Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0066 Selaginella moellendorffii HOM05D001620 ORTHO05D005461 5.8e-144 514.2 262 100.0
SMO347G0172 Selaginella moellendorffii HOM05D001620 ORTHO05D003132 5.6e-22 109.0 169 34.9
Prupe.1G201600 Prunus persica HOM05D001620 ORTHO05D005461 6.2e-13 79.0 192 27.6
SMO347G0380 Selaginella moellendorffii HOM05D001620 ORTHO05D003132 1.8e-12 77.4 193 26.9
Lsat_1_v5_gn_3_109820 Lactuca sativa HOM05D001620 ORTHO05D005461 6.9e-12 75.5 164 31.1
Hund03188 Selenicereus undatus HOM05D001620 ORTHO05D005461 1.2e-11 74.7 198 29.8
Ciclev10021852m.g Citrus clementina HOM05D001620 ORTHO05D005461 1.5e-11 74.3 177 29.9
Potri.007G134300 Populus trichocarpa HOM05D001620 ORTHO05D005461 2.6e-11 73.6 173 32.4
arahy.Tifrunner.gnm1.ann1.G0W8DL Arachis hypogaea HOM05D001620 ORTHO05D005461 4.4e-11 72.8 204 28.9
Dinv44168 Davidia involucrata HOM05D001620 ORTHO05D005461 5.8e-11 72.4 199 27.6
Sc19g0002780 Simmondsia chinensis HOM05D001620 ORTHO05D005461 3.8e-10 69.7 220 28.6
SalBow6G2343 Salvia bowleyana HOM05D001620 ORTHO05D005461 6.4e-10 68.9 165 27.9
GSVIVG01017048001 Vitis vinifera HOM05D002908 ORTHO05D009379 5.4e-09 65.9 144 33.3
MSTRG.22018 Avicennia marina HOM05D001620 ORTHO05D005461 9.3e-09 65.1 165 26.7
Migut.N03083 Erythranthe guttata HOM05D001620 ORTHO05D005461 1.2e-08 64.7 165 27.9
SEGI_13321 Sequoiadendron giganteum HOM05D001620 ORTHO05D003132 2.1e-08 63.9 93 37.6
Manes.11G127400 Manihot esculenta HOM05D001620 ORTHO05D005461 2.7e-08 63.5 84 44.0
Aqoxy7G01536 Aquilegia oxysepala HOM05D002908 ORTHO05D009379 7.8e-08 62.0 183 28.4
unitig_85.g27224 Utricularia gibba HOM05D004939 ORTHO05D005843 1.7e-07 60.8 162 29.0
GSVIVG01023856001 Vitis vinifera HOM05D001620 ORTHO05D005461 2.3e-07 60.5 176 29.0
Sabra07G0109000 Salix brachista HOM05D001620 ORTHO05D005461 3.0e-07 60.1 116 36.2
Actinidia22372 Actinidia chinensis HOM05D001620 ORTHO05D003132 3.9e-07 59.7 104 34.6
Sed0006894 Sechium edule HOM05D001620 ORTHO05D003132 3.9e-07 59.7 139 28.8
EL10Ac3g06031 Beta vulgaris HOM05D001620 ORTHO05D005461 5.1e-07 59.3 94 39.4
Aqoxy366s001 Aquilegia oxysepala HOM05D002908 ORTHO05D009379 6.6e-07 58.9 155 28.4
CANSAT54G0752 Cannabis sativa HOM05D001620 ORTHO05D005461 8.7e-07 58.5 95 38.9
MELO3C020598.2 Cucumis melo HOM05D001620 ORTHO05D003132 1.5e-06 57.8 92 40.2
CsaV3_1G034610 Cucumis sativus L. HOM05D001620 ORTHO05D003132 1.9e-06 57.4 92 39.1
CsaV3_1G035710 Cucumis sativus L. HOM05D001620 ORTHO05D003132 1.9e-06 57.4 92 39.1
PSO675G1501 Papaver somniferum HOM05D001620 ORTHO05D005461 1.9e-06 57.4 176 27.3
AT1G62350 Arabidopsis thaliana HOM05D001620 ORTHO05D003132 2.5e-06 57.0 93 34.4
MELO3C015110.2 Cucumis melo HOM05D001620 ORTHO05D003132 2.5e-06 57.0 139 29.5
Medtr1g031110 Medicago truncatula HOM05D001620 ORTHO05D003132 2.5e-06 57.0 142 26.1
Medtr4g064917 Medicago truncatula HOM05D001620 ORTHO05D003132 2.5e-06 57.0 185 26.5
PSO541G2761 Papaver somniferum HOM05D001620 ORTHO05D005461 2.5e-06 57.0 176 27.8
Hund11612 Selenicereus undatus HOM05D001620 ORTHO05D003132 2.5e-06 57.0 139 26.6
Haze_01957 Corylus avellana HOM05D001620 ORTHO05D005461 3.3e-06 56.6 163 27.6
ECA238G3542 Erigeron canadensis HOM05D001620 ORTHO05D003132 3.3e-06 56.6 83 34.9
