Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO343G0028 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 3.7e-78 294.7 133 100.0
SMO367G0213 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 1.4e-61 239.6 114 96.5
SMO367G1212 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 2.3e-56 222.2 157 70.1
SMO367G0055 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 6.7e-56 220.7 157 70.7
SMO367G0934 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 6.7e-56 220.7 157 70.7
Nn7g38390 Nelumbo nucifera HOM05D005479 ORTHO05D007756 3.1e-37 158.7 114 63.2
QL03p025023 Quercus lobata HOM05D005479 ORTHO05D007756 4.1e-37 158.3 114 58.8
Aqoxy1G01374 Aquilegia oxysepala HOM05D005479 ORTHO05D007756 1.2e-36 156.8 114 59.6
MD12G1238800 Malus domestica HOM05D005479 ORTHO05D007756 1.2e-36 156.8 114 58.8
Os07g0497400 Oryza sativa ssp. japonica HOM05D005479 ORTHO05D007756 1.2e-36 156.8 114 57.9
CiPaw.07G065500 Carya illinoinensis HOM05D005479 ORTHO05D007756 2.6e-36 155.6 114 57.9
Lj7A489G24 Lonicera japonica HOM05D005479 ORTHO05D007756 3.5e-36 155.2 116 59.5
AL8G23370 Arabidopsis lyrata HOM05D005479 ORTHO05D007756 5.9e-36 154.5 114 57.0
AT5G49570 Arabidopsis thaliana HOM05D005479 ORTHO05D007756 5.9e-36 154.5 114 57.9
Haze_04347 Corylus avellana HOM05D005479 ORTHO05D007756 5.9e-36 154.5 122 55.7
SalBow4G0205 Salvia bowleyana HOM05D005479 ORTHO05D007756 5.9e-36 154.5 114 58.8
A06p38260 Brassica napus HOM05D005479 ORTHO05D007756 1.0e-35 153.7 114 57.9
BraA06t26741Z Brassica rapa HOM05D005479 ORTHO05D007756 1.0e-35 153.7 114 57.9
Aa31LG11G8350 Aethionema arabicum HOM05D005479 ORTHO05D007756 2.2e-35 152.5 114 57.0
CSS0032146 Camellia sinensis var. sinensis HOM05D005479 ORTHO05D007756 2.2e-35 152.5 114 58.8
CsaV3_2G004220 Cucumis sativus L. HOM05D005479 ORTHO05D007756 2.2e-35 152.5 114 57.0
Sp2g19870 Schrenkiella parvula HOM05D005479 ORTHO05D007756 2.2e-35 152.5 114 57.0
TAR624G0950 Trochodendron aralioides HOM05D005479 ORTHO05D007756 2.9e-35 152.1 114 57.0
C07p39970 Brassica napus HOM05D005479 ORTHO05D007756 3.8e-35 151.8 114 57.0
BolC7t44530H Brassica oleracea HOM05D005479 ORTHO05D007756 3.8e-35 151.8 114 57.0
Carub.0008s0944 Capsella rubella HOM05D005479 ORTHO05D007756 3.8e-35 151.8 114 56.1
Zm00001eb105420 Zea mays HOM05D005479 ORTHO05D007756 3.8e-35 151.8 114 57.9
MELO3C004372.2 Cucumis melo HOM05D005479 ORTHO05D007756 5.0e-35 151.4 114 56.1
Rhsim07G0075700 Rhododendron simsii HOM05D005479 ORTHO05D007756 5.0e-35 151.4 114 57.9
Ciclev10000348m.g Citrus clementina HOM05D005479 ORTHO05D007756 6.5e-35 151.0 114 55.3
