Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO343G0003 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 8.5e-111 403.7 202 100.0
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 2.4e-33 146.4 102 74.5
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 5.8e-11 72.0 83 43.4
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 5.8e-11 72.0 83 43.4
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 7.6e-11 71.6 86 43.0
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 6.5e-10 68.6 81 46.9
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 8.4e-10 68.2 81 44.4
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 1.9e-09 67.0 88 40.9
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 5.5e-09 65.5 81 38.3
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 7.1e-09 65.1 89 37.1
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 9.3e-09 64.7 82 43.9
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 9.3e-09 64.7 82 43.9
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 9.3e-09 64.7 81 42.0
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 9.3e-09 64.7 97 36.1
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 1.2e-08 64.3 82 43.9
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.2e-08 64.3 82 43.9
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.2e-08 64.3 82 43.9
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 1.6e-08 63.9 92 39.1
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 1.6e-08 63.9 82 39.0
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 2.1e-08 63.5 82 40.2
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 2.1e-08 63.5 86 40.7
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.1e-08 63.5 81 40.7
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.1e-08 63.5 82 43.9
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 2.1e-08 63.5 82 39.0
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 2.1e-08 63.5 86 37.2
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 2.1e-08 63.5 81 43.2
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 2.7e-08 63.2 82 39.0
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 3.5e-08 62.8 121 28.9
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 4.6e-08 62.4 102 34.3
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 4.6e-08 62.4 97 35.1
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 4.6e-08 62.4 81 37.0
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 4.6e-08 62.4 83 36.1
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 6.1e-08 62.0 96 35.4
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 6.1e-08 62.0 84 39.3
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 6.1e-08 62.0 82 37.8
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 6.1e-08 62.0 80 43.8
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 7.9e-08 61.6 87 37.9
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 7.9e-08 61.6 86 36.0
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 7.9e-08 61.6 81 39.5
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.0e-07 61.2 97 36.1
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.0e-07 61.2 84 35.7
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 1.0e-07 61.2 88 36.4
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 1.0e-07 61.2 82 39.0
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 1.0e-07 61.2 85 36.5
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 1.3e-07 60.8 82 36.6
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 1.3e-07 60.8 86 37.2
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 1.3e-07 60.8 83 36.1
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 1.3e-07 60.8 96 35.4
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 1.3e-07 60.8 96 35.4
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 1.3e-07 60.8 83 38.6
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 1.8e-07 60.5 80 41.2
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 1.8e-07 60.5 83 36.1
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 2.3e-07 60.1 83 34.9
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 2.3e-07 60.1 83 36.1
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 3.0e-07 59.7 86 34.9
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 3.0e-07 59.7 87 36.8
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 3.0e-07 59.7 100 36.0
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 3.0e-07 59.7 83 36.1
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 3.0e-07 59.7 84 38.1
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 3.0e-07 59.7 82 39.0
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 3.0e-07 59.7 82 36.6
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 3.9e-07 59.3 83 36.1
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 3.9e-07 59.3 83 36.1
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 3.9e-07 59.3 87 36.8
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 3.9e-07 59.3 83 36.1
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 5.1e-07 58.9 96 34.4
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 5.1e-07 58.9 83 34.9
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 5.1e-07 58.9 78 38.5
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 6.7e-07 58.5 86 36.0
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 8.7e-07 58.2 83 36.1
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 8.7e-07 58.2 81 38.3
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 8.7e-07 58.2 81 38.3
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 8.7e-07 58.2 86 36.0
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 8.7e-07 58.2 82 36.6
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 1.5e-06 57.4 93 32.3
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 1.5e-06 57.4 84 36.9
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 1.5e-06 57.4 85 37.6
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 2.5e-06 56.6 87 35.6
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 2.5e-06 56.6 81 34.6
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 3.3e-06 56.2 86 39.5
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 3.3e-06 56.2 87 35.6
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 3.3e-06 56.2 82 39.0
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 4.3e-06 55.8 87 32.2
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 4.3e-06 55.8 87 35.6
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 4.3e-06 55.8 87 35.6
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 4.3e-06 55.8 83 36.1
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 5.7e-06 55.5 81 37.0
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 5.7e-06 55.5 87 34.5
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 5.7e-06 55.5 87 34.5
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 5.7e-06 55.5 87 34.5
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 5.7e-06 55.5 94 38.3
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 5.7e-06 55.5 81 33.3
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 5.7e-06 55.5 88 34.1
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 7.4e-06 55.1 81 32.1
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 9.7e-06 54.7 81 33.3


User provided reference genes

Program Settings