Eucgr.A00034 Eucalyptus grandis HOM05D001620 ORTHO05D005461 3.3e-06 56.6 165 27.3
MD11G1184600 Malus domestica HOM05D001620 ORTHO05D003132 3.3e-06 56.6 92 34.8
Medtr3g079890 Medicago truncatula HOM05D001620 ORTHO05D003132 3.3e-06 56.6 142 26.1
PGR102G0575 Punica granatum HOM05D001620 ORTHO05D003132 3.3e-06 56.6 92 37.0
Sed0016023 Sechium edule HOM05D001620 ORTHO05D003132 3.3e-06 56.6 106 38.7
SEGI_06390 Sequoiadendron giganteum HOM05D001620 ORTHO05D005461 3.3e-06 56.6 181 28.2
Cfa005393 Carpinus fangiana HOM05D001620 ORTHO05D005461 4.3e-06 56.2 188 26.6
ClCG03G001190 Citrullus lanatus HOM05D001620 ORTHO05D003132 4.3e-06 56.2 92 39.1
Migut.M01344 Erythranthe guttata HOM05D001620 ORTHO05D003132 4.3e-06 56.2 118 33.1
Mapoly0033s0149 Marchantia polymorpha HOM05D001620 ORTHO05D003132 4.3e-06 56.2 142 26.8
Oeu015935.2 Olea europaea HOM05D001620 ORTHO05D005461 4.3e-06 56.2 189 24.3
Phvul.003G032700 Phaseolus vulgaris HOM05D001620 ORTHO05D003132 4.3e-06 56.2 83 36.1
AagrBONN_evm.TU.Sc2ySwM_344.3808 Anthoceros agrestis HOM05D001620 ORTHO05D003132 5.6e-06 55.8 161 29.2
FAN27G0152 Fragaria x ananassa HOM05D001620 ORTHO05D005461 5.6e-06 55.8 182 25.8
HanXRQChr13g0419631 Helianthus annuus HOM05D001620 ORTHO05D005461 5.6e-06 55.8 172 29.7
Lj4g0021462 Lotus japonicus HOM05D001620 ORTHO05D003132 5.6e-06 55.8 185 26.5
MD04G1047000 Malus domestica HOM05D001620 ORTHO05D005461 5.6e-06 55.8 79 36.7
RcHm_v2.0_Chr6g0281221 Rosa chinensis HOM05D001620 ORTHO05D005461 5.6e-06 55.8 183 27.9
Sed0027002 Sechium edule HOM05D001620 ORTHO05D005461 5.6e-06 55.8 80 41.2
Sc06g0004700 Simmondsia chinensis HOM05D001620 ORTHO05D003132 5.6e-06 55.8 83 34.9
arahy.Tifrunner.gnm1.ann1.0C9A28 Arachis hypogaea HOM05D001620 ORTHO05D003132 7.3e-06 55.5 139 25.2
arahy.Tifrunner.gnm1.ann1.6U9V59 Arachis hypogaea HOM05D001620 ORTHO05D003132 7.3e-06 55.5 139 25.2
arahy.Tifrunner.gnm1.ann1.UZY3CQ Arachis hypogaea HOM05D001620 ORTHO05D005461 7.3e-06 55.5 90 38.9
CSS0013648 Camellia sinensis var. sinensis HOM05D001620 ORTHO05D003132 7.3e-06 55.5 78 42.3
Cc00_g03540 Coffea canephora HOM05D001620 ORTHO05D005461 7.3e-06 55.5 163 25.2
Cc09_g06110 Coffea canephora HOM05D001620 ORTHO05D003132 7.3e-06 55.5 91 35.2
CsaV3_1G043490 Cucumis sativus L. HOM05D001620 ORTHO05D003132 7.3e-06 55.5 139 28.8
CsaV3_7G002140 Cucumis sativus L. HOM05D001620 ORTHO05D005461 7.3e-06 55.5 166 27.1
Thhalv10023910m.g Eutrema salsugineum HOM05D001620 ORTHO05D003132 7.3e-06 55.5 119 30.3
FAN11G0333 Fragaria x ananassa HOM05D001620 ORTHO05D003132 7.3e-06 55.5 92 34.8
FAN15G2752 Fragaria x ananassa HOM05D001620 ORTHO05D005461 7.3e-06 55.5 182 26.9
Hma1.2p1_2359F.1_g320596 Hydrangea macrophylla HOM05D001620 ORTHO05D005461 7.3e-06 55.5 79 36.7
Hund21976 Selenicereus undatus HOM05D001620 ORTHO05D003132 7.3e-06 55.5 134 26.9
vmacro16974 Vaccinium macrocarpon HOM05D002908 ORTHO05D009379 7.3e-06 55.5 173 29.5
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 9.6e-06 55.1 173 29.5
CiPaw.05G094900 Carya illinoinensis HOM05D001620 ORTHO05D005461 9.6e-06 55.1 232 24.6
Migut.N02375 Erythranthe guttata HOM05D001620 ORTHO05D003132 9.6e-06 55.1 139 26.6
TPR.G23569 Trifolium pratense HOM05D001620 ORTHO05D003132 9.6e-06 55.1 185 25.9


User provided reference genes

Program Settings