Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 5.8e-68 260.8 131 100.0
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 8.7e-16 87.4 95 48.4
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 1.3e-14 83.6 134 38.1
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 6.3e-14 81.3 106 46.2
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 8.2e-14 80.9 136 39.0
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 1.4e-13 80.1 100 43.0
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 1.8e-13 79.7 109 46.8
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.2e-12 77.0 119 42.9
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.5e-12 76.6 119 42.9
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 5.9e-12 74.7 136 38.2
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 5.9e-12 74.7 96 45.8
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.6e-12 74.3 101 45.5
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.6e-12 74.3 106 44.3
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 1.0e-11 73.9 135 37.0
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 1.7e-11 73.2 97 48.5
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 3.8e-11 72.0 97 47.4
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 3.8e-11 72.0 134 36.6
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 6.5e-11 71.2 97 44.3
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 6.5e-11 71.2 95 41.1
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 6.5e-11 71.2 95 44.2
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 8.4e-11 70.9 96 42.7
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 8.4e-11 70.9 146 35.6
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.4e-10 70.1 96 43.8
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.4e-10 70.1 96 43.8
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 1.4e-10 70.1 140 36.4
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.4e-10 70.1 103 42.7
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 1.4e-10 70.1 94 44.7
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.4e-10 70.1 98 44.9
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 1.9e-10 69.7 99 41.4
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 1.9e-10 69.7 96 43.8
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 2.5e-10 69.3 149 36.2
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 2.5e-10 69.3 96 41.7
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 2.5e-10 69.3 96 41.7
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 3.2e-10 68.9 96 44.8
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 4.2e-10 68.6 112 39.3
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 5.5e-10 68.2 122 38.5
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 7.2e-10 67.8 96 43.8
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 9.3e-10 67.4 93 43.0
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 9.3e-10 67.4 114 43.0
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 1.2e-09 67.0 97 45.4
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 2.7e-09 65.9 96 42.7
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 2.7e-09 65.9 134 34.3
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 3.5e-09 65.5 90 47.8
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 3.5e-09 65.5 109 38.5
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 3.5e-09 65.5 117 39.3
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 3.5e-09 65.5 92 44.6
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 4.6e-09 65.1 113 37.2
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.9e-09 64.3 87 42.5
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 7.9e-09 64.3 99 41.4
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 7.9e-09 64.3 101 37.6
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 7.9e-09 64.3 89 42.7
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 7.9e-09 64.3 75 44.0
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 7.9e-09 64.3 145 37.2
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 1.0e-08 63.9 132 35.6
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 1.0e-08 63.9 146 34.9
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 1.0e-08 63.9 124 36.3
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 1.0e-08 63.9 111 40.5
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 1.0e-08 63.9 136 34.6
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 1.8e-08 63.2 96 40.6
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 1.8e-08 63.2 127 37.8
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 2.3e-08 62.8 94 40.4
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 2.3e-08 62.8 69 46.4
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.0e-08 62.4 83 43.4
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 3.0e-08 62.4 124 35.5
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 3.0e-08 62.4 85 43.5
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 3.9e-08 62.0 99 41.4
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 3.9e-08 62.0 111 36.9
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 3.9e-08 62.0 137 36.5
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 6.7e-08 61.2 97 40.2
Pp3c20_18310 Physcomitrium patens HOM05D053615 ORTHO05D007309 6.7e-08 61.2 90 43.3
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 1.5e-07 60.1 125 34.4
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.5e-07 60.1 75 48.0
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.5e-07 60.1 145 31.7
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 3.3e-07 58.9 137 32.8
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 4.3e-07 58.5 108 36.1
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 5.7e-07 58.2 105 40.0
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 7.4e-07 57.8 120 35.8
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 7.4e-07 57.8 137 32.8
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 1.3e-06 57.0 102 38.2
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 1.3e-06 57.0 102 38.2
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 1.6e-06 56.6 100 36.0
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.6e-06 56.6 123 35.8
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.6e-06 56.6 123 35.8
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 2.2e-06 56.2 105 33.3
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 2.2e-06 56.2 102 38.2
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 2.8e-06 55.8 103 36.9
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 2.8e-06 55.8 102 37.3
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 2.8e-06 55.8 130 34.6
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 2.8e-06 55.8 97 37.1
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 4.8e-06 55.1 103 35.9
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 8.2e-06 54.3 106 35.8
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 8.2e-06 54.3 104 37.5


User provided reference genes

Program Settings