PGR004G2522 Punica granatum HOM05D005479 ORTHO05D007756 6.5e-35 151.0 114 58.8
Gorai.007G283500 Gossypium raimondii HOM05D005479 ORTHO05D007756 8.5e-35 150.6 114 57.9
GSVIVG01021825001 Vitis vinifera HOM05D005479 ORTHO05D007756 8.5e-35 150.6 114 56.1
EL10Ac4g09118 Beta vulgaris HOM05D005479 ORTHO05D007756 1.1e-34 150.2 114 56.1
Thhalv10003714m.g Eutrema salsugineum HOM05D005479 ORTHO05D007756 1.1e-34 150.2 114 55.3
AUR62004929 Chenopodium quinoa HOM05D005479 ORTHO05D007756 1.5e-34 149.8 114 55.3
Gohir.D11G263500 Gossypium hirsutum HOM05D005479 ORTHO05D007756 1.5e-34 149.8 114 57.9
SEGI_17604 Sequoiadendron giganteum HOM05D005479 ORTHO05D007756 1.5e-34 149.8 113 57.5
ATR0763G186 Amborella trichopoda HOM05D005479 ORTHO05D007756 1.9e-34 149.4 118 55.1
COL.COLO4_15310 Corchorus olitorius HOM05D005479 ORTHO05D007756 1.9e-34 149.4 118 54.2
Solyc01g097440.3 Solanum lycopersicum HOM05D005479 ORTHO05D007756 1.9e-34 149.4 114 55.3
Sopen01g041110 Solanum pennellii HOM05D005479 ORTHO05D007756 2.5e-34 149.1 114 55.3
Dinv20863 Davidia involucrata HOM05D005479 ORTHO05D007756 3.2e-34 148.7 114 55.3
Hma1.2p1_0083F.1_g042810 Hydrangea macrophylla HOM05D005479 ORTHO05D007756 3.2e-34 148.7 114 56.1
Manes.08G133100 Manihot esculenta HOM05D005479 ORTHO05D007756 3.2e-34 148.7 114 56.1
SalBow4G0458 Salvia bowleyana HOM05D005479 ORTHO05D007756 3.2e-34 148.7 118 56.8
Sed0025675 Sechium edule HOM05D005479 ORTHO05D007756 3.2e-34 148.7 114 56.1
unitig_21.g20055 Utricularia gibba HOM05D005479 ORTHO05D007756 3.2e-34 148.7 114 57.0
Duzib177G1118 Durio zibethinus HOM05D005479 ORTHO05D007756 4.2e-34 148.3 114 56.1
Migut.N01906 Erythranthe guttata HOM05D005479 ORTHO05D007756 4.2e-34 148.3 114 57.0
PSO675G4284 Papaver somniferum HOM05D005479 ORTHO05D007756 4.2e-34 148.3 114 56.1
CDE11G1080 Ceratophyllum demersum HOM05D005479 ORTHO05D007756 5.5e-34 147.9 114 57.9
Glyma.03G246500 Glycine max HOM05D005479 ORTHO05D007756 5.5e-34 147.9 114 57.0
Potri.013G039600 Populus trichocarpa HOM05D005479 ORTHO05D007756 5.5e-34 147.9 114 55.3
THA.LOC104818635 Tarenaya hassleriana HOM05D005479 ORTHO05D007756 5.5e-34 147.9 114 55.3
CAN.G134.108 Capsicum annuum HOM05D005479 ORTHO05D007756 7.2e-34 147.5 114 55.3
Atru.chr2.800 Acer truncatum HOM05D005479 ORTHO05D007756 9.4e-34 147.1 115 56.5
Eucgr.H04378 Eucalyptus grandis HOM05D005479 ORTHO05D007756 9.4e-34 147.1 113 58.4
Thecc.05G286400 Theobroma cacao HOM05D005479 ORTHO05D007756 9.4e-34 147.1 114 57.9
Sabra13G0037000 Salix brachista HOM05D005479 ORTHO05D007756 1.2e-33 146.7 114 54.4
