Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 6.7e-99 364.0 182 100.0
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 9.2e-56 220.7 177 60.5
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 7.3e-53 211.1 150 68.0
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 3.6e-52 208.8 178 55.1
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 2.6e-50 202.6 174 58.0
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 7.5e-50 201.1 197 52.3
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 7.0e-48 194.5 179 54.2
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 7.8e-47 191.0 177 52.5
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 6.6e-46 188.0 176 54.5
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 6.6e-46 188.0 176 54.5
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 1.5e-45 186.8 176 54.0
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 1.9e-45 186.4 178 53.9
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 1.6e-44 183.3 175 52.6
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 1.4e-43 180.3 138 60.1
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 6.8e-43 177.9 174 51.1
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 9.8e-42 174.1 176 50.0
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 2.9e-41 172.6 174 50.6
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 3.7e-41 172.2 174 50.6
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 4.9e-41 171.8 175 48.0
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 8.3e-41 171.0 174 51.1
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 1.1e-40 170.6 176 47.2
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 1.4e-40 170.2 174 48.3
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 1.9e-40 169.9 176 47.2
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 1.9e-40 169.9 177 49.7
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 2.4e-40 169.5 174 48.3
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 2.4e-40 169.5 176 47.2
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 2.4e-40 169.5 176 47.2
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 2.4e-40 169.5 174 52.3
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 1.6e-39 166.8 174 47.7
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 2.1e-39 166.4 174 48.9
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 3.5e-39 165.6 174 47.7
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 4.6e-39 165.2 174 47.7
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 6.0e-39 164.9 174 47.7
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 7.8e-39 164.5 177 49.7
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 1.0e-38 164.1 174 47.7
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 1.0e-38 164.1 174 48.9
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 1.3e-38 163.7 174 48.3
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.7e-38 163.3 174 47.7
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 2.3e-38 162.9 174 47.7
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 2.3e-38 162.9 176 46.0
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 3.0e-38 162.5 174 46.0
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 3.0e-38 162.5 174 47.7
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 3.9e-38 162.2 174 47.7
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 3.9e-38 162.2 180 45.6
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 3.9e-38 162.2 174 46.0
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 3.9e-38 162.2 174 46.6
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 3.9e-38 162.2 174 47.1
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 3.9e-38 162.2 174 47.7
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 5.1e-38 161.8 174 47.1
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 5.1e-38 161.8 174 47.1
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.1e-37 160.6 174 47.1
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 1.5e-37 160.2 174 47.1
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 1.9e-37 159.8 177 45.2
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 1.9e-37 159.8 175 46.9
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 1.9e-37 159.8 174 47.7
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 2.5e-37 159.5 174 46.0
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 4.3e-37 158.7 173 49.7
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 4.3e-37 158.7 173 47.4
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 5.6e-37 158.3 174 46.6
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 5.6e-37 158.3 174 44.8
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 5.6e-37 158.3 174 46.6
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.2e-36 157.1 174 45.4
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.2e-36 157.1 174 45.4
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 1.2e-36 157.1 174 45.4
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 1.2e-36 157.1 247 41.3
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 1.2e-36 157.1 201 42.8
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 1.6e-36 156.8 174 46.0
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 3.6e-36 155.6 175 45.1
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 8.1e-36 154.5 174 44.8
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 8.1e-36 154.5 176 43.8
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 1.1e-35 154.1 174 44.8
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 1.8e-35 153.3 176 44.3
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 2.3e-35 152.9 176 44.3
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 2.3e-35 152.9 175 44.6
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 3.1e-35 152.5 175 45.7
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 3.1e-35 152.5 174 45.4
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 4.0e-35 152.1 177 44.1
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 8.9e-35 151.0 174 44.3
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 8.9e-35 151.0 174 43.1
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 1.2e-34 150.6 176 45.5
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 1.2e-34 150.6 174 44.3
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 1.5e-34 150.2 137 53.3
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 1.5e-34 150.2 134 54.5
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 2.6e-34 149.4 174 45.4
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 3.4e-34 149.1 176 44.3
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 7.6e-34 147.9 180 42.8
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 9.9e-34 147.5 180 43.3
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 2.2e-33 146.4 175 45.1
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 4.9e-33 145.2 178 41.6
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 8.4e-33 144.4 178 41.0
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 1.1e-32 144.1 176 43.2
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 1.4e-32 143.7 174 43.1
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 1.9e-32 143.3 117 59.8
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 3.2e-32 142.5 204 40.7
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 5.4e-32 141.7 174 43.7
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 1.6e-31 140.2 174 42.0
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 1.6e-31 140.2 119 57.1
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 3.5e-31 139.0 174 42.0
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 3.0e-30 136.0 171 40.4
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 5.1e-30 135.2 178 39.3
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 1.6e-28 130.2 114 54.4
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 4.7e-28 128.6 138 43.5
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 8.1e-28 127.9 145 45.5
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 4.0e-27 125.6 84 66.7
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 5.2e-27 125.2 169 42.6
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 8.9e-27 124.4 89 64.0
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 8.9e-27 124.4 89 64.0
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 2.0e-26 123.2 90 65.6
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 3.4e-26 122.5 88 63.6
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 5.8e-26 121.7 180 42.2
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 9.9e-26 120.9 123 48.8
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 1.3e-25 120.6 174 39.1
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.1e-24 117.5 137 45.3
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 1.4e-24 117.1 89 60.7
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 4.2e-24 115.5 192 35.4
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 1.6e-23 113.6 123 46.3
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 1.6e-23 113.6 141 39.7
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 4.6e-23 112.1 213 35.2
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 1.9e-21 106.7 165 38.8
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 1.9e-16 90.1 98 48.0
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.3e-09 67.4 93 38.7
SEGI_00674 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 5.5e-08 62.0 55 54.5


User provided reference genes

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