160 53.1
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.5e-40 170.2 162 52.5
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.5e-40 170.2 162 53.7
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.5e-40 170.2 186 44.1
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 1.5e-40 170.2 161 52.2
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 2.5e-40 169.5 166 49.4
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.5e-40 169.5 166 49.4
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 5.6e-40 168.3 165 49.7
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.2e-39 167.2 165 49.7
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 1.6e-39 166.8 163 50.9
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.6e-39 166.8 184 45.1
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 2.1e-39 166.4 163 50.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 2.1e-39 166.4 165 48.5
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 2.8e-39 166.0 158 51.9
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 3.6e-39 165.6 158 53.2
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 4.7e-39 165.2 160 51.9
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 6.2e-39 164.9 163 52.1
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 1.1e-38 164.1 161 51.6
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 1.1e-38 164.1 165 51.5
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.4e-38 163.7 166 53.0
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 1.4e-38 163.7 158 51.3
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.3e-38 162.9 161 49.7
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 3.1e-38 162.5 160 51.2
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.1e-38 162.5 162 48.1
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 3.1e-38 162.5 162 53.1
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 3.1e-38 162.5 157 49.7
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 4.0e-38 162.2 161 49.7
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 5.2e-38 161.8 161 50.3
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 5.2e-38 161.8 162 52.5
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 8.9e-38 161.0 161 49.7
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.5e-37 160.2 164 48.2
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 3.4e-37 159.1 164 49.4
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 3.4e-37 159.1 161 47.2
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 5.8e-37 158.3 141 56.0
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 7.5e-37 157.9 163 48.5
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 9.9e-37 157.5 162 46.9
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 1.3e-36 157.1 161 51.6
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 1.3e-36 157.1 158 52.5
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.3e-36 157.1 161 48.4
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 2.9e-36 156.0 166 48.2
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 2.9e-36 156.0 162 50.0
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.7e-36 155.6 161 46.6
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 8.3e-36 154.5 160 49.4
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 2.4e-35 152.9 166 46.4
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.2e-34 150.6 159 56.0
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.1e-34 149.8 162 46.3
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.7e-34 149.4 162 46.3
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 3.0e-33 146.0 142 50.0
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 5.1e-33 145.2 152 50.7
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 8.6e-33 144.4 161 44.7
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 4.3e-32 142.1 152 50.0
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.8e-30 136.7 153 43.1
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 2.6e-29 132.9 165 47.9
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.4e-29 132.5 131 48.9
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 5.8e-29 131.7 141 46.1
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 5.8e-29 131.7 157 44.6
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 2.9e-28 129.4 168 42.3
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 2.9e-28 129.4 164 42.1
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 5.4e-27 125.2 125 52.8
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 7.1e-27 124.8 165 41.2
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 9.2e-27 124.4 169 39.6
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-25 120.6 166 39.8
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.1e-22 109.4 113 44.2
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.3e-17 94.0 80 53.8
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 2.3e-17 93.2 127 40.2
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 3.0e-17 92.8 85 49.4
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.1e-16 90.9 165 34.5
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.7e-12 77.0 95 41.1
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 3.7e-07 59.3 38 68.4
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.4e-06 56.6 41 61.0


User provided reference genes

Program Settings