Cpa.g.sc117.80 Carica papaya HOM05D005479 ORTHO05D007756 1.6e-33 146.4 114 54.4
Eucgr.H04377 Eucalyptus grandis HOM05D005479 ORTHO05D007756 1.6e-33 146.4 117 54.7
TWI74G0680 Tripterygium wilfordii HOM05D005479 ORTHO05D007756 1.6e-33 146.4 114 54.4
Glyma.19G243900 Glycine max HOM05D005479 ORTHO05D007756 2.1e-33 146.0 114 56.1
DCAR_029737 Daucus carota HOM05D005479 ORTHO05D007756 2.7e-33 145.6 113 54.9
ECA232G3664 Erigeron canadensis HOM05D005479 ORTHO05D007756 2.7e-33 145.6 114 53.5
CANSAT54G0735 Cannabis sativa HOM05D005479 ORTHO05D007756 3.6e-33 145.2 114 55.3
HanXRQChr09g0254821 Helianthus annuus HOM05D005479 ORTHO05D007756 3.6e-33 145.2 114 54.4
Ca_09415_v3 Cicer arietinum L. HOM05D005479 ORTHO05D007756 4.7e-33 144.8 118 54.2
Gohir.A11G253600 Gossypium hirsutum HOM05D005479 ORTHO05D007756 4.7e-33 144.8 114 55.3
PSO541G1403 Papaver somniferum HOM05D005479 ORTHO05D007756 4.7e-33 144.8 114 55.3
Sc09g0003880 Simmondsia chinensis HOM05D005479 ORTHO05D007756 6.1e-33 144.4 114 55.3
VMungo0540G0884 Vigna mungo HOM05D005479 ORTHO05D007756 8.0e-33 144.1 114 55.3
Phvul.006G100800 Phaseolus vulgaris HOM05D005479 ORTHO05D007756 1.0e-32 143.7 114 56.1
CARHR287990 Cardamine hirsuta HOM05D005479 ORTHO05D007756 1.4e-32 143.3 114 53.5
Psat3g007760 Pisum sativum HOM05D005479 ORTHO05D007756 1.4e-32 143.3 114 56.1
Lj1g0002084 Lotus japonicus HOM05D005479 ORTHO05D007756 1.8e-32 142.9 114 55.3
Prupe.6G341700 Prunus persica HOM05D005479 ORTHO05D007756 2.3e-32 142.5 114 54.4
Prupe.6G342000 Prunus persica HOM05D005479 ORTHO05D007756 2.3e-32 142.5 114 54.4
Cc02_g31990 Coffea canephora HOM05D005479 ORTHO05D007756 3.0e-32 142.1 114 54.4
Medtr7g114940 Medicago truncatula HOM05D005479 ORTHO05D007756 3.0e-32 142.1 114 56.1
arahy.Tifrunner.gnm1.ann1.9C3ED3 Arachis hypogaea HOM05D005479 ORTHO05D007756 4.0e-32 141.7 114 54.4
Lalb_Chr15g0076821 Lupinus albus HOM05D005479 ORTHO05D007756 5.2e-32 141.4 114 56.1
TPR.G7013 Trifolium pratense HOM05D005479 ORTHO05D007756 6.8e-32 141.0 114 55.3
FvH4_6g03130 Fragaria vesca HOM05D005479 ORTHO05D007756 8.8e-32 140.6 114 54.4
FAN14G5841 Fragaria x ananassa HOM05D005479 ORTHO05D007756 8.8e-32 140.6 114 54.4
Actinidia05775 Actinidia chinensis HOM05D005479 ORTHO05D007756 1.2e-31 140.2 114 54.4
arahy.Tifrunner.gnm1.ann1.A0PUBP Arachis hypogaea HOM05D005479 ORTHO05D007756 1.5e-31 139.8 114 54.4
Lsat_1_v5_gn_4_140660 Lactuca sativa HOM05D005479 ORTHO05D007756 2.0e-31 139.4 114 53.5
FAN05G1441 Fragaria x ananassa HOM05D005479 ORTHO05D007756 5.7e-31 137.9 114 53.5
