Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0071 Selaginella moellendorffii HOM05D008409 ORTHO05D010483 5.6e-161 570.9 281 100.0
PGR142G1945 Punica granatum HOM05D008409 ORTHO05D010483 3.7e-11 73.2 135 34.8
AagrBONN_evm.TU.Sc2ySwM_228.4478 Anthoceros agrestis HOM05D008409 ORTHO05D010483 8.1e-11 72.0 148 33.1
SEGI_00232 Sequoiadendron giganteum HOM05D008409 ORTHO05D010483 3.1e-10 70.1 149 32.2
Nn1g06548 Nelumbo nucifera HOM05D008409 ORTHO05D010483 9.0e-10 68.6 135 31.1
Aqoxy1G02429 Aquilegia oxysepala HOM05D008409 ORTHO05D010483 2.0e-09 67.4 137 28.5
Peaxi162Scf00059g01918 Petunia axillaris HOM05D008409 ORTHO05D010483 3.4e-09 66.6 135 31.1
Eucgr.C02279 Eucalyptus grandis HOM05D000116 ORTHO05D000703 4.5e-09 66.2 74 39.2
BcaB05g22845 Brassica carinata HOM05D000116 ORTHO05D000703 5.8e-09 65.9 74 37.8
Actinidia11031 Actinidia chinensis HOM05D008409 ORTHO05D010483 7.6e-09 65.5 131 29.8
AagrBONN_evm.TU.Sc2ySwM_228.4343 Anthoceros agrestis HOM05D000197 ORTHO05D000114 7.6e-09 65.5 200 26.5
ECA236G4191 Erigeron canadensis HOM05D000116 ORTHO05D000703 7.6e-09 65.5 86 36.0
Sabra13G0110600 Salix brachista HOM05D008409 ORTHO05D010483 7.6e-09 65.5 131 29.8
PGSC0003DMG400013143 Solanum tuberosum HOM05D008409 ORTHO05D010483 7.6e-09 65.5 150 29.3
PGSC0003DMG400008049 Solanum tuberosum HOM05D000116 ORTHO05D000703 1.3e-08 64.7 74 36.5
Solyc11g069860.3 Solanum lycopersicum HOM05D000116 ORTHO05D000703 2.2e-08 63.9 74 36.5
Sopen10g004190 Solanum pennellii HOM05D008409 ORTHO05D010483 2.2e-08 63.9 152 28.3
Sopen11g028420 Solanum pennellii HOM05D000116 ORTHO05D000703 2.2e-08 63.9 74 36.5
vmacro13100 Vaccinium macrocarpon HOM05D000116 ORTHO05D000703 2.2e-08 63.9 74 37.8
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 3.8e-08 63.2 74 37.8
Potri.013G131000 Populus trichocarpa HOM05D008409 ORTHO05D010483 3.8e-08 63.2 131 29.8
CSS0010326 Camellia sinensis var. sinensis HOM05D000116 ORTHO05D000703 4.9e-08 62.8 74 37.8
CSS0034533 Camellia sinensis var. sinensis HOM05D000116 ORTHO05D000703 4.9e-08 62.8 74 37.8
CSS0046074 Camellia sinensis var. sinensis HOM05D000116 ORTHO05D000703 4.9e-08 62.8 74 37.8
MELO3C018733.2 Cucumis melo HOM05D008409 ORTHO05D010483 4.9e-08 62.8 131 30.5
MBI16_g39221_MAGBIO Magnolia biondii HOM05D000116 ORTHO05D000703 4.9e-08 62.8 93 34.4
TWI36G0630 Tripterygium wilfordii HOM05D008409 ORTHO05D010483 4.9e-08 62.8 133 30.8
CAN.G631.52 Capsicum annuum HOM05D000116 ORTHO05D000703 6.4e-08 62.4 74 35.1
Thhalv10014993m.g Eutrema salsugineum HOM05D000116 ORTHO05D000703 6.4e-08 62.4 98 31.6
Nitab4.5_0002461g0050 Nicotiana tabacum HOM05D000116 ORTHO05D000703 6.4e-08 62.4 74 36.5
