Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.3e-67 258.1 117 100.0
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.2e-58 228.8 116 85.3
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 2.9e-55 218.4 114 82.5
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.1e-49 199.9 114 75.4
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.4e-49 198.7 114 75.4
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 1.6e-48 196.1 113 76.1
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 5.9e-48 194.1 113 76.1
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 7.7e-48 193.7 117 75.2
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 1.0e-47 193.4 113 75.2
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.0e-47 193.4 113 75.2
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.3e-47 193.0 113 75.2
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.3e-47 193.0 113 74.3
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.7e-47 192.6 113 75.2
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 75.2
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 75.2
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 75.2
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 75.2
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 75.2
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 75.2
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 75.2
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 74.3
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.2e-47 192.2 113 74.3
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 73.5
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 75.2
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 74.3
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 73.5
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 74.3
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 75.2
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 74.3
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 75.2
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 2.9e-47 191.8 113 74.3
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 3.8e-47 191.4 113 74.3
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 3.8e-47 191.4 113 74.3
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 3.8e-47 191.4 113 74.3
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 3.8e-47 191.4 113 74.3
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 3.8e-47 191.4 113 73.5
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 74.3
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 73.5
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 74.3
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 73.5
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 73.5
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 73.5
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 73.5
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 73.5
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 5.0e-47 191.0 112 75.0
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 74.3
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 74.3
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 74.3
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 5.0e-47 191.0 113 73.5
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 6.5e-47 190.7 113 73.5
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 6.5e-47 190.7 113 73.5
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 6.5e-47 190.7 113 73.5
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 6.5e-47 190.7 113 73.5
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 6.5e-47 190.7 113 73.5
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 6.5e-47 190.7 113 73.5
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 6.5e-47 190.7 113 73.5
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 6.5e-47 190.7 99 81.8
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 6.5e-47 190.7 113 73.5
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 8.5e-47 190.3 113 74.3
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 8.5e-47 190.3 113 73.5
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 74.3
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 73.5
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 72.6
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 73.5
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 73.5
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 74.3
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 72.6
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 72.6
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 74.3
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.1e-46 189.9 113 73.5
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.5e-46 189.5 113 72.6
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 1.5e-46 189.5 113 72.6
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.5e-46 189.5 113 73.5
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 1.5e-46 189.5 113 74.3
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 1.5e-46 189.5 113 72.6
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.5e-46 189.5 113 74.3
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.9e-46 189.1 113 73.5
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.9e-46 189.1 113 73.5
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 1.9e-46 189.1 113 73.5
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.9e-46 189.1 113 73.5
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.5e-46 188.7 113 72.6
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.5e-46 188.7 113 73.5
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.5e-46 188.7 113 72.6
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 3.2e-46 188.3 113 71.7
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 3.2e-46 188.3 113 72.6
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 3.2e-46 188.3 112 75.0
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 3.2e-46 188.3 113 72.6
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 3.2e-46 188.3 113 72.6
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 3.2e-46 188.3 113 72.6
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 3.2e-46 188.3 113 72.6
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 4.2e-46 188.0 113 72.6
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 4.2e-46 188.0 113 72.6
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 7.2e-46 187.2 113 71.7
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 9.4e-46 186.8 113 72.6
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 9.4e-46 186.8 113 72.6
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 9.4e-46 186.8 113 72.6
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 1.2e-45 186.4 113 74.3
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.2e-45 186.4 113 71.7
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 2.1e-45 185.7 113 71.7
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.1e-45 185.7 121 71.1
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.7e-45 185.3 113 70.8
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.6e-45 184.9 113 70.8
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 4.7e-45 184.5 113 70.8
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 4.7e-45 184.5 113 71.7
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 4.7e-45 184.5 113 70.8
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 8.0e-45 183.7 109 73.4
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-44 182.6 113 69.9
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 5.2e-44 181.0 113 71.7
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 8.8e-44 180.3 113 69.0
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 2.6e-43 178.7 113 72.6
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 2.2e-42 175.6 112 67.0
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.2e-42 175.6 112 67.0
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 6.3e-42 174.1 113 65.5
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.3e-42 174.1 113 65.5
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 8.3e-42 173.7 114 67.5
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.8e-41 172.6 106 72.6
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 4.1e-41 171.4 113 69.0
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 5.4e-41 171.0 104 72.1
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 7.0e-41 170.6 104 71.2
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 7.0e-41 170.6 104 71.2
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.6e-40 169.5 113 65.5
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.0e-40 169.1 113 66.4
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.0e-40 169.1 113 66.4
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.5e-40 167.9 113 63.7
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 7.7e-40 167.2 104 69.2
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 1.0e-39 166.8 113 65.5
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.8e-39 164.9 130 56.9
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 1.4e-36 156.4 97 72.2
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 5.7e-35 151.0 97 72.2
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 1.2e-32 143.3 78 83.3
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 8.6e-31 137.1 82 69.5
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 6.4e-26 120.9 65 86.2
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 4.7e-21 104.8 60 80.0
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.1e-16 89.4 111 40.5


User provided reference genes

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