Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 8.6e-268 926.4 461 100.0
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 6.0e-213 744.2 466 74.2
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.9e-197 690.6 460 68.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 5.1e-196 688.0 454 69.2
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 6.7e-196 687.6 462 71.2
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 9.7e-195 683.7 458 67.7
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.1e-193 680.2 460 67.6
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 3.1e-193 678.7 454 67.0
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.1e-193 678.3 460 67.2
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 5.3e-193 677.9 456 68.2
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.5e-192 676.4 454 67.2
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 7.7e-192 674.1 476 64.9
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.0e-191 673.7 462 66.5
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.0e-191 673.7 462 66.0
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.7e-191 672.9 454 67.8
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 2.9e-191 672.2 454 67.2
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 3.8e-191 671.8 454 67.2
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 8.5e-191 670.6 458 66.2
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.1e-190 670.2 462 65.8
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.9e-190 669.5 454 66.7
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.5e-190 669.1 454 67.4
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.5e-190 669.1 454 66.1
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.5e-190 669.1 465 69.7
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.5e-190 669.1 457 66.7
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 3.2e-190 668.7 458 65.9
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 3.2e-190 668.7 462 66.0
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 5.5e-190 667.9 454 66.7
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 5.5e-190 667.9 454 66.7
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 5.5e-190 667.9 454 66.7
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 5.5e-190 667.9 454 66.5
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.2e-189 666.8 458 65.9
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.2e-189 666.8 454 66.1
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 3.6e-189 665.2 454 66.5
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 3.6e-189 665.2 452 68.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 7.9e-189 664.1 454 66.5
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 7.9e-189 664.1 462 64.9
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-188 663.7 454 65.9
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.0e-188 663.7 454 66.3
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.3e-188 662.5 454 66.1
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 2.3e-188 662.5 452 67.7
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 3.0e-188 662.1 454 65.4
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 3.9e-188 661.8 454 66.1
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 3.9e-188 661.8 454 67.8
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 5.1e-188 661.4 455 66.4
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.1e-187 660.2 454 65.4
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.5e-187 659.8 454 65.0
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 2.0e-187 659.4 455 65.7
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 4.4e-187 658.3 454 65.2
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 9.7e-187 657.1 461 65.9
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.3e-186 656.8 454 66.3
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.7e-186 656.4 454 65.6
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.2e-186 656.0 463 66.7
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 8.2e-186 654.1 454 67.8
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.8e-185 652.9 454 67.6
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.8e-185 652.9 462 64.7
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 3.1e-185 652.1 454 65.4
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.1e-185 651.7 454 67.6
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 5.3e-185 651.4 454 67.6
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 5.3e-185 651.4 478 62.6
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 7.0e-185 651.0 454 67.6
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 7.0e-185 651.0 454 64.8
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 7.0e-185 651.0 455 64.4
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.6e-184 649.8 459 64.7
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.6e-184 649.8 462 64.5
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.6e-184 649.8 455 67.3
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.6e-184 649.8 455 67.5
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.0e-184 649.4 454 65.4
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 3.5e-184 648.7 454 65.2
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 3.5e-184 648.7 454 65.2
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 3.5e-184 648.7 454 68.5
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 1.0e-183 647.1 454 64.3
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.3e-183 646.7 450 66.2
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 5.0e-183 644.8 457 64.3
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.1e-182 643.7 454 64.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.5e-182 643.3 454 64.5
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.2e-181 640.2 454 63.7
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.6e-181 639.8 454 63.9
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 8.0e-181 637.5 481 63.6
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 8.0e-181 637.5 454 63.4
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 5.3e-177 624.8 451 62.7
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.6e-176 623.2 454 65.0
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.0e-175 620.5 454 61.0
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 1.5e-174 616.7 454 65.2
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.3e-172 609.4 457 63.7
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.2e-171 607.1 500 57.4
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.4e-169 599.4 454 60.8
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.0e-167 594.0 454 62.1
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.7e-167 593.2 454 60.4
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.2e-160 570.5 454 57.9
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 4.5e-160 568.5 394 65.7
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 7.7e-160 567.8 498 55.2
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.4e-145 520.4 458 55.0
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 3.5e-144 515.8 340 75.3
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.1e-142 510.8 344 68.3
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.5e-142 509.6 340 67.6
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 8.9e-140 501.1 339 69.6
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.4e-139 498.8 340 66.8
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 6.4e-138 495.0 344 66.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 6.4e-138 495.0 344 66.0
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.9e-137 493.4 340 68.2
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.5e-136 489.2 341 64.5
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-135 487.6 341 64.8
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 8.6e-135 484.6 341 64.8
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.1e-133 479.9 324 67.6
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-125 454.1 294 68.7
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.6e-125 452.6 294 72.8
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 8.1e-125 451.4 292 73.3
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.3e-122 444.1 339 64.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 7.3e-118 428.3 277 69.0
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 7.1e-113 411.8 295 62.7
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.5e-110 403.3 285 64.2
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.2e-105 386.3 280 63.6
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 4.3e-102 375.9 473 39.7
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 3.7e-93 346.3 487 37.6
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.7e-56 223.8 152 61.8
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 9.8e-46 188.7 175 51.4
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.4e-37 159.5 94 73.4
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.4e-37 159.5 94 73.4
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-36 158.3 94 72.3
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 7.0e-28 129.4 105 61.0


User provided reference genes

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