Nitab4.5_0004479g0030 Nicotiana tabacum HOM05D000116 ORTHO05D000703 6.4e-08 62.4 74 36.5
CsaV3_7G004460 Cucumis sativus L. HOM05D008409 ORTHO05D010483 8.4e-08 62.0 131 31.3
A02p06270 Brassica napus HOM05D000116 ORTHO05D000703 1.1e-07 61.6 127 31.5
BNapus_Darmor_BZH_scaffold_38p01570 Brassica napus HOM05D000116 ORTHO05D000703 1.1e-07 61.6 127 31.5
BraA02t05575Z Brassica rapa HOM05D000116 ORTHO05D000703 1.1e-07 61.6 127 31.5
CiPaw.04G126300 Carya illinoinensis HOM05D008409 ORTHO05D010483 1.1e-07 61.6 131 29.8
ClCG07G002880 Citrullus lanatus HOM05D008409 ORTHO05D010483 1.1e-07 61.6 131 30.5
Cc06_g12910 Coffea canephora HOM05D000116 ORTHO05D000703 1.1e-07 61.6 125 26.4
PSO384G1252 Papaver somniferum HOM05D000116 ORTHO05D000703 1.1e-07 61.6 74 40.5
Sc18g0003900 Simmondsia chinensis HOM05D000116 ORTHO05D000703 1.1e-07 61.6 74 36.5
Thecc.09G191800 Theobroma cacao HOM05D000116 ORTHO05D000703 1.1e-07 61.6 107 31.8
BcaC03g13768 Brassica carinata HOM05D000116 ORTHO05D000703 1.4e-07 61.2 74 33.8
BolC2t07044H Brassica oleracea HOM05D000116 ORTHO05D000703 1.4e-07 61.2 74 33.8
Haze_13167 Corylus avellana HOM05D008409 ORTHO05D010483 1.4e-07 61.2 131 29.0
Dinv25481 Davidia involucrata HOM05D000116 ORTHO05D000703 1.4e-07 61.2 74 35.1
Nitab4.5_0009473g0020 Nicotiana tabacum HOM05D008409 ORTHO05D010483 1.4e-07 61.2 152 28.9
PSO713G0016 Papaver somniferum HOM05D000116 ORTHO05D000703 1.4e-07 61.2 74 40.5
Sed0018099 Sechium edule HOM05D008409 ORTHO05D010483 1.4e-07 61.2 131 29.8
Aqoxy7G02536 Aquilegia oxysepala HOM05D000116 ORTHO05D000703 1.9e-07 60.8 74 37.8
BcaC04g19436 Brassica carinata HOM05D000116 ORTHO05D000703 1.9e-07 60.8 77 35.1
Gorai.012G128600 Gossypium raimondii HOM05D008409 ORTHO05D010483 1.9e-07 60.8 136 28.7
Gohir.A04G103600 Gossypium hirsutum HOM05D008409 ORTHO05D010483 2.4e-07 60.5 136 28.7
Pp3c2_27350 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.4e-07 60.5 150 29.3
Actinidia15014 Actinidia chinensis HOM05D000197 ORTHO05D000114 3.2e-07 60.1 116 33.6
AUR62027444 Chenopodium quinoa HOM05D000116 ORTHO05D000703 3.2e-07 60.1 74 37.8
Gohir.D04G143000 Gossypium hirsutum HOM05D008409 ORTHO05D010483 3.2e-07 60.1 136 28.7
TWI32G0584 Tripterygium wilfordii HOM05D000116 ORTHO05D000703 3.2e-07 60.1 74 36.5
TWI32G1256 Tripterygium wilfordii HOM05D000116 ORTHO05D000703 3.2e-07 60.1 74 36.5
TAR627G0101 Trochodendron aralioides HOM05D008409 ORTHO05D010483 3.2e-07 60.1 127 29.1
GSVIVG01029260001 Vitis vinifera HOM05D000116 ORTHO05D000703 3.2e-07 60.1 82 32.9
C09p55710 Brassica napus HOM05D000116 ORTHO05D000703 5.5e-07 59.3 74 35.1
HanXRQChr14g0441541 Helianthus annuus HOM05D000116 ORTHO05D000703 5.5e-07 59.3 79 34.2
