Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0358 Selaginella moellendorffii HOM05D003937 ORTHO05D004583 3.3e-118 428.7 271 100.0
AagrBONN_evm.TU.Sc2ySwM_117.297 Anthoceros agrestis HOM05D003937 ORTHO05D004583 2.7e-19 100.1 186 39.2
Mapoly0074s0020 Marchantia polymorpha HOM05D003937 ORTHO05D004583 8.7e-18 95.1 197 39.6
SEGI_28645 Sequoiadendron giganteum HOM05D003937 ORTHO05D004583 1.1e-15 88.2 156 42.9
Pp3c19_6980 Physcomitrium patens HOM05D003937 ORTHO05D004583 5.3e-15 85.9 172 39.0
GSVIVG01009897001 Vitis vinifera HOM05D003937 ORTHO05D004583 3.5e-11 73.2 103 40.8
MBI08_g12714_MAGBIO Magnolia biondii HOM05D003937 ORTHO05D004583 6.0e-11 72.4 89 48.3
Cc10_g00590 Coffea canephora HOM05D003937 ORTHO05D004583 1.3e-10 71.2 80 48.8
Sc18g0006030 Simmondsia chinensis HOM05D003937 ORTHO05D004583 3.9e-10 69.7 91 45.1
CAN.G311.122 Capsicum annuum HOM05D003937 ORTHO05D004583 1.5e-09 67.8 70 54.3
Nn6g31719 Nelumbo nucifera HOM05D003937 ORTHO05D004583 1.9e-09 67.4 70 51.4
HPP92_021046 Vanilla planifolia HOM05D003937 ORTHO05D004583 1.9e-09 67.4 65 52.3
Os04g0136900 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 2.5e-09 67.0 79 50.6
Zm00001eb104250 Zea mays HOM05D003937 ORTHO05D004583 2.5e-09 67.0 81 46.9
Nn5g30963 Nelumbo nucifera HOM05D003937 ORTHO05D004583 3.3e-09 66.6 166 34.3
CDE05G2511 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 4.3e-09 66.2 64 53.1
Migut.N02961 Erythranthe guttata HOM05D003937 ORTHO05D004583 4.3e-09 66.2 72 50.0
Thecc.02G044800 Theobroma cacao HOM05D003937 ORTHO05D004583 4.3e-09 66.2 170 32.4
Rhsim07G0256300 Rhododendron simsii HOM05D003937 ORTHO05D004583 5.6e-09 65.9 68 48.5
Solyc04g082450.3 Solanum lycopersicum HOM05D003937 ORTHO05D004583 7.3e-09 65.5 74 50.0
Sopen04g036060 Solanum pennellii HOM05D003937 ORTHO05D004583 7.3e-09 65.5 74 50.0
Actinidia37917 Actinidia chinensis HOM05D003937 ORTHO05D004583 9.6e-09 65.1 81 43.2
Aqoxy5G01031 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 9.6e-09 65.1 116 39.7
PSO541G3051 Papaver somniferum HOM05D003937 ORTHO05D004583 9.6e-09 65.1 82 42.7
PSO675G5999 Papaver somniferum HOM05D003937 ORTHO05D004583 9.6e-09 65.1 82 42.7
ATR0661G493 Amborella trichopoda HOM05D003937 ORTHO05D004583 1.3e-08 64.7 77 45.5
TAR625G1504 Trochodendron aralioides HOM05D003937 ORTHO05D004583 1.3e-08 64.7 158 36.7
Dinv31951 Davidia involucrata HOM05D003937 ORTHO05D004583 2.8e-08 63.5 96 42.7
GSVIVG01026659001 Vitis vinifera HOM05D003937 ORTHO05D004583 2.8e-08 63.5 101 39.6
Zm00001eb420050 Zea mays HOM05D003937 ORTHO05D004583 4.8e-08 62.8 146 37.0
Nitab4.5_0000588g0020 Nicotiana tabacum HOM05D003937 ORTHO05D004583 8.1e-08 62.0 76 48.7
EL10Ac9g21245 Beta vulgaris HOM05D003937 ORTHO05D004583 1.4e-07 61.2 123 36.6
CDE06G0218 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 1.4e-07 61.2 92 42.4
AUR62011702 Chenopodium quinoa HOM05D003937 ORTHO05D004583 1.4e-07 61.2 167 31.1
HanXRQChr13g0409731 Helianthus annuus HOM05D003937 ORTHO05D004583 1.4e-07 61.2 105 36.2
Manes.04G067300 Manihot esculenta HOM05D003937 ORTHO05D004583 1.4e-07 61.2 157 33.1
VMungo0540G0354 Vigna mungo HOM05D003937 ORTHO05D004583 1.4e-07 61.2 82 40.2
SalBow6G3106 Salvia bowleyana HOM05D003937 ORTHO05D004583 1.8e-07 60.8 125 38.4
TAR381G0291 Trochodendron aralioides HOM05D003937 ORTHO05D004583 1.8e-07 60.8 173 35.3
CANSAT25G1278 Cannabis sativa HOM05D003937 ORTHO05D004583 2.4e-07 60.5 111 36.9
ECA233G5124 Erigeron canadensis HOM05D003937 ORTHO05D004583 2.4e-07 60.5 98 38.8
Glyma.06G000500 Glycine max HOM05D003937 ORTHO05D004583 2.4e-07 60.5 65 44.6
