Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 3.9e-131 471.5 237 100.0
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 5.0e-38 162.2 168 50.6
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 7.1e-32 141.7 169 43.2
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.2e-31 141.0 193 39.9
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.6e-31 140.6 166 45.2
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.1e-31 140.2 168 45.8
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 2.7e-31 139.8 178 41.0
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 6.0e-31 138.7 167 44.3
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.0e-30 137.9 185 41.6
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.3e-30 137.5 169 42.0
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.3e-30 137.5 168 42.3
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 1.7e-30 137.1 167 42.5
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 5.1e-30 135.6 147 45.6
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 5.1e-30 135.6 142 43.7
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 5.1e-30 135.6 133 48.9
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 6.6e-30 135.2 182 41.2
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 6.6e-30 135.2 134 47.8
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 8.6e-30 134.8 142 44.4
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 1.1e-29 134.4 168 42.9
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.1e-29 134.4 142 43.7
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 1.1e-29 134.4 133 48.1
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.5e-29 134.0 183 39.9
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 1.9e-29 133.7 195 37.9
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.9e-29 133.7 145 43.4
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.9e-29 133.7 167 41.3
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 2.5e-29 133.3 142 43.7
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 2.5e-29 133.3 189 40.7
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 3.3e-29 132.9 135 47.4
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 4.3e-29 132.5 136 44.1
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 5.6e-29 132.1 176 40.9
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 5.6e-29 132.1 177 39.5
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 7.3e-29 131.7 158 43.0
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 9.5e-29 131.3 171 39.2
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 9.5e-29 131.3 135 45.9
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 9.5e-29 131.3 170 39.4
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.2e-28 131.0 134 46.3
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.2e-28 131.0 142 43.7
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 1.6e-28 130.6 169 41.4
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 1.6e-28 130.6 179 38.0
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 2.1e-28 130.2 151 41.7
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 2.1e-28 130.2 151 41.7
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 2.1e-28 130.2 142 43.7
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 2.1e-28 130.2 147 44.2
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 2.1e-28 130.2 142 45.1
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 2.1e-28 130.2 204 39.2
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 2.8e-28 129.8 193 39.9
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 2.8e-28 129.8 194 37.1
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.8e-28 129.8 194 37.1
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 2.8e-28 129.8 194 37.1
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 2.8e-28 129.8 152 42.8
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 2.8e-28 129.8 158 42.4
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 3.6e-28 129.4 221 36.7
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 4.7e-28 129.0 134 47.8
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 6.2e-28 128.6 134 45.5
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 6.2e-28 128.6 195 39.5
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 6.2e-28 128.6 147 43.5
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 8.1e-28 128.3 170 40.6
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.1e-27 127.9 183 38.3
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.4e-27 127.5 134 44.8
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 1.8e-27 127.1 165 41.2
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.3e-27 126.7 151 41.7
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 3.1e-27 126.3 145 42.1
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 3.1e-27 126.3 176 38.1
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 4.0e-27 125.9 150 41.3
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 5.2e-27 125.6 187 38.0
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 6.8e-27 125.2 142 45.1
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.2e-26 124.4 175 38.3
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.2e-26 124.4 109 48.6
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 1.5e-26 124.0 155 39.4
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 2.0e-26 123.6 134 42.5
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 2.6e-26 123.2 184 39.1
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 3.4e-26 122.9 158 42.4
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 4.4e-26 122.5 122 46.7
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 4.4e-26 122.5 148 43.2
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 4.4e-26 122.5 118 48.3
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 5.8e-26 122.1 133 43.6
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 7.6e-26 121.7 159 41.5
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 7.6e-26 121.7 133 44.4
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 1.7e-25 120.6 135 43.7
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 2.2e-25 120.2 143 43.4
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.9e-25 119.8 170 40.6
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 4.9e-25 119.0 147 40.8
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 4.9e-25 119.0 146 43.2
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 4.9e-25 119.0 213 39.4
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 8.3e-25 118.2 147 40.8
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 8.3e-25 118.2 134 42.5
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 8.3e-25 118.2 159 42.8
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.5e-23 112.8 153 39.9
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 4.6e-23 112.5 124 42.7
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 1.0e-22 111.3 142 42.3
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 3.9e-22 109.4 169 39.6
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 5.1e-22 109.0 180 36.7
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 6.6e-22 108.6 210 34.8
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 3.3e-21 106.3 83 49.4
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 5.6e-21 105.5 109 45.0
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 7.3e-21 105.1 163 41.7
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.2e-18 97.8 192 34.4
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 2.0e-18 97.1 165 35.8
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 2.9e-17 93.2 95 44.2
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 4.2e-16 89.4 106 41.5
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 7.1e-16 88.6 70 51.4
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 1.0e-14 84.7 122 36.9
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 7.3e-13 78.6 80 47.5
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 7.3e-13 78.6 80 46.2
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 5.8e-10 68.9 110 40.9
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 7.6e-10 68.6 70 45.7
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.9e-08 63.9 99 37.4
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 4.6e-07 59.3 58 51.7


User provided reference genes

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