Manes.06G000500 Manihot esculenta HOM05D000116 ORTHO05D000703 5.5e-07 59.3 74 36.5
A10p19510 Brassica napus HOM05D000116 ORTHO05D000703 7.1e-07 58.9 74 35.1
BolC9t58437H Brassica oleracea HOM05D000116 ORTHO05D000703 7.1e-07 58.9 74 35.1
BraA10t44027Z Brassica rapa HOM05D000116 ORTHO05D000703 7.1e-07 58.9 74 35.1
CARHR192310 Cardamine hirsuta HOM05D000116 ORTHO05D000703 7.1e-07 58.9 74 33.8
Gohir.D08G091300 Gossypium hirsutum HOM05D000116 ORTHO05D000703 7.1e-07 58.9 74 35.1
SEGI_10129 Sequoiadendron giganteum HOM05D000116 ORTHO05D000703 7.1e-07 58.9 89 36.0
Solyc10g008330.4 Solanum lycopersicum HOM05D008409 ORTHO05D010483 7.1e-07 58.9 152 27.6
ClCG06G013850 Citrullus lanatus HOM05D000116 ORTHO05D000703 9.3e-07 58.5 74 36.5
Gorai.004G096800 Gossypium raimondii HOM05D000116 ORTHO05D000703 9.3e-07 58.5 74 35.1
QL08p038864 Quercus lobata HOM05D008409 ORTHO05D010483 9.3e-07 58.5 131 27.5
GSVIVG01020550001 Vitis vinifera HOM05D008409 ORTHO05D010483 9.3e-07 58.5 121 27.3
MSTRG.11468 Avicennia marina HOM05D000116 ORTHO05D000703 1.2e-06 58.2 86 34.9
HanXRQChr07g0191291 Helianthus annuus HOM05D000116 ORTHO05D000703 1.2e-06 58.2 82 34.1
SalBow6G6504 Salvia bowleyana HOM05D000116 ORTHO05D000703 1.2e-06 58.2 74 36.5
Aa31LG1G14170 Aethionema arabicum HOM05D000116 ORTHO05D000703 1.6e-06 57.8 126 28.6
Aqoxy6G02427 Aquilegia oxysepala HOM05D000116 ORTHO05D000703 1.6e-06 57.8 90 33.3
AT5G20500 Arabidopsis thaliana HOM05D000116 ORTHO05D000703 1.6e-06 57.8 74 32.4
AUR62030943 Chenopodium quinoa HOM05D000116 ORTHO05D000703 1.6e-06 57.8 100 31.0
Sed0012113 Sechium edule HOM05D000116 ORTHO05D000703 1.6e-06 57.8 74 36.5
AUR62031257 Chenopodium quinoa HOM05D000116 ORTHO05D000703 2.1e-06 57.4 74 36.5
MD09G1247200 Malus domestica HOM05D008409 ORTHO05D010483 2.1e-06 57.4 137 27.0
Nn3g16816 Nelumbo nucifera HOM05D000116 ORTHO05D000703 2.1e-06 57.4 95 33.7
Nn5g28750 Nelumbo nucifera HOM05D000116 ORTHO05D000703 2.1e-06 57.4 74 35.1
Sp7g01560 Schrenkiella parvula HOM05D000116 ORTHO05D000703 2.1e-06 57.4 83 34.9
ECA238G4514 Erigeron canadensis HOM05D000116 ORTHO05D000703 2.7e-06 57.0 78 30.8
Lsat_1_v5_gn_8_68860 Lactuca sativa HOM05D000116 ORTHO05D000703 2.7e-06 57.0 82 34.1
Thecc.03G014900 Theobroma cacao HOM05D000116 ORTHO05D000703 2.7e-06 57.0 90 31.1
CDE12G0241 Ceratophyllum demersum HOM05D000116 ORTHO05D000703 3.5e-06 56.6 88 34.1
Haze_07530 Corylus avellana HOM05D000116 ORTHO05D000703 3.5e-06 56.6 99 31.3
MELO3C017411.2 Cucumis melo HOM05D000116 ORTHO05D000703 3.5e-06 56.6 74 35.1
DCAR_020140 Daucus carota HOM05D000116 ORTHO05D000703 3.5e-06 56.6 86 29.1
Lj6g0003697 Lotus japonicus HOM05D000116 ORTHO05D000703 3.5e-06 56.6 83 33.7