FAN05G3323 Fragaria x ananassa HOM05D005479 ORTHO05D007756 5.7e-31 137.9 114 53.5
Eucgr.H04379 Eucalyptus grandis HOM05D005479 ORTHO05D007756 9.7e-31 137.1 119 52.9
CBR_g7957 Chara braunii HOM05D005479 ORTHO05D007756 2.2e-30 136.0 99 59.6
Mapoly0021s0092 Marchantia polymorpha HOM05D005479 ORTHO05D007756 2.2e-30 136.0 114 55.3
RcHm_v2.0_Chr3g0451381 Rosa chinensis HOM05D005479 ORTHO05D007756 1.1e-29 133.7 114 53.5
ClCG02G016550 Citrullus lanatus HOM05D005479 ORTHO05D007756 2.4e-29 132.5 142 45.1
Pp3c4_6120 Physcomitrium patens HOM05D005479 ORTHO05D007756 4.1e-29 131.7 114 54.4
AUR62001022 Chenopodium quinoa HOM05D005479 ORTHO05D007756 6.5e-27 124.4 86 57.0
SGA_v2.0_scaffold81G26086 Striga asiatica HOM05D005479 ORTHO05D007756 6.5e-27 124.4 93 55.9
SHI18393 Sapria himalayana HOM05D005479 ORTHO05D007756 2.5e-26 122.5 112 52.7
Peaxi162Scf00282g00225 Petunia axillaris HOM05D005479 ORTHO05D007756 4.2e-26 121.7 114 50.0
Nitab4.5_0004469g0060 Nicotiana tabacum HOM05D005479 ORTHO05D007756 2.1e-25 119.4 114 48.2
FAN09G3553 Fragaria x ananassa HOM05D005479 ORTHO05D007756 1.0e-24 117.1 86 57.0
Nitab4.5_0005582g0050 Nicotiana tabacum HOM05D005479 ORTHO05D007756 5.2e-24 114.8 114 46.5
MCO12G063 Micromonas commoda HOM05D005479 ORTHO05D007756 9.8e-23 110.5 93 50.5
Hund22122 Selenicereus undatus HOM05D005479 ORTHO05D007756 4.1e-21 105.1 69 59.4
Cre01.g053900 Chlamydomonas reinhardtii HOM05D005479 ORTHO05D007756 2.8e-17 92.4 98 46.9
Cfa027061 Carpinus fangiana HOM05D005479 ORTHO05D007756 3.0e-16 89.0 90 43.3
Cfa006446 Carpinus fangiana HOM05D005479 ORTHO05D007756 1.5e-15 86.7 51 64.7
Hma1.2p1_0083F.1_g042820 Hydrangea macrophylla HOM05D005479 ORTHO05D007756 3.4e-15 85.5 48 66.7
PRCOL_00003670 Prasinoderma coloniale HOM05D005479 ORTHO05D007756 2.8e-14 82.4 93 45.2
vmacro13830 Vaccinium macrocarpon HOM05D005479 ORTHO05D007756 1.0e-11 73.9 65 53.8
Ah.06g192270 Amaranthus hybridus HOM05D005479 ORTHO05D007756 1.9e-10 69.7 65 49.2
VMungo0464G1033 Vigna mungo HOM05D000010 ORTHO05D000063 1.6e-09 66.6 57 49.1
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 4.7e-09 65.1 61 42.6
FAN02G1208 Fragaria x ananassa HOM05D000352 ORTHO05D000260 1.8e-08 63.2 65 46.2
TAR624G0835 Trochodendron aralioides HOM05D005479 ORTHO05D007756 3.1e-08 62.4 56 51.8
TAR624G0794 Trochodendron aralioides HOM05D005479 ORTHO05D007756 7.5e-07 57.8 42 54.8
TAR624G1307 Trochodendron aralioides HOM05D005479 ORTHO05D007756 4.9e-06 55.1 30 70.0


User provided reference genes

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