Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 1.2e-302 1042.3 507 100.0
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 5.2e-133 478.8 529 48.8
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 5.2e-125 452.2 439 51.3
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 4.6e-121 439.1 531 45.4
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 2.3e-120 436.8 539 44.7
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 5.6e-119 432.2 523 42.1
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 3.6e-118 429.5 539 43.2
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 6.2e-118 428.7 535 43.4
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 8.1e-118 428.3 532 44.2
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 8.1e-118 428.3 533 43.2
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 1.4e-117 427.6 536 43.7
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 1.4e-117 427.6 536 42.9
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 6.8e-117 425.2 545 42.4
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 1.2e-116 424.5 537 42.5
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 1.5e-116 424.1 537 43.8
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 3.4e-116 422.9 532 42.5
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 4.4e-116 422.5 526 42.8
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 5.8e-116 422.2 530 42.6
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 7.6e-116 421.8 543 42.7
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 9.9e-116 421.4 530 42.6
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.3e-115 421.0 535 42.1
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 2.2e-115 420.2 528 42.6
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 3.7e-115 419.5 532 42.1
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 3.7e-115 419.5 532 43.0
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 3.7e-115 419.5 530 43.4
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 4.9e-115 419.1 535 42.6
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 4.9e-115 419.1 544 42.3
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 6.4e-115 418.7 539 41.7
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 8.4e-115 418.3 529 43.5
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 8.4e-115 418.3 532 41.9
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 1.1e-114 417.9 536 42.2
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 1.1e-114 417.9 536 42.5
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 1.4e-114 417.5 519 43.9
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 1.9e-114 417.2 525 42.7
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 1.9e-114 417.2 526 44.1
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 1.9e-114 417.2 538 41.4
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.9e-114 417.2 524 43.5
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 2.4e-114 416.8 535 42.6
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 3.2e-114 416.4 541 41.6
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 7.1e-114 415.2 533 43.7
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 7.1e-114 415.2 526 42.8
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 9.2e-114 414.8 516 43.8
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 1.2e-113 414.5 525 42.1
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 1.2e-113 414.5 528 41.9
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 2.1e-113 413.7 530 41.5
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 2.7e-113 413.3 530 41.5
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 4.6e-113 412.5 537 43.0
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 6.0e-113 412.1 473 45.5
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 1.0e-112 411.4 531 40.7
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 1.0e-112 411.4 536 40.9
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 1.3e-112 411.0 534 41.8
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 1.3e-112 411.0 534 42.9
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 5.1e-112 409.1 531 42.6
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 5.1e-112 409.1 525 42.1
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 8.6e-112 408.3 523 42.6
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 8.6e-112 408.3 536 40.9
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 1.1e-111 407.9 525 42.7
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 1.1e-111 407.9 525 42.7
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 1.5e-111 407.5 518 43.2
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 1.9e-111 407.1 528 42.2
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 2.5e-111 406.8 526 42.4
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 5.6e-111 405.6 531 42.6
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 9.6e-111 404.8 523 42.8
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 1.6e-110 404.1 523 43.2
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 2.1e-110 403.7 538 42.8
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 2.1e-110 403.7 523 42.1
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.1e-109 401.4 487 43.3
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 1.1e-109 401.4 554 39.9
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 1.8e-109 400.6 540 40.2
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 4.0e-109 399.4 538 41.3
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 5.2e-109 399.1 497 43.1
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 1.2e-108 397.9 529 41.2
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 7.6e-108 395.2 532 41.9
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 9.9e-108 394.8 530 40.6
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 2.2e-107 393.7 526 42.2
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 4.9e-107 392.5 529 41.6
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.4e-106 390.2 520 42.3
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 2.3e-104 383.6 534 41.4
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 6.6e-104 382.1 512 42.2
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 7.3e-103 378.6 528 41.1
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 2.1e-102 377.1 487 41.9
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.1e-101 374.8 516 42.1
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 6.9e-101 372.1 625 37.1
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 9.9e-100 368.2 481 43.7
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 1.2e-97 361.3 578 37.7
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.0e-96 358.2 469 42.9
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 1.1e-93 348.2 758 31.8
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 1.4e-93 347.8 527 39.1
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 4.5e-92 342.8 375 45.9
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 2.9e-91 340.1 522 37.4
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.6e-89 334.3 530 37.4
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 9.6e-79 298.5 525 36.2
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 2.8e-70 270.4 523 35.2
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 3.6e-65 253.4 464 35.3
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 2.0e-63 247.7 262 46.2
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 3.3e-63 246.9 347 40.9
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 6.3e-62 242.7 261 45.6
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 1.1e-61 241.9 293 42.3
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 7.0e-53 212.6 268 45.9
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 2.0e-52 211.1 257 47.9
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 1.4e-48 198.4 267 43.8
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.6e-47 194.1 204 44.1
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 2.6e-47 194.1 423 32.4
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 2.2e-46 191.0 487 29.6
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.2e-46 191.0 318 36.2
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 7.0e-45 186.0 257 42.8
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 2.9e-43 180.6 183 48.6
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 1.4e-40 171.8 295 35.9
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.0e-39 167.9 252 38.5
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 1.6e-33 148.3 436 30.0
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.1e-29 134.0 194 41.8
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 2.8e-25 120.9 300 29.7
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 1.0e-24 119.0 124 48.4
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 9.8e-23 112.5 123 43.1
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 2.7e-20 104.4 579 24.4
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 1.0e-11 75.9 71 45.1
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 5.0e-11 73.6 377 25.5
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 1.2e-09 68.9 71 47.9
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 1.2e-09 68.9 71 47.9
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 1.2e-09 68.9 71 47.9
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 4.9e-06 57.0 105 40.0


User provided reference genes

Program Settings