Sp6g23960 Schrenkiella parvula HOM05D000116 ORTHO05D000703 3.5e-06 56.6 74 32.4
Sed0027181 Sechium edule HOM05D000116 ORTHO05D000703 3.5e-06 56.6 74 36.5
TPR.G32609 Trifolium pratense HOM05D000116 ORTHO05D000703 3.5e-06 56.6 83 34.9
HPP92_021960 Vanilla planifolia HOM05D000116 ORTHO05D000703 3.5e-06 56.6 74 36.5
HPP92_021995 Vanilla planifolia HOM05D000116 ORTHO05D000703 3.5e-06 56.6 74 36.5
VMungo1309G2563 Vigna mungo HOM05D000116 ORTHO05D000703 3.5e-06 56.6 118 28.8
CANSAT01G2935 Cannabis sativa HOM05D000116 ORTHO05D000703 4.6e-06 56.2 74 37.8
Lalb_Chr16g0377711 Lupinus albus HOM05D000116 ORTHO05D000703 4.6e-06 56.2 78 34.6
Manes.12G089218 Manihot esculenta HOM05D008409 ORTHO05D010483 4.6e-06 56.2 132 26.5
Medtr3g077570 Medicago truncatula HOM05D000116 ORTHO05D000703 4.6e-06 56.2 96 32.3
QL10p008965 Quercus lobata HOM05D000116 ORTHO05D000703 4.6e-06 56.2 91 31.9
QL10p010254 Quercus lobata HOM05D000116 ORTHO05D000703 4.6e-06 56.2 91 31.9
SGA_v2.0_scaffold17G07946 Striga asiatica HOM05D000116 ORTHO05D000703 4.6e-06 56.2 74 35.1
THA.LOC104821478 Tarenaya hassleriana HOM05D000116 ORTHO05D000703 4.6e-06 56.2 90 31.1
TPR.G25987 Trifolium pratense HOM05D000116 ORTHO05D000703 4.6e-06 56.2 88 35.2
AL6G32030 Arabidopsis lyrata HOM05D000116 ORTHO05D000703 6.0e-06 55.8 74 31.1
CSS0027383 Camellia sinensis var. sinensis HOM05D000116 ORTHO05D000703 6.0e-06 55.8 87 32.2
COL.COLO4_21981 Corchorus olitorius HOM05D000116 ORTHO05D000703 6.0e-06 55.8 87 33.3
CsaV3_1G008620 Cucumis sativus L. HOM05D000116 ORTHO05D000703 6.0e-06 55.8 91 35.2
CsaV3_1G032050 Cucumis sativus L. HOM05D000116 ORTHO05D000703 6.0e-06 55.8 74 35.1
Duzib187G0705 Durio zibethinus HOM05D000116 ORTHO05D000703 6.0e-06 55.8 93 33.3
Lsat_1_v5_gn_2_78261 Lactuca sativa HOM05D000116 ORTHO05D000703 6.0e-06 55.8 78 32.1
Oeu009079.1 Olea europaea HOM05D000116 ORTHO05D000703 6.0e-06 55.8 74 35.1
Sabra15G0103400 Salix brachista HOM05D000116 ORTHO05D000703 6.0e-06 55.8 91 31.9
SMO141G0292 Selaginella moellendorffii HOM05D000322 ORTHO05D010483 6.0e-06 55.8 112 30.4
THA.LOC104811005 Tarenaya hassleriana HOM05D000116 ORTHO05D000703 6.0e-06 55.8 98 29.6
TWI09G0031 Tripterygium wilfordii HOM05D000116 ORTHO05D000703 6.0e-06 55.8 103 32.0
CANSAT80G2761 Cannabis sativa HOM05D000116 ORTHO05D000703 7.9e-06 55.5 92 31.5
Gohir.A08G081900 Gossypium hirsutum HOM05D000116 ORTHO05D000703 7.9e-06 55.5 74 32.4
Oeu052801.1 Olea europaea HOM05D000116 ORTHO05D000703 7.9e-06 55.5 74 35.1
Pp3c18_5670 Physcomitrium patens HOM05D000116 ORTHO05D000703 7.9e-06 55.5 74 33.8


User provided reference genes

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