Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 4.6e-98 361.3 192 100.0
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 8.0e-18 94.7 223 34.1
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 2.3e-17 93.2 196 35.2
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 5.2e-17 92.0 235 34.5
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 8.9e-17 91.3 219 35.6
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.2e-16 90.9 213 34.3
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 3.4e-16 89.4 229 32.8
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 7.5e-16 88.2 239 35.1
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 1.7e-15 87.0 210 37.1
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 3.7e-15 85.9 237 32.5
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 3.7e-15 85.9 228 36.0
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 6.3e-15 85.1 195 35.4
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 8.3e-15 84.7 228 32.9
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 1.4e-14 84.0 223 33.6
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 1.4e-14 84.0 235 33.2
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 2.4e-14 83.2 234 34.6
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.1e-14 82.8 220 34.1
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 3.1e-14 82.8 218 34.4
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 4.1e-14 82.4 231 31.2
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 7.0e-14 81.6 211 34.6
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 9.2e-14 81.3 196 34.7
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 9.2e-14 81.3 232 32.3
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 1.6e-13 80.5 221 34.8
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.6e-13 80.5 221 34.8
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.6e-13 80.5 221 34.8
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 2.0e-13 80.1 230 32.2
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 2.0e-13 80.1 231 31.6
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 2.0e-13 80.1 220 32.7
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 5.9e-13 78.6 234 32.1
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 7.8e-13 78.2 245 31.4
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 7.8e-13 78.2 233 32.6
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 7.8e-13 78.2 237 31.6
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 7.8e-13 78.2 238 31.5
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 1.0e-12 77.8 226 32.7
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.0e-12 77.8 212 32.1
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 1.3e-12 77.4 236 34.3
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 1.3e-12 77.4 231 31.2
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.7e-12 77.0 221 33.9
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 2.9e-12 76.3 241 32.4
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 3.8e-12 75.9 232 31.9
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 3.8e-12 75.9 207 33.8
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 6.6e-12 75.1 224 32.1
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 1.1e-11 74.3 216 32.9
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 1.5e-11 73.9 228 31.6
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 1.5e-11 73.9 232 31.9
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 1.5e-11 73.9 226 31.4
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 1.9e-11 73.6 215 32.6
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 1.9e-11 73.6 215 34.4
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 1.9e-11 73.6 219 31.5
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 1.9e-11 73.6 213 32.4
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.3e-11 72.8 235 31.1
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 4.3e-11 72.4 202 32.7
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 4.3e-11 72.4 224 30.4
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 5.6e-11 72.0 234 29.5
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 5.6e-11 72.0 232 32.8
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 9.5e-11 71.2 235 31.1
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 1.2e-10 70.9 237 30.4
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 1.6e-10 70.5 225 30.7
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 2.1e-10 70.1 240 29.2
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 2.8e-10 69.7 226 29.6
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 2.8e-10 69.7 218 31.2
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 4.7e-10 68.9 214 31.8
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 4.7e-10 68.9 229 32.8
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 6.1e-10 68.6 188 34.0
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 8.0e-10 68.2 220 31.4
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 8.0e-10 68.2 230 33.0
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 1.8e-09 67.0 220 30.9
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 1.8e-09 67.0 231 29.4
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 2.3e-09 66.6 227 26.4
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 2.3e-09 66.6 228 29.8
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 3.1e-09 66.2 227 30.0
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 6.8e-09 65.1 217 32.3
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 6.8e-09 65.1 225 28.4
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 1.2e-08 64.3 230 30.9
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 2.0e-08 63.5 213 28.2
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 2.0e-08 63.5 187 31.6
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 2.0e-08 63.5 220 29.5
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 2.0e-08 63.5 227 30.8
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 2.6e-08 63.2 274 26.6
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 4.4e-08 62.4 234 30.8
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 4.4e-08 62.4 111 39.6
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 7.5e-08 61.6 125 40.8
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 1.3e-07 60.8 214 29.9
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 1.3e-07 60.8 227 30.8
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 2.9e-07 59.7 223 27.8
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 2.9e-07 59.7 219 28.3
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 3.7e-07 59.3 104 41.3
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 1.1e-06 57.8 230 28.3
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 1.1e-06 57.8 126 35.7
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 1.1e-06 57.8 97 44.3
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 1.4e-06 57.4 94 42.6
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 1.9e-06 57.0 56 51.8
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.9e-06 57.0 218 28.4
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 1.9e-06 57.0 199 28.6
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 2.4e-06 56.6 219 28.3
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 3.2e-06 56.2 227 27.8
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 4.1e-06 55.8 202 29.7
SMO143G0152 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 4.1e-06 55.8 73 52.1


User provided reference genes

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