Gohir.D01G166000 Gossypium hirsutum HOM05D003937 ORTHO05D004583 2.4e-07 60.5 101 39.6
Gorai.002G206500 Gossypium raimondii HOM05D003937 ORTHO05D004583 2.4e-07 60.5 101 39.6
CSS0036568 Camellia sinensis var. sinensis HOM05D003937 ORTHO05D004583 3.1e-07 60.1 101 34.7
AUR62012919 Chenopodium quinoa HOM05D003937 ORTHO05D004583 3.1e-07 60.1 167 28.7
Dinv41880 Davidia involucrata HOM05D001927 ORTHO05D001972 3.1e-07 60.1 101 35.6
Hma1.2p1_0271F.1_g108900 Hydrangea macrophylla HOM05D003937 ORTHO05D004583 3.1e-07 60.1 120 36.7
Lalb_Chr08g0246851 Lupinus albus HOM05D003937 ORTHO05D004583 3.1e-07 60.1 169 31.4
Os09g0549400 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 4.0e-07 59.7 105 40.0
FvH4_2g16620 Fragaria vesca HOM05D003937 ORTHO05D004583 5.3e-07 59.3 112 36.6
FAN15G3453 Fragaria x ananassa HOM05D003937 ORTHO05D004583 5.3e-07 59.3 112 36.6
FAN24G0691 Fragaria x ananassa HOM05D003937 ORTHO05D004583 5.3e-07 59.3 112 36.6
MD06G1009100 Malus domestica HOM05D003937 ORTHO05D004583 5.3e-07 59.3 80 40.0
QL11p055907 Quercus lobata HOM05D003937 ORTHO05D004583 5.3e-07 59.3 64 50.0
Duzib052G0838 Durio zibethinus HOM05D003937 ORTHO05D004583 9.0e-07 58.5 65 47.7
FvH4_5g25250 Fragaria vesca HOM05D003937 ORTHO05D004583 9.0e-07 58.5 74 40.5
ClCG02G009960 Citrullus lanatus HOM05D003937 ORTHO05D004583 1.2e-06 58.2 64 46.9
Duzib132G1231 Durio zibethinus HOM05D003937 ORTHO05D004583 1.2e-06 58.2 65 46.2
Gohir.A03G209600 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.2e-06 58.2 65 46.2
FAN27G2747 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.5e-06 57.8 113 36.3
Sp7g37440 Schrenkiella parvula HOM05D003937 ORTHO05D004583 1.5e-06 57.8 78 43.6
Sed0010938 Sechium edule HOM05D003937 ORTHO05D004583 1.5e-06 57.8 64 46.9
Cpa.g.sc20.204 Carica papaya HOM05D003937 ORTHO05D004583 2.0e-06 57.4 102 38.2
FAN20G0177 Fragaria x ananassa HOM05D003937 ORTHO05D004583 2.0e-06 57.4 113 36.3
Lsat_1_v5_gn_8_26360 Lactuca sativa HOM05D003937 ORTHO05D004583 2.0e-06 57.4 65 43.1
Sed0014450 Sechium edule HOM05D003937 ORTHO05D004583 2.0e-06 57.4 66 43.9
Aqoxy6G01687 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 2.6e-06 57.0 152 34.9
CDE06G2177 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 2.6e-06 57.0 74 47.3
Glyma.04G000700 Glycine max HOM05D003937 ORTHO05D004583 2.6e-06 57.0 65 41.5
SalBow1G5464 Salvia bowleyana HOM05D003937 ORTHO05D004583 2.6e-06 57.0 119 34.5
vmacro04409 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 2.6e-06 57.0 53 52.8
CsaV3_6G010160 Cucumis sativus L. HOM05D003937 ORTHO05D004583 3.4e-06 56.6 64 45.3
Gohir.A01G174900 Gossypium hirsutum HOM05D003937 ORTHO05D004583 3.4e-06 56.6 159 30.2
MSTRG.24495 Avicennia marina HOM05D003937 ORTHO05D004583 4.5e-06 56.2 105 37.1
CiPaw.05G091700 Carya illinoinensis HOM05D003937 ORTHO05D004583 4.5e-06 56.2 171 30.4
Gohir.D02G231300 Gossypium hirsutum HOM05D003937 ORTHO05D004583 5.8e-06 55.8 169 29.0
Prupe.5G011500 Prunus persica HOM05D003937 ORTHO05D004583 5.8e-06 55.8 80 37.5
vmacro08750 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 5.8e-06 55.8 65 47.7
arahy.Tifrunner.gnm1.ann1.388DF8 Arachis hypogaea HOM05D003937 ORTHO05D004583 7.6e-06 55.5 158 31.6
Ca_16692_v3 Cicer arietinum L. HOM05D003937 ORTHO05D004583 7.6e-06 55.5 65 41.5
RcHm_v2.0_Chr6g0280681 Rosa chinensis HOM05D003937 ORTHO05D004583 7.6e-06 55.5 107 36.4
AL7G10200 Arabidopsis lyrata HOM05D003937 ORTHO05D004583 9.9e-06 55.1 78 39.7
ECA246G4591 Erigeron canadensis HOM05D003937 ORTHO05D004583 9.9e-06 55.1 71 46.5


User provided reference genes

Program Settings